RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 FABP5P3A8MUU1 101 aa10.68□□□□□ -0.7
VPS33A-208ENST00000543633 K7EP34 96 aa10.68□□□□□ -0.7
VPS33A-208ENST00000543633 KLF17Q5JT82 389 aaPredicted RBP10.68□□□□□ -0.7
VPS33A-208ENST00000543633 MINOS1Q5TGZ0 78 aa10.68□□□□□ -0.7
VPS33A-208ENST00000543633 BCL6BQ8N143 479 aaPredicted RBP10.68□□□□□ -0.7
VPS33A-208ENST00000543633 RNF185Q96GF1 192 aa10.68□□□□□ -0.7
VPS33A-208ENST00000543633 HILPDAQ9Y5L2 63 aa10.68□□□□□ -0.7
VPS33A-208ENST00000543633 MINOS1-NBL1R4GNA1 71 aa10.68□□□□□ -0.7
VPS33A-208ENST00000543633 FCER1GP30273 86 aa10.67□□□□□ -0.7
VPS33A-208ENST00000543633 HES1Q14469 280 aa10.67□□□□□ -0.7
VPS33A-208ENST00000543633 OR5A1Q8NGJ0 315 aa10.67□□□□□ -0.7
VPS33A-208ENST00000543633 VPS25Q9BRG1 176 aa10.67□□□□□ -0.7
VPS33A-208ENST00000543633 SMPXQ9UHP9 88 aa10.67□□□□□ -0.7
VPS33A-208ENST00000543633 IGHG4P01861 327 aa10.67□□□□□ -0.7
VPS33A-208ENST00000543633 ZNF80P51504 273 aaPredicted RBP10.67□□□□□ -0.7
VPS33A-208ENST00000543633 FOXE3Q13461 319 aa10.67□□□□□ -0.7
VPS33A-208ENST00000543633 KIR3DS1Q14943 382 aa10.67□□□□□ -0.7
VPS33A-208ENST00000543633 SLC50A1Q9BRV3 221 aa10.67□□□□□ -0.7
VPS33A-208ENST00000543633 SMAD5-AS1Q9Y6J3 95 aa10.67□□□□□ -0.7
VPS33A-208ENST00000543633 RP1L1Q8IWN7 2480 aaPredicted RBP10.66□□□□□ -0.7
VPS33A-208ENST00000543633 CTSGP08311 255 aa10.66□□□□□ -0.7
VPS33A-208ENST00000543633 NDPQ00604 133 aa10.66□□□□□ -0.7
VPS33A-208ENST00000543633 KLRB1Q12918 225 aa10.66□□□□□ -0.7
VPS33A-208ENST00000543633 MRPL53Q96EL3 112 aaKnown RBP10.66□□□□□ -0.7
VPS33A-208ENST00000543633 VGLL1Q99990 258 aa10.66□□□□□ -0.7
VPS33A-208ENST00000543633 SNAI2O43623 268 aa10.65□□□□□ -0.7
VPS33A-208ENST00000543633 ATP5LO75964 103 aa10.65□□□□□ -0.7
VPS33A-208ENST00000543633 S4R3C0 116 aa10.65□□□□□ -0.7
VPS33A-208ENST00000543633 ATRXP46100 2492 aa10.65□□□□□ -0.7
VPS33A-208ENST00000543633 A0A0G2JLM5 398 aa10.65□□□□□ -0.71
VPS33A-208ENST00000543633 KLRD1Q13241 179 aa10.65□□□□□ -0.71
VPS33A-208ENST00000543633 ZNF575Q86XF7 245 aa10.65□□□□□ -0.71
VPS33A-208ENST00000543633 Q8TAT8 98 aa10.65□□□□□ -0.71
VPS33A-208ENST00000543633 JMJD8Q96S16 334 aa10.65□□□□□ -0.71
VPS33A-208ENST00000543633 TMEM8BA6NDV4 472 aa10.64□□□□□ -0.71
VPS33A-208ENST00000543633 PRSS47A8MTI9 375 aa10.64□□□□□ -0.71
VPS33A-208ENST00000543633 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
VPS33A-208ENST00000543633 EVI2AP22794 236 aa10.64□□□□□ -0.71
VPS33A-208ENST00000543633 UQCRFS1P47985 274 aa10.64□□□□□ -0.71
VPS33A-208ENST00000543633 ODF1Q14990 250 aa10.64□□□□□ -0.71
VPS33A-208ENST00000543633 VMO1Q7Z5L0 202 aa10.64□□□□□ -0.71
VPS33A-208ENST00000543633 OR2K2Q8NGT1 345 aa10.64□□□□□ -0.71
VPS33A-208ENST00000543633 FAM110DQ8TAY7 271 aaPredicted RBP10.64□□□□□ -0.71
VPS33A-208ENST00000543633 PKDREJQ9NTG1 2253 aa10.64□□□□□ -0.71
VPS33A-208ENST00000543633 TNFRSF6BO95407 300 aa10.63□□□□□ -0.71
VPS33A-208ENST00000543633 ORM1P02763 201 aa10.63□□□□□ -0.71
VPS33A-208ENST00000543633 Q8N8P6 123 aa10.63□□□□□ -0.71
VPS33A-208ENST00000543633 HIF1ANQ9NWT6 349 aa10.63□□□□□ -0.71
VPS33A-208ENST00000543633 SPTA1P02549 2419 aa10.63□□□□□ -0.71
VPS33A-208ENST00000543633 H3BUT2 72 aa10.63□□□□□ -0.71
VPS33A-208ENST00000543633 NMUP48645 174 aa10.63□□□□□ -0.71
VPS33A-208ENST00000543633 PRSS57Q6UWY2 283 aa10.63□□□□□ -0.71
VPS33A-208ENST00000543633 ZNF502Q8TBZ5 544 aa10.63□□□□□ -0.71
VPS33A-208ENST00000543633 DKK2Q9UBU2 259 aa10.63□□□□□ -0.71
VPS33A-208ENST00000543633 PKD1L2Q7Z442 2459 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 A0A1W2PPM0 123 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 TMEM11P17152 192 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 LEPP41159 167 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 IL17RELQ6ZVW7 336 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 LINC01560Q8TB33 94 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 ZFAND3Q9H8U3 227 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 IGHV7-81A0A0B4J1V7 117 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 NCBP2LA6PVI3 153 aaKnown RBP10.62□□□□□ -0.71
VPS33A-208ENST00000543633 IGKCP01834 107 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 SRSF1Q07955 248 aaKnown RBP eCLIP10.62□□□□□ -0.71
VPS33A-208ENST00000543633 PCP2Q8IVA1 136 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 DYNAPQ8N1N2 210 aa10.62□□□□□ -0.71
VPS33A-208ENST00000543633 ROS1P08922 2347 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 RELNP78509 3460 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 ADGRG4Q8IZF6 3080 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 ABCA1O95477 2261 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 KALRNO60229 2985 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 DPM2O94777 84 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 SMIM17P0DL12 118 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 LY6DQ14210 128 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 C11orf71Q6IPW1 123 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 POLEQ07864 2286 aa10.61□□□□□ -0.71
VPS33A-208ENST00000543633 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 BUB3O43684 328 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 GOSR1O95249 250 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 FXYD7P58549 80 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 HHLA3Q9XRX5 114 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 IGHV4-4A0A075B6R2 117 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 SMIM13P0DJ93 91 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 PRB4P10163 310 aaPredicted RBP10.6□□□□□ -0.71
VPS33A-208ENST00000543633 FABP2P12104 132 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 HLA-DMBP28068 263 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 Q8N9W7 124 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 CSTL1Q9H114 145 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 MSRB1Q9NZV6 116 aa10.6□□□□□ -0.71
VPS33A-208ENST00000543633 IGHV3-23P01764 117 aa10.59□□□□□ -0.71
VPS33A-208ENST00000543633 TAL2Q16559 108 aa10.59□□□□□ -0.71
VPS33A-208ENST00000543633 DTX2Q86UW9 622 aa10.59□□□□□ -0.71
VPS33A-208ENST00000543633 ATP6V0BQ99437 205 aa10.59□□□□□ -0.71
VPS33A-208ENST00000543633 CHAC1Q9BUX1 264 aa10.59□□□□□ -0.71
VPS33A-208ENST00000543633 MEGF9Q9H1U4 602 aa10.59□□□□□ -0.71
VPS33A-208ENST00000543633 SPCS1Q9Y6A9 102 aa10.59□□□□□ -0.71
VPS33A-208ENST00000543633 FAM90A27PA6NNH2 459 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms