RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 MT-CO2P00403 227 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 OR5AC1P0C628 307 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 PET100P0DJ07 73 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 MT1HL1P0DM35 61 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 IGKV1-13P0DP09 117 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 NKX2-5P52952 324 aaPredicted RBP3.46□□□□□ -1.86
CKAP4-203ENST00000553039 KRTAP10-4P60372 401 aaPredicted RBP3.46□□□□□ -1.86
CKAP4-203ENST00000553039 RPL30P62888 115 aaKnown RBP3.46□□□□□ -1.86
CKAP4-203ENST00000553039 ERHP84090 104 aaKnown RBP3.46□□□□□ -1.86
CKAP4-203ENST00000553039 CATR1Q13166 79 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 RIGQ13278 110 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 MSMO1Q15800 293 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 ZNF493Q6ZR52 646 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 ZNF818PQ6ZRF7 136 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 Q6ZSA8 131 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 LGI3Q8N145 548 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 C10orf126Q8N4M7 172 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 Q8N814 137 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 IGF2BP2-AS1Q96M15 143 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 LINC00052Q96N35 136 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 LINC01587Q99440 93 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 CHAC1Q9BUX1 264 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 NMES1Q9C002 83 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 TMEM222Q9H0R3 208 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 SAV1Q9H4B6 383 aaPredicted RBP3.46□□□□□ -1.86
CKAP4-203ENST00000553039 CCL28Q9NRJ3 127 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 COX11Q9Y6N1 276 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 TRAV30A0A087WSZ9 112 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 FXYD6-FXYD2A0A087WZ82 144 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 DUXBA0A1W2PPF3 345 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 ARPC5O15511 151 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 TNFSF12O43508 249 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 PGLYRP1O75594 196 aaPredicted RBP3.45□□□□□ -1.86
CKAP4-203ENST00000553039 SIX6O95475 246 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 IGLV2-8P01709 118 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 F2RP25116 425 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 UCP1P25874 307 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 RPL37AP61513 92 aaKnown RBP3.45□□□□□ -1.86
CKAP4-203ENST00000553039 ERVK-16P61578 105 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 POU2AF1Q16633 256 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 SP6Q3SY56 376 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 LELP1Q5T871 98 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 Q6ZRG5 221 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 SPAG16Q8N0X2 631 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 C9orf62Q8N4C0 152 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 SLC35G3Q8N808 338 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 ZNF709Q8N972 641 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 OR51H1Q8NH63 302 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 Q8WTZ3 238 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 IL22RA2Q969J5 263 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 TP53RKQ96S44 253 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 PRNDQ9UKY0 176 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 RPH3ALQ9UNE2 315 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 HSPB11Q9Y547 144 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 OR51B2Q9Y5P1 312 aa3.45□□□□□ -1.86
CKAP4-203ENST00000553039 A0A1B0GU03 582 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 LRCOL1A6NCL2 159 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 ZNF98A6NK75 572 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 HMSDA8MTL9 139 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 SNURFLB1AK76 121 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 G3V3Q6 166 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 ATG12O94817 140 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 CDS2O95674 445 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 TOMM40O96008 361 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 PRSS2P07478 247 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 STAG3L3P0CL85 134 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 SLC25A4P12235 298 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 SUB1P53999 127 aaKnown RBP eCLIP3.44□□□□□ -1.86
CKAP4-203ENST00000553039 TAS2R60P59551 318 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 SEC61GP60059 68 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 S100A10P60903 97 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 ZNF345Q14585 488 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 SMCO1Q147U7 214 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 IAH1Q2TAA2 248 aaPredicted RBP3.44□□□□□ -1.86
CKAP4-203ENST00000553039 FAM78BQ5VT40 261 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 SAMD13Q5VXD3 122 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 Q6ZVQ6 151 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 SCXQ7RTU7 201 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 TMEM144Q7Z5S9 345 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 LINC00518Q8N0U6 118 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 TMEM256Q8N2U0 113 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 INO80EQ8NBZ0 244 aaPredicted RBP3.44□□□□□ -1.86
CKAP4-203ENST00000553039 RNASE11Q8TAA1 199 aaKnown RBP3.44□□□□□ -1.86
CKAP4-203ENST00000553039 GLYATL2Q8WU03 294 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 PPP1R1CQ8WVI7 109 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 C16orf74Q96GX8 76 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 SEC22AQ96IW7 307 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 C2orf50Q96LR7 162 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 SLC35B3Q9H1N7 401 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 GSKIPQ9P0R6 139 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 MBD2Q9UBB5 411 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 TMEM56-RWDD3S4R434 201 aa3.44□□□□□ -1.86
CKAP4-203ENST00000553039 A0A096LPF7 62 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 A0A0D9SG52 128 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 WRBO00258 174 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 DUSP14O95147 198 aaKnown RBP3.43□□□□□ -1.86
CKAP4-203ENST00000553039 MPC2O95563 127 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 INSP01308 110 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 IGLV2-11P01706 119 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 IGHV3-48P01763 117 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms