RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 UCNP55089 124 aa13.83□□□□□ -0.19
IKBKB-228ENST00000523517 KLK9Q2XQG4 91 aa13.83□□□□□ -0.19
IKBKB-228ENST00000523517 KLK9Q9UKQ9 250 aa13.83□□□□□ -0.19
IKBKB-228ENST00000523517 CEP295Q9C0D2 2601 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 DCHS2Q6V1P9 2916 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 A0A1W2PPR1 153 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 ATP6V0E1O15342 81 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 UBE2E1P51965 193 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 NHLH1Q02575 133 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 FOXE3Q13461 319 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 ANKRD39Q53RE8 183 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 ERASQ7Z444 233 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 MSRB1Q9NZV6 116 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 LRBAP50851 2863 aa13.83□□□□□ -0.2
IKBKB-228ENST00000523517 SNAI2O43623 268 aa13.82□□□□□ -0.2
IKBKB-228ENST00000523517 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.82□□□□□ -0.2
IKBKB-228ENST00000523517 RNF185Q96GF1 192 aa13.82□□□□□ -0.2
IKBKB-228ENST00000523517 CNFNQ9BYD5 112 aa13.82□□□□□ -0.2
IKBKB-228ENST00000523517 CD5LO43866 347 aa13.82□□□□□ -0.2
IKBKB-228ENST00000523517 CACNG7P62955 275 aa13.82□□□□□ -0.2
IKBKB-228ENST00000523517 RNF182Q8N6D2 247 aa13.82□□□□□ -0.2
IKBKB-228ENST00000523517 OR4C5Q8NGB2 326 aa13.82□□□□□ -0.2
IKBKB-228ENST00000523517 OR1N2Q8NGR9 330 aa13.82□□□□□ -0.2
IKBKB-228ENST00000523517 GOSR1O95249 250 aa13.81□□□□□ -0.2
IKBKB-228ENST00000523517 FGF6P10767 208 aa13.81□□□□□ -0.2
IKBKB-228ENST00000523517 IFI27L1Q96BM0 104 aa13.81□□□□□ -0.2
IKBKB-228ENST00000523517 CLPSL1A2RUU4 121 aa13.81□□□□□ -0.2
IKBKB-228ENST00000523517 RBAKDNA6NC62 111 aa13.81□□□□□ -0.2
IKBKB-228ENST00000523517 K7EP13 123 aa13.81□□□□□ -0.2
IKBKB-228ENST00000523517 LINC01559Q495D7 138 aa13.81□□□□□ -0.2
IKBKB-228ENST00000523517 IGHV3-66A0A0C4DH42 116 aa13.8□□□□□ -0.2
IKBKB-228ENST00000523517 CBY3A6NI87 242 aa13.8□□□□□ -0.2
IKBKB-228ENST00000523517 PRSS57Q6UWY2 283 aa13.8□□□□□ -0.2
IKBKB-228ENST00000523517 SLC50A1Q9BRV3 221 aa13.8□□□□□ -0.2
IKBKB-228ENST00000523517 PPBPP02775 128 aa13.8□□□□□ -0.2
IKBKB-228ENST00000523517 SAA4P35542 130 aa13.8□□□□□ -0.2
IKBKB-228ENST00000523517 CLEC19AQ6UXS0 136 aa13.8□□□□□ -0.2
IKBKB-228ENST00000523517 IL17RELQ6ZVW7 336 aa13.8□□□□□ -0.2
IKBKB-228ENST00000523517 RNASE8Q8TDE3 154 aaKnown RBP13.8□□□□□ -0.2
IKBKB-228ENST00000523517 CCDC140Q96MF4 163 aa13.8□□□□□ -0.2
IKBKB-228ENST00000523517 RELNP78509 3460 aa13.79□□□□□ -0.2
IKBKB-228ENST00000523517 NPFFR1Q9GZQ6 430 aa13.79□□□□□ -0.2
IKBKB-228ENST00000523517 MAP1LC3AQ9H492 121 aa13.79□□□□□ -0.2
IKBKB-228ENST00000523517 G3V318 75 aa13.79□□□□□ -0.2
IKBKB-228ENST00000523517 LINC01548A6NM66 108 aa13.78□□□□□ -0.2
IKBKB-228ENST00000523517 TMEM97Q5BJF2 176 aa13.78□□□□□ -0.2
IKBKB-228ENST00000523517 GAS8-AS1O95177 125 aa13.78□□□□□ -0.2
IKBKB-228ENST00000523517 SPTA1P02549 2419 aa13.77□□□□□ -0.2
IKBKB-228ENST00000523517 IGHV3OR16-13A0A075B7E8 117 aa13.77□□□□□ -0.21
IKBKB-228ENST00000523517 IGHV3-74A0A0B4J1X5 117 aa13.77□□□□□ -0.21
IKBKB-228ENST00000523517 LINC01546A6NGU7 62 aa13.77□□□□□ -0.21
IKBKB-228ENST00000523517 PPIFP30405 207 aaKnown RBP13.77□□□□□ -0.21
IKBKB-228ENST00000523517 BOD1L2Q8IYS8 172 aa13.77□□□□□ -0.21
IKBKB-228ENST00000523517 EEF1AKMT3Q96AZ1 226 aa13.77□□□□□ -0.21
IKBKB-228ENST00000523517 AGPAT4-IT1Q9H0P7 198 aa13.77□□□□□ -0.21
IKBKB-228ENST00000523517 CENPVL3A0A0U1RRI6 287 aa13.76□□□□□ -0.21
IKBKB-228ENST00000523517 EFNA4P52798 201 aa13.76□□□□□ -0.21
IKBKB-228ENST00000523517 WFDC3Q8IUB2 231 aa13.76□□□□□ -0.21
IKBKB-228ENST00000523517 UBTD1Q9HAC8 227 aa13.76□□□□□ -0.21
IKBKB-228ENST00000523517 TRAV8-2A0A0B4J237 113 aa13.76□□□□□ -0.21
IKBKB-228ENST00000523517 IGKV3D-20A0A0C4DH25 116 aa13.76□□□□□ -0.21
IKBKB-228ENST00000523517 TNFRSF6BO95407 300 aa13.76□□□□□ -0.21
IKBKB-228ENST00000523517 SEC11AP67812 179 aa13.76□□□□□ -0.21
IKBKB-228ENST00000523517 AMMECR1LQ6DCA0 310 aa13.76□□□□□ -0.21
IKBKB-228ENST00000523517 LMO4P61968 165 aa13.75□□□□□ -0.21
IKBKB-228ENST00000523517 METTL26Q96S19 204 aa13.75□□□□□ -0.21
IKBKB-228ENST00000523517 TRBV7-1A0A0A6YYK4 115 aa13.75□□□□□ -0.21
IKBKB-228ENST00000523517 SMAD7O15105 426 aaKnown RBP13.75□□□□□ -0.21
IKBKB-228ENST00000523517 TCTAP57738 103 aa13.75□□□□□ -0.21
IKBKB-228ENST00000523517 NXT2Q9NPJ8 142 aaKnown RBP13.75□□□□□ -0.21
IKBKB-228ENST00000523517 C11orf21Q9P2W6 132 aa13.75□□□□□ -0.21
IKBKB-228ENST00000523517 IGHV3-49A0A0A0MS15 119 aa13.74□□□□□ -0.21
IKBKB-228ENST00000523517 NPFFO15130 113 aa13.74□□□□□ -0.21
IKBKB-228ENST00000523517 ZNF207O43670 478 aaKnown RBP13.74□□□□□ -0.21
IKBKB-228ENST00000523517 EVI2AP22794 236 aa13.74□□□□□ -0.21
IKBKB-228ENST00000523517 LEPP41159 167 aa13.74□□□□□ -0.21
IKBKB-228ENST00000523517 DKK2Q9UBU2 259 aa13.74□□□□□ -0.21
IKBKB-228ENST00000523517 CSMD1Q96PZ7 3565 aa13.74□□□□□ -0.21
IKBKB-228ENST00000523517 FCER1GP30273 86 aa13.74□□□□□ -0.21
IKBKB-228ENST00000523517 MRPL53Q96EL3 112 aaKnown RBP13.74□□□□□ -0.21
IKBKB-228ENST00000523517 C18orf15Q96N68 181 aa13.74□□□□□ -0.21
IKBKB-228ENST00000523517 HRNRQ86YZ3 2850 aaPredicted RBP13.73□□□□□ -0.21
IKBKB-228ENST00000523517 C7orf71A4D174 169 aa13.73□□□□□ -0.21
IKBKB-228ENST00000523517 RBX1P62877 108 aa13.73□□□□□ -0.21
IKBKB-228ENST00000523517 TMEM78Q5T7P6 136 aa13.73□□□□□ -0.21
IKBKB-228ENST00000523517 C8orf86Q6ZUL3 223 aa13.73□□□□□ -0.21
IKBKB-228ENST00000523517 C5orf56Q8N8D9 126 aa13.73□□□□□ -0.21
IKBKB-228ENST00000523517 OR9G4Q8NGQ1 327 aa13.73□□□□□ -0.21
IKBKB-228ENST00000523517 BPESC1Q9GZL8 116 aa13.73□□□□□ -0.21
IKBKB-228ENST00000523517 PEF1Q9UBV8 284 aaKnown RBP13.73□□□□□ -0.21
IKBKB-228ENST00000523517 A1L4Q6 167 aa13.73□□□□□ -0.21
IKBKB-228ENST00000523517 GATA1P15976 413 aaPredicted RBP13.73□□□□□ -0.21
IKBKB-228ENST00000523517 U3KQE9 123 aa13.73□□□□□ -0.21
IKBKB-228ENST00000523517 TRAV8-6A0A0B4J262 113 aa13.72□□□□□ -0.21
IKBKB-228ENST00000523517 SIVA1O15304 175 aa13.72□□□□□ -0.21
IKBKB-228ENST00000523517 ATP5G2Q06055 141 aa13.72□□□□□ -0.21
IKBKB-228ENST00000523517 HIF1ANQ9NWT6 349 aa13.72□□□□□ -0.21
IKBKB-228ENST00000523517 UQCRFS1P47985 274 aa13.71□□□□□ -0.22
IKBKB-228ENST00000523517 NMUP48645 174 aa13.71□□□□□ -0.22
IKBKB-228ENST00000523517 HSD52Q0P140 79 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms