RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 WDR73Q6P4I2 378 aa5.51□□□□□ -1.53
MRPS28-205ENST00000519386 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.51□□□□□ -1.53
MRPS28-205ENST00000519386 GOLT1AQ6ZVE7 132 aa5.51□□□□□ -1.53
MRPS28-205ENST00000519386 ATP5L2Q7Z4Y8 100 aa5.51□□□□□ -1.53
MRPS28-205ENST00000519386 EXOC3-AS1Q8N2X6 119 aa5.51□□□□□ -1.53
MRPS28-205ENST00000519386 CITED1Q99966 193 aa5.51□□□□□ -1.53
MRPS28-205ENST00000519386 KLK15Q9H2R5 256 aa5.51□□□□□ -1.53
MRPS28-205ENST00000519386 UFC1Q9Y3C8 167 aa5.51□□□□□ -1.53
MRPS28-205ENST00000519386 NOTCH3Q9UM47 2321 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 IGHV7-4-1A0A0J9YVY3 117 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 TRBV7-9A0A0J9YWB2 115 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 ZNF785A8K8V0 405 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 ZNF705GA8MUZ8 300 aaPredicted RBP5.5□□□□□ -1.53
MRPS28-205ENST00000519386 A8MWL6 223 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 UBE2CO00762 179 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 PHOX2AO14813 284 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 P01737 135 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 PF4P02776 101 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 S100A6P06703 90 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 CT45A10P0DMU9 189 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 MGST1P10620 155 aaKnown RBP5.5□□□□□ -1.53
MRPS28-205ENST00000519386 CDX1P47902 265 aaPredicted RBP5.5□□□□□ -1.53
MRPS28-205ENST00000519386 ACTL10Q5JWF8 245 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 GBGT1Q8N5D6 347 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 TSKUQ8WUA8 353 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 LINC00479Q96M42 142 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 NDFIP1Q9BT67 221 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 RPP21Q9H633 154 aaKnown RBP5.5□□□□□ -1.53
MRPS28-205ENST00000519386 AURKAIP1Q9NWT8 199 aaPredicted RBP5.5□□□□□ -1.53
MRPS28-205ENST00000519386 NAT8BQ9UHF3 227 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 LENEPQ9Y5L5 61 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 SMAD5-AS1Q9Y6J3 95 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 MGAM2Q2M2H8 2515 aa5.5□□□□□ -1.53
MRPS28-205ENST00000519386 TRAV34A0A0B4J273 112 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 IGHV3-35A0A0C4DH35 117 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 IZUMO1RA6ND01 250 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 C5orf52A6NGY3 159 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 H3BTX0 84 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 CHEK1O14757 476 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 GATCO43716 136 aaKnown RBP5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST1H2BKO60814 126 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 TRBV12-3P01733 135 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HLA-DQA1P01909 254 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST1H2BJP06899 126 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST1H2BOP23527 126 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST1H2BBP33778 126 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST1H2BDP58876 126 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST1H2BCP62807 126 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 OR5I1Q13606 314 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST2H2BEQ16778 126 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 TCTEX1D4Q5JR98 221 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 COA6Q5JTJ3 125 aaKnown RBP5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.49□□□□□ -1.53
MRPS28-205ENST00000519386 UNQ9165/PRO28630Q6UXU0 137 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 LCNL1Q6ZST4 164 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 NUDT10Q8NFP7 164 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 C4orf3Q8WVX3 66 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST1H2BHQ93079 126 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 NUDT11Q96G61 164 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 C17orf77Q96MU5 243 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST1H2BNQ99877 126 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 HIST1H2BMQ99879 126 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 CITED2Q99967 270 aaPredicted RBP5.49□□□□□ -1.53
MRPS28-205ENST00000519386 GNB1LQ9BYB4 327 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 RNASE7Q9H1E1 156 aaKnown RBP5.49□□□□□ -1.53
MRPS28-205ENST00000519386 NRN1Q9NPD7 142 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 RPH3ALQ9UNE2 315 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 PSG8Q9UQ74 426 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 TRRAPQ9Y4A5 3859 aa5.49□□□□□ -1.53
MRPS28-205ENST00000519386 A0A1B0GW15 77 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 A0A1W2PRX2 142 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 XKRY2A2RUG3 117 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 M0R3E3 92 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 SOCS3O14543 225 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 IGHV3-11P01762 117 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 TRGC2P03986 189 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 FOXA3P55318 350 aaPredicted RBP5.48□□□□□ -1.53
MRPS28-205ENST00000519386 KHDC1LQ5JSQ8 128 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 LCN12Q6JVE5 192 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 C9orf47Q6ZRZ4 202 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 DAZAP1Q96EP5 407 aaKnown RBP5.48□□□□□ -1.53
MRPS28-205ENST00000519386 PRR25Q96S07 402 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 SMPXQ9UHP9 88 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 DNHD1Q96M86 4753 aa5.48□□□□□ -1.53
MRPS28-205ENST00000519386 IGHV3OR16-8A0A075B7F1 116 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 TRAV8-1A0A0A6YYK1 113 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 TRAV2A0A0B4J234 112 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 TRAV8-2A0A0B4J237 113 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 OVOL1O14753 267 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 APOHP02749 345 aaPredicted RBP5.47□□□□□ -1.53
MRPS28-205ENST00000519386 S100A8P05109 93 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 RPS20P60866 119 aaKnown RBP5.47□□□□□ -1.53
MRPS28-205ENST00000519386 NSUN5P1Q3KNT7 163 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 FAM162BQ5T6X4 162 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 RBPMS2Q6ZRY4 209 aaKnown RBP5.47□□□□□ -1.53
MRPS28-205ENST00000519386 PRNTQ86SH4 94 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 NDUFA11Q86Y39 141 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 NHLRC2Q8NBF2 726 aa5.47□□□□□ -1.53
MRPS28-205ENST00000519386 ZC2HC1AQ96GY0 325 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms