RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 PAXXQ9BUH6 204 aa13.57□□□□□ -0.24
CAPN1-211ENST00000527739 BATF3Q9NR55 127 aa13.57□□□□□ -0.24
CAPN1-211ENST00000527739 IFNA5P01569 189 aa13.56□□□□□ -0.24
CAPN1-211ENST00000527739 RPL12P30050 165 aaKnown RBP13.56□□□□□ -0.24
CAPN1-211ENST00000527739 RNASE4P34096 147 aaKnown RBP13.56□□□□□ -0.24
CAPN1-211ENST00000527739 OR5I1Q13606 314 aa13.56□□□□□ -0.24
CAPN1-211ENST00000527739 LINC00336Q6ZUF6 198 aa13.56□□□□□ -0.24
CAPN1-211ENST00000527739 RNF141Q8WVD5 230 aa13.56□□□□□ -0.24
CAPN1-211ENST00000527739 LINC00477Q96M19 166 aa13.56□□□□□ -0.24
CAPN1-211ENST00000527739 MRPL32Q9BYC8 188 aaKnown RBP13.56□□□□□ -0.24
CAPN1-211ENST00000527739 AGPAT4-IT1Q9H0P7 198 aa13.56□□□□□ -0.24
CAPN1-211ENST00000527739 FUT9Q9Y231 359 aa13.56□□□□□ -0.24
CAPN1-211ENST00000527739 HSPB11Q9Y547 144 aa13.56□□□□□ -0.24
CAPN1-211ENST00000527739 PKHD1P08F94 4074 aa13.55□□□□□ -0.24
CAPN1-211ENST00000527739 IGKV2-40A0A087WW87 121 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-211ENST00000527739 GAGE12BA1L429 117 aa13.55□□□□□ -0.24
CAPN1-211ENST00000527739 OR7C2O60412 319 aa13.55□□□□□ -0.24
CAPN1-211ENST00000527739 GAGE7O76087 117 aa13.55□□□□□ -0.24
CAPN1-211ENST00000527739 IGKV2D-40P01614 121 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-211ENST00000527739 SLC25A5P05141 298 aaKnown RBP13.55□□□□□ -0.24
CAPN1-211ENST00000527739 GAGE12FP0CL80 117 aa13.55□□□□□ -0.24
CAPN1-211ENST00000527739 GAGE12GP0CL81 117 aa13.55□□□□□ -0.24
CAPN1-211ENST00000527739 GAGE12IP0CL82 117 aa13.55□□□□□ -0.24
CAPN1-211ENST00000527739 LGALS9BQ3B8N2 356 aa13.55□□□□□ -0.24
CAPN1-211ENST00000527739 FFAR4Q5NUL3 377 aa13.55□□□□□ -0.24
CAPN1-211ENST00000527739 C7orf71A4D174 169 aa13.54□□□□□ -0.24
CAPN1-211ENST00000527739 GPX1P07203 203 aa13.54□□□□□ -0.24
CAPN1-211ENST00000527739 TMEM78Q5T7P6 136 aa13.54□□□□□ -0.24
CAPN1-211ENST00000527739 PYGO2Q9BRQ0 406 aa13.54□□□□□ -0.24
CAPN1-211ENST00000527739 MBD2Q9UBB5 411 aa13.54□□□□□ -0.24
CAPN1-211ENST00000527739 DNAH11Q96DT5 4516 aa13.54□□□□□ -0.24
CAPN1-211ENST00000527739 CD300CQ08708 224 aa13.53□□□□□ -0.24
CAPN1-211ENST00000527739 BTN1A1Q13410 526 aa13.53□□□□□ -0.24
CAPN1-211ENST00000527739 VGLL1Q99990 258 aa13.53□□□□□ -0.24
CAPN1-211ENST00000527739 PRSS29PA6NIE9 313 aa13.52□□□□□ -0.25
CAPN1-211ENST00000527739 CSN1S1P47710 185 aa13.52□□□□□ -0.25
CAPN1-211ENST00000527739 RANP62826 216 aaKnown RBP13.52□□□□□ -0.25
CAPN1-211ENST00000527739 FXYD5Q96DB9 178 aa13.52□□□□□ -0.25
CAPN1-211ENST00000527739 C9orf47Q6ZRZ4 202 aa13.51□□□□□ -0.25
CAPN1-211ENST00000527739 PHYHIPLQ96FC7 376 aa13.51□□□□□ -0.25
CAPN1-211ENST00000527739 GSN-AS1Q9NRJ2 163 aa13.51□□□□□ -0.25
CAPN1-211ENST00000527739 PKD1P98161 4303 aa13.5□□□□□ -0.25
CAPN1-211ENST00000527739 A0A0J9YY99 117 aa13.5□□□□□ -0.25
CAPN1-211ENST00000527739 A0A1B0GVY2 172 aa13.5□□□□□ -0.25
CAPN1-211ENST00000527739 KLLNB2CW77 178 aa13.5□□□□□ -0.25
CAPN1-211ENST00000527739 RTL8CO15255 209 aa13.5□□□□□ -0.25
CAPN1-211ENST00000527739 CCL18P55774 89 aa13.5□□□□□ -0.25
CAPN1-211ENST00000527739 UBE2L3P68036 154 aaKnown RBP13.5□□□□□ -0.25
CAPN1-211ENST00000527739 GNPNAT1Q96EK6 184 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-211ENST00000527739 ALG5Q9Y673 324 aa13.5□□□□□ -0.25
CAPN1-211ENST00000527739 TRAV26-1A0A087WT03 109 aa13.49□□□□□ -0.25
CAPN1-211ENST00000527739 RGS13O14921 159 aa13.49□□□□□ -0.25
CAPN1-211ENST00000527739 ZNF324O75467 553 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-211ENST00000527739 EIF3GO75821 320 aaKnown RBP eCLIP13.49□□□□□ -0.25
CAPN1-211ENST00000527739 FAM3BP58499 235 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-211ENST00000527739 TAS2R45P59539 299 aa13.49□□□□□ -0.25
CAPN1-211ENST00000527739 KHDC3LQ587J8 217 aa13.49□□□□□ -0.25
CAPN1-211ENST00000527739 SOHLH1Q5JUK2 328 aa13.49□□□□□ -0.25
CAPN1-211ENST00000527739 Q6ZTI0 123 aa13.49□□□□□ -0.25
CAPN1-211ENST00000527739 EIF4E3Q8N5X7 224 aaKnown RBP13.49□□□□□ -0.25
CAPN1-211ENST00000527739 ZNF680Q8NEM1 530 aa13.49□□□□□ -0.25
CAPN1-211ENST00000527739 FAM19A4Q96LR4 140 aa13.49□□□□□ -0.25
CAPN1-211ENST00000527739 WFDC1Q9HC57 220 aa13.49□□□□□ -0.25
CAPN1-211ENST00000527739 TRGV2A0A075B6R0 118 aa13.48□□□□□ -0.25
CAPN1-211ENST00000527739 M6PRP20645 277 aa13.48□□□□□ -0.25
CAPN1-211ENST00000527739 ZNF138P52744 262 aa13.48□□□□□ -0.25
CAPN1-211ENST00000527739 DAZ2Q13117 558 aaKnown RBP13.48□□□□□ -0.25
CAPN1-211ENST00000527739 Q6ZR54 194 aa13.48□□□□□ -0.25
CAPN1-211ENST00000527739 LINC00612Q8N6U2 182 aa13.48□□□□□ -0.25
CAPN1-211ENST00000527739 ZNF503Q96F45 646 aa13.48□□□□□ -0.25
CAPN1-211ENST00000527739 HYLS1Q96M11 299 aa13.48□□□□□ -0.25
CAPN1-211ENST00000527739 Q9H3A6 140 aa13.48□□□□□ -0.25
CAPN1-211ENST00000527739 ZNF492Q9P255 531 aa13.48□□□□□ -0.25
CAPN1-211ENST00000527739 ABCA13Q86UQ4 5058 aa13.47□□□□□ -0.25
CAPN1-211ENST00000527739 TRGV1A0A0A0MS02 117 aa13.47□□□□□ -0.25
CAPN1-211ENST00000527739 A0A1W2PPV4 95 aa13.47□□□□□ -0.25
CAPN1-211ENST00000527739 CRISP2P16562 243 aa13.47□□□□□ -0.25
CAPN1-211ENST00000527739 HOXA5P20719 270 aa13.47□□□□□ -0.25
CAPN1-211ENST00000527739 ACOT6Q3I5F7 207 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-211ENST00000527739 C1orf134Q5TEV5 83 aa13.47□□□□□ -0.25
CAPN1-211ENST00000527739 Q8TAT8 98 aa13.47□□□□□ -0.25
CAPN1-211ENST00000527739 TMPRSS5Q9H3S3 457 aa13.47□□□□□ -0.25
CAPN1-211ENST00000527739 NMBP08949 121 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 ANXA2RQ3ZCQ2 193 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 PRR9Q5T870 116 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 Q6ZQT7 251 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 LYPD1Q8N2G4 141 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 ZFAND2AQ8N6M9 145 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 ARPC5LQ9BPX5 153 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 MED28Q9H204 178 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 RPH3ALQ9UNE2 315 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 LINC00588Q9Y4M8 146 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 KLF12Q9Y4X4 402 aa13.46□□□□□ -0.25
CAPN1-211ENST00000527739 SSX7Q7RTT5 188 aa13.45□□□□□ -0.26
CAPN1-211ENST00000527739 C11orf72Q8NBR9 251 aa13.45□□□□□ -0.26
CAPN1-211ENST00000527739 RXFP4Q8TDU9 374 aa13.45□□□□□ -0.26
CAPN1-211ENST00000527739 LINC00467Q9BRT7 94 aa13.45□□□□□ -0.26
CAPN1-211ENST00000527739 TP53TG3Q9ULZ0 132 aa13.45□□□□□ -0.26
CAPN1-211ENST00000527739 IGHV1OR15-1A0A075B7D0 117 aa13.44□□□□□ -0.26
CAPN1-211ENST00000527739 ZNRF2Q8NHG8 242 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms