RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 PCM1Q15154 2024 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 ATG2AQ2TAZ0 1938 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 SCN4AP35499 1836 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 IGLV3-16A0A075B6K0 115 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 IGKV2D-26A0A0A0MRZ7 120 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 TRAV40A0A0B4J280 105 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 IGHV1-24A0A0C4DH33 117 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 C3orf85A0A1B0GTC6 90 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 MCRIP1C9JLW8 97 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 PITX3O75364 302 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 IGLV1-51P01701 117 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 BRS3P32247 399 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 LINC00471Q8N535 108 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 TTC9CQ8N5M4 171 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 PLPP5Q8NEB5 264 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 CXCL16Q9H2A7 254 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 NOP16Q9Y3C1 178 aaKnown RBP2.78□□□□□ -1.96
C11orf54-213ENST00000533585 V9GYS6 101 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 POLR1AO95602 1720 aaPredicted RBP2.78□□□□□ -1.96
C11orf54-213ENST00000533585 GCC2Q8IWJ2 1684 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 PTPN23Q9H3S7 1636 aa2.78□□□□□ -1.96
C11orf54-213ENST00000533585 UGGT2Q9NYU1 1516 aa2.78□□□□□ -1.97
C11orf54-213ENST00000533585 ARHGEF12Q9NZN5 1544 aa2.78□□□□□ -1.97
C11orf54-213ENST00000533585 GREB1Q4ZG55 1949 aa2.78□□□□□ -1.97
C11orf54-213ENST00000533585 POLA1P09884 1462 aaPredicted RBP2.77□□□□□ -1.97
C11orf54-213ENST00000533585 NCOA2Q15596 1464 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 PLEKHH2Q8IVE3 1493 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 TEX14Q8IWB6 1497 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 WDR90Q96KV7 1748 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 TRAV1-1A0A0B4J248 108 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 HMSDA8MTL9 139 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 ZNF705FA8MVS1 300 aaPredicted RBP2.77□□□□□ -1.97
C11orf54-213ENST00000533585 PROSCO94903 275 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 CRPP02741 224 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 ROMO1P60602 79 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 EIF4EBP1Q13541 118 aaPredicted RBP2.77□□□□□ -1.97
C11orf54-213ENST00000533585 ZNF345Q14585 488 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 ZNF826PQ6ZT77 177 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 C4orf33Q8N1A6 199 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 SLC50A1Q9BRV3 221 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 ABCA5Q8WWZ7 1642 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 LCTP09848 1927 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 IQGAP2Q13576 1575 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 COL27A1Q8IZC6 1860 aaPredicted RBP2.77□□□□□ -1.97
C11orf54-213ENST00000533585 KIAA0586Q9BVV6 1533 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 ADGRL2O95490 1459 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 SCAF11Q99590 1463 aaKnown RBP2.77□□□□□ -1.97
C11orf54-213ENST00000533585 SHANK2Q9UPX8 1470 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 AKAP12Q02952 1782 aa2.77□□□□□ -1.97
C11orf54-213ENST00000533585 SCAPERQ9BY12 1400 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 MYH9P35579 1960 aaKnown RBP2.76□□□□□ -1.97
C11orf54-213ENST00000533585 TP53BP1Q12888 1972 aaPredicted RBP2.76□□□□□ -1.97
C11orf54-213ENST00000533585 SCN9AQ15858 1988 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 MYH6P13533 1939 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 NESP48681 1621 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 KIF26AQ9ULI4 1882 aaPredicted RBP2.76□□□□□ -1.97
C11orf54-213ENST00000533585 NRKQ7Z2Y5 1582 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 LOC107984156A0A0G2JMH3 177 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 A6NN06 94 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 B4DSR2 109 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 BAALC-AS2P0C853 105 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 HINT1P49773 126 aaPredicted RBP2.76□□□□□ -1.97
C11orf54-213ENST00000533585 ZNF846Q147U1 533 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 C1orf134Q5TEV5 83 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 Q6AWC8 147 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 ATP11AUNQ6ZP68 121 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 ARL17AQ8IVW1 177 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 C9orf62Q8N4C0 152 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 OR8B3Q8NGG8 313 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 ATP6V0E2Q8NHE4 81 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 MUCL1Q96DR8 90 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 LINC00526Q96FQ7 95 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 Q96M85 177 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 KRTAP9-3Q9BYQ3 159 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 SCP2D1Q9UJQ7 156 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 TUBGCP6Q96RT7 1819 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 IFT140Q96RY7 1462 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 NSD3Q9BZ95 1437 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 ITSN2Q9NZM3 1697 aa2.76□□□□□ -1.97
C11orf54-213ENST00000533585 KIF13AQ9H1H9 1805 aa2.75□□□□□ -1.97
C11orf54-213ENST00000533585 ADGRB1O14514 1584 aa2.75□□□□□ -1.97
C11orf54-213ENST00000533585 HEATR5AQ86XA9 2040 aa2.75□□□□□ -1.97
C11orf54-213ENST00000533585 EPRSP07814 1512 aaKnown RBP2.75□□□□□ -1.97
C11orf54-213ENST00000533585 A0A1W2PRS3 328 aa2.75□□□□□ -1.97
C11orf54-213ENST00000533585 J3QLW9 94 aa2.75□□□□□ -1.97
C11orf54-213ENST00000533585 FOXI2Q6ZQN5 318 aa2.75□□□□□ -1.97
C11orf54-213ENST00000533585 OR4X2Q8NGF9 303 aa2.75□□□□□ -1.97
C11orf54-213ENST00000533585 LSM10Q969L4 123 aaKnown RBP2.75□□□□□ -1.97
C11orf54-213ENST00000533585 SMIM7Q9BQ49 75 aa2.75□□□□□ -1.97
C11orf54-213ENST00000533585 R4GN34 69 aa2.75□□□□□ -1.97
C11orf54-213ENST00000533585 MAGI1Q96QZ7 1491 aaPredicted RBP2.75□□□□□ -1.97
C11orf54-213ENST00000533585 QRICH2Q9H0J4 1663 aa2.74□□□□□ -1.97
C11orf54-213ENST00000533585 TCRBV3S1A0A5B6 114 aa2.74□□□□□ -1.97
C11orf54-213ENST00000533585 EDF1O60869 148 aaKnown RBP2.74□□□□□ -1.97
C11orf54-213ENST00000533585 ERHP84090 104 aaKnown RBP2.74□□□□□ -1.97
C11orf54-213ENST00000533585 OR2T2Q6IF00 324 aa2.74□□□□□ -1.97
C11orf54-213ENST00000533585 VSTM2AQ8TAG5 236 aa2.74□□□□□ -1.97
C11orf54-213ENST00000533585 TMEM254Q8TBM7 123 aa2.74□□□□□ -1.97
C11orf54-213ENST00000533585 C20orf166-AS1Q96NR2 134 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms