RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 SHISA9B4DS77 424 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 IGLC2P0DOY2 106 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 IGLC3P0DOY3 106 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 GUSBP1Q15486 140 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 Q6ZVH6 145 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 CCL19Q99731 98 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 BPESC1Q9GZL8 116 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 G3V318 75 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 NPSP0C0P6 89 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 LINC00311Q8N616 119 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 ZFYVE26Q68DK2 2539 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 TMEM262E9PQX1 116 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 DPM2O94777 84 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 PRTN3P24158 256 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 ST20Q9HBF5 79 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 IGLL1P15814 213 aa11.52□□□□□ -0.56
GCFC2-211ENST00000541687 FAM167A-AS1Q96KT0 104 aa11.52□□□□□ -0.56
GCFC2-211ENST00000541687 K7ENP7 123 aa11.52□□□□□ -0.57
GCFC2-211ENST00000541687 IGHV4-39P01824 125 aa11.52□□□□□ -0.57
GCFC2-211ENST00000541687 BCL6BQ8N143 479 aaPredicted RBP11.52□□□□□ -0.57
GCFC2-211ENST00000541687 RNF5Q99942 180 aa11.52□□□□□ -0.57
GCFC2-211ENST00000541687 NACAE9PAV3 2078 aa11.52□□□□□ -0.57
GCFC2-211ENST00000541687 SAA4P35542 130 aa11.52□□□□□ -0.57
GCFC2-211ENST00000541687 SAMD5Q5TGI4 173 aa11.52□□□□□ -0.57
GCFC2-211ENST00000541687 MTURNQ8N3F0 131 aa11.52□□□□□ -0.57
GCFC2-211ENST00000541687 STPG4Q8N801 248 aa11.52□□□□□ -0.57
GCFC2-211ENST00000541687 OR4X2Q8NGF9 303 aa11.52□□□□□ -0.57
GCFC2-211ENST00000541687 CD7P09564 240 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 EIF4EBP1Q13541 118 aaPredicted RBP11.51□□□□□ -0.57
GCFC2-211ENST00000541687 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 NCKAP5O14513 1909 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 TRAV2A0A0B4J234 112 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 ZNF815PA8K554 130 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 ZNF562Q6V9R5 426 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 FAM231DQ6ZW35 169 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 ZNF503Q96F45 646 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 NPFFO15130 113 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 THAP8Q8NA92 274 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 SIGMAR1Q99720 223 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 GTSF1LQ9H1H1 148 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 TMEM75Q8N9X5 138 aa11.51□□□□□ -0.57
GCFC2-211ENST00000541687 CGB3P0DN86 165 aa11.5□□□□□ -0.57
GCFC2-211ENST00000541687 CGB7P0DN87 165 aa11.5□□□□□ -0.57
GCFC2-211ENST00000541687 HLA-DMBP28068 263 aa11.5□□□□□ -0.57
GCFC2-211ENST00000541687 ITLN2Q8WWU7 325 aaPredicted RBP11.5□□□□□ -0.57
GCFC2-211ENST00000541687 VCX2Q9H322 139 aa11.5□□□□□ -0.57
GCFC2-211ENST00000541687 A0A0G2JLM5 398 aa11.5□□□□□ -0.57
GCFC2-211ENST00000541687 PAX8Q06710 450 aa11.5□□□□□ -0.57
GCFC2-211ENST00000541687 TEX43Q6ZNM6 134 aa11.5□□□□□ -0.57
GCFC2-211ENST00000541687 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
GCFC2-211ENST00000541687 ARHGAP32A7KAX9 2087 aa11.5□□□□□ -0.57
GCFC2-211ENST00000541687 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
GCFC2-211ENST00000541687 CYSLTR1Q9Y271 337 aa11.49□□□□□ -0.57
GCFC2-211ENST00000541687 IGHV1-24A0A0C4DH33 117 aa11.49□□□□□ -0.57
GCFC2-211ENST00000541687 SEC11AP67812 179 aa11.49□□□□□ -0.57
GCFC2-211ENST00000541687 KAAG1Q9UBP8 84 aa11.49□□□□□ -0.57
GCFC2-211ENST00000541687 ATP6V0E1O15342 81 aa11.49□□□□□ -0.57
GCFC2-211ENST00000541687 HOXA3O43365 443 aaPredicted RBP11.49□□□□□ -0.57
GCFC2-211ENST00000541687 RUSC1-AS1Q66K80 236 aa11.49□□□□□ -0.57
GCFC2-211ENST00000541687 TRBV7-9A0A0J9YWB2 115 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 IGKCP01834 107 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 HSD52Q0P140 79 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 ZNF491Q8N8L2 437 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 TRAV41A0A0B4J266 112 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 M0R1W7 72 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 CKS1BP61024 79 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 UBE2V1Q13404 147 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 CR1LQ2VPA4 569 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 LINC00173Q6ZV60 143 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 DUX3Q96PT4 197 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 EFNA4P52798 201 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 SRSF1Q07955 248 aaKnown RBP eCLIP11.48□□□□□ -0.577e-11■□□□□ 11
GCFC2-211ENST00000541687 GAGE13Q4V321 117 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 OR5A1Q8NGJ0 315 aa11.48□□□□□ -0.57
GCFC2-211ENST00000541687 ZNF492Q9P255 531 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 H7C1H1 209 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 IGKV1-17P01599 117 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 TCF15Q12870 199 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 ZC2HC1BQ5TFG8 222 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 SIGLEC15Q6ZMC9 328 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 COL4A2P08572 1712 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 GAGE12BA1L429 117 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 PRSS46E5RG02 174 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 PPBPP02775 128 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 GNLYP22749 145 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 LYPD1Q8N2G4 141 aa11.47□□□□□ -0.57
GCFC2-211ENST00000541687 TEX29Q8N6K0 151 aa11.46□□□□□ -0.57
GCFC2-211ENST00000541687 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.57
GCFC2-211ENST00000541687 LCNL1Q6ZST4 164 aa11.46□□□□□ -0.57
GCFC2-211ENST00000541687 VGLL1Q99990 258 aa11.46□□□□□ -0.57
GCFC2-211ENST00000541687 KIR2DL5BA0A0G2JN68 375 aa11.46□□□□□ -0.58
GCFC2-211ENST00000541687 KIR2DL5BA0A0G2JPC4 375 aa11.46□□□□□ -0.58
GCFC2-211ENST00000541687 H3BUX3 64 aa11.46□□□□□ -0.58
GCFC2-211ENST00000541687 KIR2DL5AQ8N109 375 aa11.46□□□□□ -0.58
GCFC2-211ENST00000541687 EXPH5Q8NEV8 1989 aa11.46□□□□□ -0.58
GCFC2-211ENST00000541687 PSMG4Q5JS54 123 aa11.46□□□□□ -0.58
GCFC2-211ENST00000541687 MINOS1Q5TGZ0 78 aa11.46□□□□□ -0.58
GCFC2-211ENST00000541687 ANAPC13Q9BS18 74 aa11.46□□□□□ -0.58
GCFC2-211ENST00000541687 MINOS1-NBL1R4GNA1 71 aa11.46□□□□□ -0.58
GCFC2-211ENST00000541687 IGLV2-23P01705 113 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms