RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 HOXB5P09067 269 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 CRISP2P16562 243 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 CD300CQ08708 224 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 TDRG1Q3Y452 100 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 BPIFA4PQ86YQ2 179 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 SOSTQ9BQB4 213 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 ARL6Q9H0F7 186 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 RBM38Q9H0Z9 239 aaKnown RBP10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 NDUFA13Q9P0J0 144 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 STRAPQ9Y3F4 350 aaKnown RBP10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 E5RGE8 158 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 NMBP08949 121 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 SNRPCP09234 159 aaKnown RBP10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 GYPEP15421 78 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 ANXA7P20073 488 aaKnown RBP10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 TNFSF8P32971 234 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 AP3S2P59780 193 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 BTN1A1Q13410 526 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 LAGE3Q14657 143 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 MORN5Q5VZ52 161 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 LINC00305Q7Z4B0 112 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 OR10G4Q8NGN3 311 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 MCFD2Q8NI22 146 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 TXNDC17Q9BRA2 123 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 TP53TG3Q9ULZ0 132 aa10.69□□□□□ -0.7
CHMP4A-203ENST00000527154 ZNF253O75346 499 aa10.68□□□□□ -0.7
CHMP4A-203ENST00000527154 MPDU1O75352 247 aa10.68□□□□□ -0.7
CHMP4A-203ENST00000527154 SFT2D2O95562 160 aa10.68□□□□□ -0.7
CHMP4A-203ENST00000527154 PPP1R1AQ13522 171 aa10.68□□□□□ -0.7
CHMP4A-203ENST00000527154 TOMM5Q8N4H5 51 aa10.68□□□□□ -0.7
CHMP4A-203ENST00000527154 CIRBP-AS1Q8TBR5 109 aa10.68□□□□□ -0.7
CHMP4A-203ENST00000527154 TRIM63Q969Q1 353 aa10.68□□□□□ -0.7
CHMP4A-203ENST00000527154 ZNF479Q96JC4 524 aa10.68□□□□□ -0.7
CHMP4A-203ENST00000527154 BOLA1Q9Y3E2 137 aa10.68□□□□□ -0.7
CHMP4A-203ENST00000527154 RS1O15537 224 aa10.67□□□□□ -0.7
CHMP4A-203ENST00000527154 IGLV2-8P01709 118 aa10.67□□□□□ -0.7
CHMP4A-203ENST00000527154 HNRNPA3P51991 378 aaKnown RBP10.67□□□□□ -0.7
CHMP4A-203ENST00000527154 ZFAND2AQ8N6M9 145 aa10.67□□□□□ -0.7
CHMP4A-203ENST00000527154 BLNKQ8WV28 456 aa10.67□□□□□ -0.7
CHMP4A-203ENST00000527154 TMEM37Q8WXS4 190 aa10.67□□□□□ -0.7
CHMP4A-203ENST00000527154 RASL10AQ92737 203 aa10.67□□□□□ -0.7
CHMP4A-203ENST00000527154 LINC00477Q96M19 166 aa10.67□□□□□ -0.7
CHMP4A-203ENST00000527154 SLC25A21Q9BQT8 299 aaPredicted RBP10.67□□□□□ -0.7
CHMP4A-203ENST00000527154 H3BTX0 84 aa10.66□□□□□ -0.7
CHMP4A-203ENST00000527154 S100A5P33763 92 aa10.66□□□□□ -0.7
CHMP4A-203ENST00000527154 OPCMLQ14982 345 aa10.66□□□□□ -0.7
CHMP4A-203ENST00000527154 GUK1Q16774 197 aa10.66□□□□□ -0.7
CHMP4A-203ENST00000527154 PYDC2Q56P42 97 aa10.66□□□□□ -0.7
CHMP4A-203ENST00000527154 SH2D6Q7Z4S9 175 aa10.66□□□□□ -0.7
CHMP4A-203ENST00000527154 NPVFQ9HCQ7 196 aa10.66□□□□□ -0.7
CHMP4A-203ENST00000527154 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 TRGV4A0A0C4DH28 118 aa10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 C9JCJ5 164 aa10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 OR4E1P0C645 316 aa10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 SFTA3P0C7M3 94 aa10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 POLR2GP62487 172 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 ID3Q02535 119 aa10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 PRR9Q5T870 116 aa10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 PCNPQ8WW12 178 aaKnown RBP10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 DAZAP1Q96EP5 407 aaKnown RBP10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 AGPAT4-IT1Q9H0P7 198 aa10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 Q9HAA7 133 aa10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 PSENENQ9NZ42 101 aa10.65□□□□□ -0.7
CHMP4A-203ENST00000527154 RRAS2P62070 204 aaPredicted RBP10.64□□□□□ -0.71
CHMP4A-203ENST00000527154 SLC38A11Q08AI6 406 aa10.64□□□□□ -0.71
CHMP4A-203ENST00000527154 ERCC8Q13216 396 aa10.64□□□□□ -0.71
CHMP4A-203ENST00000527154 ZNF846Q147U1 533 aa10.64□□□□□ -0.71
CHMP4A-203ENST00000527154 TMEM14EPQ6UXP3 125 aa10.64□□□□□ -0.71
CHMP4A-203ENST00000527154 Q6ZQT7 251 aa10.64□□□□□ -0.71
CHMP4A-203ENST00000527154 DEDD2Q8WXF8 326 aa10.64□□□□□ -0.71
CHMP4A-203ENST00000527154 TM2D2Q9BX73 214 aa10.64□□□□□ -0.71
CHMP4A-203ENST00000527154 M0R3E3 92 aa10.63□□□□□ -0.71
CHMP4A-203ENST00000527154 SSSCA1O60232 199 aa10.63□□□□□ -0.71
CHMP4A-203ENST00000527154 CCNKO75909 580 aa10.63□□□□□ -0.71
CHMP4A-203ENST00000527154 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
CHMP4A-203ENST00000527154 C9orf47Q6ZRZ4 202 aa10.63□□□□□ -0.71
CHMP4A-203ENST00000527154 ZNF546Q86UE3 836 aa10.63□□□□□ -0.71
CHMP4A-203ENST00000527154 OR10P1Q8NGE3 313 aa10.63□□□□□ -0.71
CHMP4A-203ENST00000527154 IGLV2-11P01706 119 aa10.62□□□□□ -0.71
CHMP4A-203ENST00000527154 ACOT6Q3I5F7 207 aaPredicted RBP10.62□□□□□ -0.71
CHMP4A-203ENST00000527154 LINC01620Q4KN68 170 aa10.62□□□□□ -0.71
CHMP4A-203ENST00000527154 V9GYH0 126 aa10.62□□□□□ -0.71
CHMP4A-203ENST00000527154 LOC100131303A0A0U1RQF7 123 aa10.61□□□□□ -0.71
CHMP4A-203ENST00000527154 RGS13O14921 159 aa10.61□□□□□ -0.71
CHMP4A-203ENST00000527154 AGPAT2O15120 278 aa10.61□□□□□ -0.71
CHMP4A-203ENST00000527154 NDUFB4O95168 129 aa10.61□□□□□ -0.71
CHMP4A-203ENST00000527154 METTL15P1P0C7V9 234 aa10.61□□□□□ -0.71
CHMP4A-203ENST00000527154 SPANXN2Q5MJ10 180 aa10.61□□□□□ -0.71
CHMP4A-203ENST00000527154 SMIM8Q96KF7 97 aa10.61□□□□□ -0.71
CHMP4A-203ENST00000527154 SLC25A31Q9H0C2 315 aa10.61□□□□□ -0.71
CHMP4A-203ENST00000527154 MGAT4CQ9UBM8 478 aa10.61□□□□□ -0.71
CHMP4A-203ENST00000527154 TRBV19A0A075B6N1 114 aa10.6□□□□□ -0.71
CHMP4A-203ENST00000527154 TRAV4A0A0B4J268 109 aa10.6□□□□□ -0.71
CHMP4A-203ENST00000527154 TRBV7-9A0A0J9YWB2 115 aa10.6□□□□□ -0.71
CHMP4A-203ENST00000527154 C9orf170A2RU37 121 aa10.6□□□□□ -0.71
CHMP4A-203ENST00000527154 GPX1P07203 203 aa10.6□□□□□ -0.71
CHMP4A-203ENST00000527154 UBE2MP61081 183 aaKnown RBP10.6□□□□□ -0.71
CHMP4A-203ENST00000527154 ARPC5LQ9BPX5 153 aa10.6□□□□□ -0.71
CHMP4A-203ENST00000527154 PRELID1Q9Y255 219 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms