RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 VMA21Q3ZAQ7 101 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 FAM159AQ6UWV7 190 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 ZNF843Q8N446 348 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 OR9G1Q8NH87 305 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 KLF14Q8TD94 323 aaPredicted RBP5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 HIGD1BQ9P298 99 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 TRBV25-1A0A075B6N4 114 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 IGHV3OR16-10A0A075B7F0 116 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 FAM90A9PA6NNJ1 464 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 J3KT08 172 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 NDUFS7O75251 213 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 TNFRSF6BO95407 300 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 CRYGSP22914 178 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 SP5Q6BEB4 398 aaPredicted RBP5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 COLCA1Q6ZS62 124 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 C2orf91Q6ZV80 131 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 SEM1Q6ZVN7 128 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 CIARTQ8N365 385 aaPredicted RBP5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 ITLN1Q8WWA0 313 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 NPIPB11E5RHQ5 1161 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 ZNF56Q15929 161 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 IGFL2Q6UWQ7 119 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 C22orf34Q6ZV56 151 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 Q9H3A6 140 aa5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 GCN1Q92616 2671 aaKnown RBP5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 NCOA6Q14686 2063 aaPredicted RBP5.48□□□□□ -1.53
TGFBR3-209ENST00000532540 M0QXV9 152 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 IGHV3-48P01763 117 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 IGHV4-39P01824 125 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 ASPHD1Q5U4P2 390 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 GAGE2AQ6NT46 116 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 ZNF497Q6ZNH5 498 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 C3orf56Q8N813 242 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 REPIN1Q9BWE0 567 aaKnown RBP5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 EDA2RQ9HAV5 297 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 KIAA1549Q9HCM3 1950 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 ARFGEF3Q5TH69 2177 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 E9PLD3 99 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 PRSS2P07478 247 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 GLRXP35754 106 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 ODF1Q14990 250 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 C20orf204Q6ZNR8 217 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 RNASE6Q93091 150 aaKnown RBP5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 SPANXCQ9NY87 97 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 DYSFO75923 2080 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 WNT9BO14905 357 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 SS18L1O75177 396 aaPredicted RBP5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 TACC2O95359 2948 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 ARMS2P0C7Q2 107 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 LGALS3P17931 250 aaKnown RBP5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 S100A4P26447 101 aaKnown RBP5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 DKK2Q9UBU2 259 aa5.47□□□□□ -1.53
TGFBR3-209ENST00000532540 IGHV1-18A0A0C4DH31 117 aa5.46□□□□□ -1.53
TGFBR3-209ENST00000532540 MBD3L4A6NDZ8 208 aaPredicted RBP5.46□□□□□ -1.53
TGFBR3-209ENST00000532540 MBD3L3A6NE82 208 aaPredicted RBP5.46□□□□□ -1.53
TGFBR3-209ENST00000532540 MBD3L5A6NJ08 208 aaPredicted RBP5.46□□□□□ -1.53
TGFBR3-209ENST00000532540 C15orf61A6NNL5 157 aa5.46□□□□□ -1.53
TGFBR3-209ENST00000532540 MBD3L2Q8NHZ7 208 aaPredicted RBP5.46□□□□□ -1.53
TGFBR3-209ENST00000532540 ZNF714Q96N38 554 aa5.46□□□□□ -1.53
TGFBR3-209ENST00000532540 ZNF492Q9P255 531 aa5.46□□□□□ -1.53
TGFBR3-209ENST00000532540 F8P00451 2351 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 SLC25A20O43772 301 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 PLNP26678 52 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 ADORA2A-AS1P86434 159 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 RPL39P5Q59GN2 51 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 MOB3BQ86TA1 216 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 OR11H6Q8NGC7 330 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 SCGB3A1Q96QR1 104 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 TRAV40A0A0B4J280 105 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 MYMXA0A1B0GTQ4 84 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 C19orf84I3L1E1 186 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 NCR2O95944 276 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 XGP55808 180 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 CD69Q07108 199 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 PMVKQ15126 192 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 MRPL23Q16540 153 aaKnown RBP5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 ZNF329Q86UD4 541 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 ZNF295-AS1Q8N0V1 137 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 PTH2Q96A98 100 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 NABP1Q96AH0 204 aa5.46□□□□□ -1.54
TGFBR3-209ENST00000532540 K7EMI3 77 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 HAX1O00165 279 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 MGST3O14880 152 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 COX7A1P24310 79 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 DUTP33316 252 aaKnown RBP5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 SPANXN1Q5VSR9 72 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 C2orf82Q6UX34 121 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 CCL13Q99616 98 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 SPANXDQ9BXN6 97 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 CXXC4Q9H2H0 198 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 IGLV3-1P01715 115 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 TCRAP04437 139 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 LOXL3P58215 753 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 AMN1Q8IY45 258 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 HS3ST6Q96QI5 342 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 OTORQ9NRC9 128 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 IGHV3-21A0A0B4J1V1 117 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 NPYP01303 97 aa5.45□□□□□ -1.54
TGFBR3-209ENST00000532540 GATA3P23771 443 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms