RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 OR1B1Q8NGR6 318 aa4.1□□□□□ -1.75
VPS13B-211ENST00000522802 OR52E5Q8NH55 327 aa4.1□□□□□ -1.75
VPS13B-211ENST00000522802 RPUSD4Q96CM3 377 aaKnown RBP4.1□□□□□ -1.75
VPS13B-211ENST00000522802 C20orf144Q9BQM9 153 aa4.1□□□□□ -1.75
VPS13B-211ENST00000522802 DIABLOQ9NR28 239 aa4.1□□□□□ -1.75
VPS13B-211ENST00000522802 MRPL16Q9NX20 251 aaKnown RBP4.1□□□□□ -1.75
VPS13B-211ENST00000522802 PRO0255Q9UI72 69 aa4.1□□□□□ -1.75
VPS13B-211ENST00000522802 TPRKBQ9Y3C4 175 aa4.1□□□□□ -1.75
VPS13B-211ENST00000522802 KLF12Q9Y4X4 402 aa4.1□□□□□ -1.75
VPS13B-211ENST00000522802 IBA57-AS1B1ANH7 110 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 E5RGE8 158 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 H3BRN7 92 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 ATG12O94817 140 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 ORM2P19652 201 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 SRIP30626 198 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 RCVRNP35243 200 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 TMEM182Q6ZP80 229 aaPredicted RBP4.09□□□□□ -1.75
VPS13B-211ENST00000522802 C10orf67Q8IYJ2 551 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 OR4D5Q8NGN0 318 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 SLC35E1Q96K37 410 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 TRGV9Q99603 122 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 VGLL1Q99990 258 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.09□□□□□ -1.75
VPS13B-211ENST00000522802 HHLA3Q9XRX5 114 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 TMEM56-RWDD3S4R434 201 aa4.09□□□□□ -1.75
VPS13B-211ENST00000522802 TRAV5A0A0B4J249 113 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 IGHV3-38A0A0C4DH36 116 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 LOC100131303A0A0U1RQF7 123 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 GABARAPH6UMI1 98 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 SPINK4O60575 86 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 GABARAPO95166 117 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 FABP1P07148 127 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 SNRPCP09234 159 aaKnown RBP4.08□□□□□ -1.76
VPS13B-211ENST00000522802 SMIM18P0DKX4 95 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 LINC01556Q5JQF7 62 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 FAM219AQ8IW50 185 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 LGI3Q8N145 548 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 THAP8Q8NA92 274 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 ZNF486Q96H40 463 aaPredicted RBP4.08□□□□□ -1.76
VPS13B-211ENST00000522802 GPR82Q96P67 336 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 PYGO2Q9BRQ0 406 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 TMEM222Q9H0R3 208 aa4.08□□□□□ -1.76
VPS13B-211ENST00000522802 FSIP2Q5CZC0 6907 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 A0A087X0K7 114 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 FAM25EA8MYX2 175 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 SLC17A3O00476 420 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 CDS2O95674 445 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 IGHV3-30P01768 117 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 IGHV3-33P01772 117 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 SFTA3P0C7M3 94 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 IGHV3-30-3P0DP02 117 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 IGHV3-30-5P0DP03 117 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 PRSS3P35030 304 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 AQP4P55087 323 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 TCL1AP56279 114 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 UBE2NLQ5JXB2 153 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 PRR27Q6MZM9 219 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 LHFPL1Q86WI0 220 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 ZNF680Q8NEM1 530 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 OR13C8Q8NGS7 320 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 DTD1Q8TEA8 209 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 GPX8Q8TED1 209 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 PCNPQ8WW12 178 aaKnown RBP4.07□□□□□ -1.76
VPS13B-211ENST00000522802 RBPMSQ93062 196 aaKnown RBP4.07□□□□□ -1.76
VPS13B-211ENST00000522802 FAM210AQ96ND0 272 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 SHANK2-AS3Q9BTD1 123 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 TMEM147Q9BVK8 224 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 RBKSQ9H477 322 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 TP53TG3Q9ULZ0 132 aa4.07□□□□□ -1.76
VPS13B-211ENST00000522802 H3BTX0 84 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 CT45A10P0DMU9 189 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 TGFBR1P36897 503 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 GPX4P36969 197 aaPredicted RBP4.06□□□□□ -1.76
VPS13B-211ENST00000522802 BTN1A1Q13410 526 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 ASAH1Q13510 395 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 VWC2Q2TAL6 325 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 ACOT6Q3I5F7 207 aaPredicted RBP4.06□□□□□ -1.76
VPS13B-211ENST00000522802 Q6ZQT7 251 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 Q6ZRU5 148 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 SELENOHQ8IZQ5 122 aaKnown RBP4.06□□□□□ -1.76
VPS13B-211ENST00000522802 SAMD12Q8N8I0 201 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 ZBTB8BQ8NAP8 495 aaPredicted RBP4.06□□□□□ -1.76
VPS13B-211ENST00000522802 OR4D10Q8NGI6 311 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 ZNF431Q8TF32 576 aaPredicted RBP4.06□□□□□ -1.76
VPS13B-211ENST00000522802 GLYATL2Q8WU03 294 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 BLNKQ8WV28 456 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 BAALCQ8WXS3 180 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 S100A16Q96FQ6 103 aaKnown RBP4.06□□□□□ -1.76
VPS13B-211ENST00000522802 MRPL32Q9BYC8 188 aaKnown RBP4.06□□□□□ -1.76
VPS13B-211ENST00000522802 COPZ2Q9P299 210 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 SSR3Q9UNL2 185 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 U3KQ87 197 aa4.06□□□□□ -1.76
VPS13B-211ENST00000522802 A0A087X002 238 aa4.05□□□□□ -1.76
VPS13B-211ENST00000522802 TRGV4A0A0C4DH28 118 aa4.05□□□□□ -1.76
VPS13B-211ENST00000522802 LOC100506127A0A0U1RQW1 187 aa4.05□□□□□ -1.76
VPS13B-211ENST00000522802 C7orf71A4D174 169 aa4.05□□□□□ -1.76
VPS13B-211ENST00000522802 RBFOX3A6NFN3 312 aa4.05□□□□□ -1.76
VPS13B-211ENST00000522802 PRSS46E5RG02 174 aa4.05□□□□□ -1.76
VPS13B-211ENST00000522802 MRPS12O15235 138 aaKnown RBP4.05□□□□□ -1.76
VPS13B-211ENST00000522802 SULT1A3P0DMM9 295 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms