RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 ARL3P36405 182 aa13.76□□□□□ -0.21
GNE-204ENST00000539208 ERCC8Q13216 396 aa13.76□□□□□ -0.21
GNE-204ENST00000539208 FER1L6-AS1Q8NA97 138 aa13.76□□□□□ -0.21
GNE-204ENST00000539208 RNF224P0DH78 156 aa13.76□□□□□ -0.21
GNE-204ENST00000539208 IGLC3P0DOY3 106 aa13.76□□□□□ -0.21
GNE-204ENST00000539208 C8orf86Q6ZUL3 223 aa13.76□□□□□ -0.21
GNE-204ENST00000539208 UQCR10Q9UDW1 63 aa13.76□□□□□ -0.21
GNE-204ENST00000539208 TRAV9-2A0A087WT02 112 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 TMEM213A2RRL7 107 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 GATA3P23771 443 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 LINC01559Q495D7 138 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 CNFNQ9BYD5 112 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 PPP1R14DQ9NXH3 145 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 IGHV3OR16-13A0A075B7E8 117 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 IGHV3-74A0A0B4J1X5 117 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 NDUFA4O00483 81 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 ZNF207O43670 478 aaKnown RBP13.75□□□□□ -0.21
GNE-204ENST00000539208 ZNF138P52744 262 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 LY6EQ16553 131 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 GLMPQ8WWB7 406 aa13.75□□□□□ -0.21
GNE-204ENST00000539208 SYS1-DBNDD2H3BUS1 97 aa13.74□□□□□ -0.21
GNE-204ENST00000539208 AGPAT4-IT1Q9H0P7 198 aa13.74□□□□□ -0.21
GNE-204ENST00000539208 DOPEY1Q5JWR5 2465 aa13.74□□□□□ -0.21
GNE-204ENST00000539208 ORM1P02763 201 aa13.73□□□□□ -0.21
GNE-204ENST00000539208 NUTF2P61970 127 aaKnown RBP13.73□□□□□ -0.21
GNE-204ENST00000539208 C9orf47Q6ZRZ4 202 aa13.73□□□□□ -0.21
GNE-204ENST00000539208 AP5S1Q9NUS5 200 aa13.73□□□□□ -0.21
GNE-204ENST00000539208 IGSF10Q6WRI0 2623 aa13.73□□□□□ -0.21
GNE-204ENST00000539208 IGHV3-49A0A0A0MS15 119 aa13.73□□□□□ -0.21
GNE-204ENST00000539208 HIST1H1AQ02539 215 aaPredicted RBP13.73□□□□□ -0.21
GNE-204ENST00000539208 IL17RELQ6ZVW7 336 aa13.73□□□□□ -0.21
GNE-204ENST00000539208 SPATA12Q7Z6I5 190 aa13.73□□□□□ -0.21
GNE-204ENST00000539208 ATOH7Q8N100 152 aa13.73□□□□□ -0.21
GNE-204ENST00000539208 HSPB8Q9UJY1 196 aa13.73□□□□□ -0.21
GNE-204ENST00000539208 CSN3P07498 182 aa13.72□□□□□ -0.21
GNE-204ENST00000539208 SLC25A16P16260 332 aa13.72□□□□□ -0.21
GNE-204ENST00000539208 TMEM78Q5T7P6 136 aa13.72□□□□□ -0.21
GNE-204ENST00000539208 AMN1Q8IY45 258 aa13.72□□□□□ -0.21
GNE-204ENST00000539208 ORMDL3Q8N138 153 aa13.72□□□□□ -0.21
GNE-204ENST00000539208 SVEP1Q4LDE5 3571 aa13.72□□□□□ -0.21
GNE-204ENST00000539208 D6R8Y8 96 aa13.72□□□□□ -0.21
GNE-204ENST00000539208 LINC00173Q6ZV60 143 aa13.72□□□□□ -0.21
GNE-204ENST00000539208 PRSS3P2Q8NHM4 247 aa13.72□□□□□ -0.21
GNE-204ENST00000539208 TMEM191AQ9H0A3 160 aa13.72□□□□□ -0.21
GNE-204ENST00000539208 TWIST1Q15672 202 aa13.71□□□□□ -0.21
GNE-204ENST00000539208 MRPL51Q4U2R6 128 aaKnown RBP13.71□□□□□ -0.21
GNE-204ENST00000539208 PET117Q6UWS5 81 aa13.71□□□□□ -0.21
GNE-204ENST00000539208 C9orf139Q6ZV77 190 aa13.71□□□□□ -0.21
GNE-204ENST00000539208 FA2HQ7L5A8 372 aa13.71□□□□□ -0.21
GNE-204ENST00000539208 PRELID3AQ96N28 172 aa13.71□□□□□ -0.21
GNE-204ENST00000539208 MAP1LC3CQ9BXW4 147 aa13.71□□□□□ -0.21
GNE-204ENST00000539208 ZNF580Q9UK33 172 aa13.71□□□□□ -0.21
GNE-204ENST00000539208 AVPP01185 164 aa13.71□□□□□ -0.22
GNE-204ENST00000539208 IGLV1-40P01703 118 aa13.71□□□□□ -0.22
GNE-204ENST00000539208 SSTP61278 116 aa13.71□□□□□ -0.22
GNE-204ENST00000539208 BLCAPP62952 87 aa13.71□□□□□ -0.22
GNE-204ENST00000539208 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
GNE-204ENST00000539208 TRBV12-3P01733 135 aa13.7□□□□□ -0.22
GNE-204ENST00000539208 MAJINQ3KP22 176 aa13.7□□□□□ -0.22
GNE-204ENST00000539208 UNQ9165/PRO28630Q6UXU0 137 aa13.7□□□□□ -0.22
GNE-204ENST00000539208 OR4C46A6NHA9 309 aa13.69□□□□□ -0.22
GNE-204ENST00000539208 OR10AG1Q8NH19 301 aa13.69□□□□□ -0.22
GNE-204ENST00000539208 C16orf92Q96LL3 132 aa13.69□□□□□ -0.22
GNE-204ENST00000539208 LENEPQ9Y5L5 61 aa13.69□□□□□ -0.22
GNE-204ENST00000539208 A0A0G2JLM5 398 aa13.69□□□□□ -0.22
GNE-204ENST00000539208 SIGLEC8Q9NYZ4 499 aa13.69□□□□□ -0.22
GNE-204ENST00000539208 MUC21A0A0G2JKD1 596 aa13.68□□□□□ -0.22
GNE-204ENST00000539208 MUC21A0A140T8X8 626 aa13.68□□□□□ -0.22
GNE-204ENST00000539208 IGLL1P15814 213 aa13.68□□□□□ -0.22
GNE-204ENST00000539208 IFI27P40305 119 aaPredicted RBP13.68□□□□□ -0.22
GNE-204ENST00000539208 CFHR3Q02985 330 aa13.68□□□□□ -0.22
GNE-204ENST00000539208 MUC21Q5SSG8 566 aa13.68□□□□□ -0.22
GNE-204ENST00000539208 KLK15Q9H2R5 256 aa13.68□□□□□ -0.22
GNE-204ENST00000539208 SPTAN1Q13813 2472 aaKnown RBP13.68□□□□□ -0.22
GNE-204ENST00000539208 SMAD7O15105 426 aaKnown RBP13.68□□□□□ -0.22
GNE-204ENST00000539208 PF4V1P10720 104 aa13.68□□□□□ -0.22
GNE-204ENST00000539208 LINC01356Q8N9X3 169 aa13.68□□□□□ -0.22
GNE-204ENST00000539208 IGKV3D-20A0A0C4DH25 116 aa13.67□□□□□ -0.22
GNE-204ENST00000539208 PPBPP02775 128 aa13.67□□□□□ -0.22
GNE-204ENST00000539208 Q6ZN92 141 aa13.67□□□□□ -0.22
GNE-204ENST00000539208 Q6ZS46 218 aa13.67□□□□□ -0.22
GNE-204ENST00000539208 OR4X2Q8NGF9 303 aa13.67□□□□□ -0.22
GNE-204ENST00000539208 ZNF747Q9BV97 191 aa13.67□□□□□ -0.22
GNE-204ENST00000539208 CKS2P33552 79 aa13.66□□□□□ -0.22
GNE-204ENST00000539208 GPHB5Q86YW7 130 aa13.66□□□□□ -0.22
GNE-204ENST00000539208 NPFFR1Q9GZQ6 430 aa13.66□□□□□ -0.22
GNE-204ENST00000539208 C11orf21Q9P2W6 132 aa13.66□□□□□ -0.22
GNE-204ENST00000539208 FLNCQ14315 2725 aa13.66□□□□□ -0.22
GNE-204ENST00000539208 A0A096LNT2 108 aa13.66□□□□□ -0.22
GNE-204ENST00000539208 SOCS3O14543 225 aa13.66□□□□□ -0.22
GNE-204ENST00000539208 HNRNPA3P51991 378 aaKnown RBP13.66□□□□□ -0.22
GNE-204ENST00000539208 NRGNQ92686 78 aa13.66□□□□□ -0.22
GNE-204ENST00000539208 RNF185Q96GF1 192 aa13.66□□□□□ -0.22
GNE-204ENST00000539208 ST20Q9HBF5 79 aa13.66□□□□□ -0.22
GNE-204ENST00000539208 MRPS16Q9Y3D3 137 aaKnown RBP13.66□□□□□ -0.22
GNE-204ENST00000539208 J3QLI3 93 aa13.65□□□□□ -0.22
GNE-204ENST00000539208 IGHV3-11P01762 117 aa13.65□□□□□ -0.22
GNE-204ENST00000539208 LINC01545Q5VT33 79 aa13.65□□□□□ -0.22
GNE-204ENST00000539208 C20orf173Q96LM9 149 aa13.65□□□□□ -0.22
GNE-204ENST00000539208 LINC00477Q96M19 166 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms