RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ZNF492Q9P255 531 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 LTBP4Q8N2S1 1624 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 H3BMG7 143 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 OVOL3O00110 214 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 NDUFS6O75380 124 aaKnown RBP12.42□□□□□ -0.42
HMGA2-210ENST00000541363 SBF2Q86WG5 1849 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 IGKV1-9A0A0C4DH69 117 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 ATOX1O00244 68 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 NTN3O00634 580 aaPredicted RBP12.42□□□□□ -0.42
HMGA2-210ENST00000541363 B5MCH6 92 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 MUSTN1Q8IVN3 82 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 IGHV4-4A0A075B6R2 117 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 IGKV1OR2-108A0A075B7D4 117 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 LGALS9BQ3B8N2 356 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 LGALS9CQ6DKI2 356 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 VSIG2Q96IQ7 327 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 NYNRINQ9P2P1 1898 aaKnown RBP12.41□□□□□ -0.42
HMGA2-210ENST00000541363 TIMM17AQ99595 171 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 J3KT08 172 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 CDKN1BP46527 198 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 NMSQ5H8A3 153 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 MST1LQ2TV78 715 aa12.41□□□□□ -0.42
HMGA2-210ENST00000541363 MRPL51Q4U2R6 128 aaKnown RBP12.41□□□□□ -0.42
HMGA2-210ENST00000541363 TIRAPP58753 221 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 IGKV1-39P01597 117 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 IGKV1D-39P04432 117 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 SAA4P35542 130 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 IGFBPL1Q8WX77 278 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 TAF1LQ8IZX4 1826 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 FOXF2Q12947 444 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 XCL1P47992 114 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 HGFACQ04756 655 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 MBD3L4A6NDZ8 208 aaPredicted RBP12.4□□□□□ -0.42
HMGA2-210ENST00000541363 MBD3L3A6NE82 208 aaPredicted RBP12.4□□□□□ -0.42
HMGA2-210ENST00000541363 MBD3L5A6NJ08 208 aaPredicted RBP12.4□□□□□ -0.42
HMGA2-210ENST00000541363 J3QQQ9 107 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 GATA3P23771 443 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 MBD3L2Q8NHZ7 208 aaPredicted RBP12.4□□□□□ -0.42
HMGA2-210ENST00000541363 C20orf144Q9BQM9 153 aa12.4□□□□□ -0.42
HMGA2-210ENST00000541363 TRAV26-2A0A0B4J265 109 aa12.39□□□□□ -0.43
HMGA2-210ENST00000541363 BRK1Q8WUW1 75 aa12.39□□□□□ -0.43
HMGA2-210ENST00000541363 HERV-K104P63124 156 aa12.39□□□□□ -0.43
HMGA2-210ENST00000541363 WNK2Q9Y3S1 2297 aa12.39□□□□□ -0.43
HMGA2-210ENST00000541363 F8VRH5 84 aa12.39□□□□□ -0.43
HMGA2-210ENST00000541363 ZNF134P52741 427 aa12.39□□□□□ -0.43
HMGA2-210ENST00000541363 A0A096LPF7 62 aa12.39□□□□□ -0.43
HMGA2-210ENST00000541363 NREPQ16612 68 aa12.39□□□□□ -0.43
HMGA2-210ENST00000541363 CD177Q8N6Q3 437 aa12.39□□□□□ -0.43
HMGA2-210ENST00000541363 DYSFO75923 2080 aa12.39□□□□□ -0.43
HMGA2-210ENST00000541363 A0A0B4J2C4 111 aa12.38□□□□□ -0.43
HMGA2-210ENST00000541363 K7ERJ3 54 aa12.38□□□□□ -0.43
HMGA2-210ENST00000541363 FGFBP3Q8TAT2 258 aa12.38□□□□□ -0.43
HMGA2-210ENST00000541363 IGKV1D-8A0A087WSZ0 117 aa12.38□□□□□ -0.43
HMGA2-210ENST00000541363 C9orf47Q6ZRZ4 202 aa12.38□□□□□ -0.43
HMGA2-210ENST00000541363 C18orf32Q8TCD1 76 aa12.38□□□□□ -0.43
HMGA2-210ENST00000541363 SMIM20Q8N5G0 67 aa12.38□□□□□ -0.43
HMGA2-210ENST00000541363 SLC25A29Q8N8R3 303 aa12.38□□□□□ -0.43
HMGA2-210ENST00000541363 PRDM6Q9NQX0 595 aa12.38□□□□□ -0.43
HMGA2-210ENST00000541363 SIVA1O15304 175 aa12.38□□□□□ -0.43
HMGA2-210ENST00000541363 TGFBR3LH3BV60 316 aa12.37□□□□□ -0.43
HMGA2-210ENST00000541363 CYTL1Q9NRR1 136 aa12.37□□□□□ -0.43
HMGA2-210ENST00000541363 GAFA1Q96PS6 74 aa12.37□□□□□ -0.43
HMGA2-210ENST00000541363 PAQR4Q8N4S7 273 aaPredicted RBP12.37□□□□□ -0.43
HMGA2-210ENST00000541363 LAIR2Q6ISS4 152 aa12.37□□□□□ -0.43
HMGA2-210ENST00000541363 SDK2Q58EX2 2172 aa12.37□□□□□ -0.43
HMGA2-210ENST00000541363 NTN5Q8WTR8 489 aaPredicted RBP12.37□□□□□ -0.43
HMGA2-210ENST00000541363 SPACA3Q8IXA5 215 aa12.36□□□□□ -0.43
HMGA2-210ENST00000541363 COX7B2Q8TF08 81 aa12.36□□□□□ -0.43
HMGA2-210ENST00000541363 C15orf62A8K5M9 175 aa12.36□□□□□ -0.43
HMGA2-210ENST00000541363 LINC01545Q5VT33 79 aa12.36□□□□□ -0.43
HMGA2-210ENST00000541363 ARHGAP32A7KAX9 2087 aa12.36□□□□□ -0.43
HMGA2-210ENST00000541363 SPTSSBQ8NFR3 76 aa12.36□□□□□ -0.43
HMGA2-210ENST00000541363 LINC00479Q96M42 142 aa12.36□□□□□ -0.43
HMGA2-210ENST00000541363 C8orf86Q6ZUL3 223 aa12.36□□□□□ -0.43
HMGA2-210ENST00000541363 FAM110DQ8TAY7 271 aaPredicted RBP12.36□□□□□ -0.43
HMGA2-210ENST00000541363 MRPL36Q9P0J6 103 aaKnown RBP12.36□□□□□ -0.43
HMGA2-210ENST00000541363 NPYP01303 97 aa12.36□□□□□ -0.43
HMGA2-210ENST00000541363 RHOHQ15669 191 aa12.36□□□□□ -0.43
HMGA2-210ENST00000541363 NCOR1O75376 2440 aa12.35□□□□□ -0.43
HMGA2-210ENST00000541363 IGLV3-32A0A0A0MS00 114 aa12.35□□□□□ -0.43
HMGA2-210ENST00000541363 MRPL55Q7Z7F7 128 aaKnown RBP12.35□□□□□ -0.43
HMGA2-210ENST00000541363 Q9HAA7 133 aa12.35□□□□□ -0.43
HMGA2-210ENST00000541363 MRPL35Q9NZE8 188 aaKnown RBP12.35□□□□□ -0.43
HMGA2-210ENST00000541363 EFNA2O43921 213 aa12.35□□□□□ -0.43
HMGA2-210ENST00000541363 C12orf74Q32Q52 190 aa12.35□□□□□ -0.43
HMGA2-210ENST00000541363 UBE2AP49459 152 aa12.35□□□□□ -0.43
HMGA2-210ENST00000541363 CASC2Q6XLA1 102 aa12.35□□□□□ -0.43
HMGA2-210ENST00000541363 EIF4EBP2Q13542 120 aaPredicted RBP12.34□□□□□ -0.43
HMGA2-210ENST00000541363 RNASE13Q5GAN3 156 aaKnown RBP12.34□□□□□ -0.43
HMGA2-210ENST00000541363 DYNAPQ8N1N2 210 aa12.34□□□□□ -0.43
HMGA2-210ENST00000541363 LINC00473A8K010 186 aa12.34□□□□□ -0.43
HMGA2-210ENST00000541363 LHFPL1Q86WI0 220 aa12.34□□□□□ -0.43
HMGA2-210ENST00000541363 LYL1P12980 280 aa12.34□□□□□ -0.43
HMGA2-210ENST00000541363 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.43
HMGA2-210ENST00000541363 TAX1BP3O14907 124 aa12.33□□□□□ -0.44
HMGA2-210ENST00000541363 PLXNA2O75051 1894 aa12.33□□□□□ -0.44
HMGA2-210ENST00000541363 ABCA4P78363 2273 aa12.33□□□□□ -0.44
HMGA2-210ENST00000541363 TMEM131Q92545 1883 aa12.33□□□□□ -0.44
HMGA2-210ENST00000541363 IGLL5B9A064 214 aa12.33□□□□□ -0.44
HMGA2-210ENST00000541363 C20orf78Q9BR46 151 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 207.2 ms