RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 OVOL1O14753 267 aa10.06□□□□□ -0.8
CPSF7-223ENST00000544669 VAMP3Q15836 100 aa10.06□□□□□ -0.8
CPSF7-223ENST00000544669 CCDC140Q96MF4 163 aa10.06□□□□□ -0.8
CPSF7-223ENST00000544669 BPESC1Q9GZL8 116 aa10.06□□□□□ -0.8
CPSF7-223ENST00000544669 MEGF9Q9H1U4 602 aa10.06□□□□□ -0.8
CPSF7-223ENST00000544669 PEF1Q9UBV8 284 aaKnown RBP10.06□□□□□ -0.8
CPSF7-223ENST00000544669 MAP1BP46821 2468 aaKnown RBP10.06□□□□□ -0.8
CPSF7-223ENST00000544669 A0A096LNJ9 63 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 CLPSL1A2RUU4 121 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 K7EMI3 77 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 NDUFA4O00483 81 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 NPYP01303 97 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 Q8N8P6 123 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 OR4C5Q8NGB2 326 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 PIMREGQ9BSJ6 248 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 AGPAT4-IT1Q9H0P7 198 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 RIF1Q5UIP0 2472 aaKnown RBP10.05□□□□□ -0.8
CPSF7-223ENST00000544669 APC2O95996 2303 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 K7EP13 123 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 TNFRSF6BO95407 300 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 IGF1P05019 195 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 TMEM97Q5BJF2 176 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 C8orf86Q6ZUL3 223 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 Q71RC1 249 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-223ENST00000544669 BOD1L2Q8IYS8 172 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 RNF185Q96GF1 192 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 C16orf92Q96LL3 132 aa10.05□□□□□ -0.8
CPSF7-223ENST00000544669 ZFHX2Q9C0A1 2572 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-223ENST00000544669 IGHV1-69DA0A0B4J2H0 117 aa10.04□□□□□ -0.8
CPSF7-223ENST00000544669 PPP1R17O96001 155 aa10.04□□□□□ -0.8
CPSF7-223ENST00000544669 IGHV1-69P01742 117 aa10.04□□□□□ -0.8
CPSF7-223ENST00000544669 MRAP2Q96G30 205 aa10.04□□□□□ -0.8
CPSF7-223ENST00000544669 AP1S3Q96PC3 154 aa10.04□□□□□ -0.8
CPSF7-223ENST00000544669 A1L4Q6 167 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 SMAD7O15105 426 aaKnown RBP10.03□□□□□ -0.8
CPSF7-223ENST00000544669 NDUFS7O75251 213 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 HSD52Q0P140 79 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 C19orf54Q5BKX5 351 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 PRR31Q5SQ13 230 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 PRSS57Q6UWY2 283 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 IL17RELQ6ZVW7 336 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 ITLN2Q8WWU7 325 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-223ENST00000544669 PSMG3-AS1Q96PY0 264 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 GVINP1Q7Z2Y8 2422 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 PCNX1Q96RV3 2341 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 ANKHD1Q8IWZ3 2542 aaKnown RBP10.03□□□□□ -0.8
CPSF7-223ENST00000544669 ANKRD11Q6UB99 2663 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-223ENST00000544669 A0A0G2JLM5 398 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 LINC01549A6NIU2 74 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 CCL25O15444 150 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 SNAI2O43623 268 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 TRGV3P03979 118 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 MED14OSP0DP75 135 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 ARL3P36405 182 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 ERCC8Q13216 396 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 OR10J6PQ8NGY7 276 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 MYOZ3Q8TDC0 251 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
CPSF7-223ENST00000544669 TRAV21A0A0B4J279 112 aa10.02□□□□□ -0.81
CPSF7-223ENST00000544669 G3V318 75 aa10.02□□□□□ -0.81
CPSF7-223ENST00000544669 TAX1BP3O14907 124 aa10.02□□□□□ -0.81
CPSF7-223ENST00000544669 HLA-DMBP28068 263 aa10.02□□□□□ -0.81
CPSF7-223ENST00000544669 LEPP41159 167 aa10.02□□□□□ -0.81
CPSF7-223ENST00000544669 SRSF1Q07955 248 aaKnown RBP eCLIP10.02□□□□□ -0.81
CPSF7-223ENST00000544669 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
CPSF7-223ENST00000544669 OR2K2Q8NGT1 345 aa10.02□□□□□ -0.81
CPSF7-223ENST00000544669 GLMPQ8WWB7 406 aa10.02□□□□□ -0.81
CPSF7-223ENST00000544669 TRAV8-2A0A0B4J237 113 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 IGKV3D-20A0A0C4DH25 116 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 IGHV3-35A0A0C4DH35 117 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 MUC21A0A0G2JKD1 596 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 MUC21A0A140T8X8 626 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 PRAC2D3DTV9 90 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 KIR3DS1Q14943 382 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 MUC21Q5SSG8 566 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 SPANXN1Q5VSR9 72 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 IGFL4Q6B9Z1 124 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 PRORYQ9H606 182 aa10.01□□□□□ -0.81
CPSF7-223ENST00000544669 A0A1W2PPR1 153 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 H3BRM9 83 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 NCR2O95944 276 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 PRSS1P07477 247 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 LOXL1Q08397 574 aaPredicted RBP10□□□□□ -0.81
CPSF7-223ENST00000544669 FAM106AQ4KMX7 169 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 GTF2H5Q6ZYL4 71 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 RNF182Q8N6D2 247 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 ZMAT4Q9H898 229 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 HIGD1BQ9P298 99 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 ZNF580Q9UK33 172 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 NBEAQ8NFP9 2946 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 FGF6P10767 208 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 EVI2AP22794 236 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 LAGE3Q14657 143 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 C2orf91Q6ZV80 131 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 ZNF575Q86XF7 245 aa10□□□□□ -0.81
CPSF7-223ENST00000544669 IGHG2P01859 326 aa9.99□□□□□ -0.81
CPSF7-223ENST00000544669 GATA3P23771 443 aa9.99□□□□□ -0.81
CPSF7-223ENST00000544669 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
CPSF7-223ENST00000544669 C20orf78Q9BR46 151 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms