RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 PSG3Q16557 428 aa13.35□□□□□ -0.27
TFF3-204ENST00000518498 CCDC28AQ8IWP9 274 aa13.35□□□□□ -0.27
TFF3-204ENST00000518498 EXOC3-AS1Q8N2X6 119 aa13.35□□□□□ -0.27
TFF3-204ENST00000518498 HIST1H2BAQ96A08 127 aa13.35□□□□□ -0.27
TFF3-204ENST00000518498 RPUSD4Q96CM3 377 aaKnown RBP13.35□□□□□ -0.27
TFF3-204ENST00000518498 KRTAP17-1Q9BYP8 105 aa13.35□□□□□ -0.27
TFF3-204ENST00000518498 TMEM250H0YL14 139 aa13.34□□□□□ -0.27
TFF3-204ENST00000518498 K7EQM0 130 aa13.34□□□□□ -0.27
TFF3-204ENST00000518498 TFPI2P48307 235 aa13.34□□□□□ -0.27
TFF3-204ENST00000518498 DEFB135Q30KP9 77 aa13.34□□□□□ -0.27
TFF3-204ENST00000518498 TREM1Q9NP99 234 aa13.34□□□□□ -0.27
TFF3-204ENST00000518498 ALMS1Q8TCU4 4167 aa13.34□□□□□ -0.27
TFF3-204ENST00000518498 TRAV8-2A0A0B4J237 113 aa13.33□□□□□ -0.28
TFF3-204ENST00000518498 KIR2DL5BA0A0G2JN68 375 aa13.33□□□□□ -0.28
TFF3-204ENST00000518498 KIR2DL5BA0A0G2JPC4 375 aa13.33□□□□□ -0.28
TFF3-204ENST00000518498 KIR2DL5AQ8N109 375 aa13.33□□□□□ -0.28
TFF3-204ENST00000518498 KIR2DL5BQ8NHK3 375 aa13.33□□□□□ -0.28
TFF3-204ENST00000518498 RNF183Q96D59 192 aa13.33□□□□□ -0.28
TFF3-204ENST00000518498 EPDR1Q9UM22 224 aa13.33□□□□□ -0.28
TFF3-204ENST00000518498 ZNF738Q8NE65 137 aa13.32□□□□□ -0.28
TFF3-204ENST00000518498 C11orf52Q96A22 123 aa13.32□□□□□ -0.28
TFF3-204ENST00000518498 LINC00052Q96N35 136 aa13.32□□□□□ -0.28
TFF3-204ENST00000518498 ATG101Q9BSB4 218 aa13.32□□□□□ -0.28
TFF3-204ENST00000518498 FBLL1A6NHQ2 334 aaKnown RBP13.31□□□□□ -0.28
TFF3-204ENST00000518498 PEX7O00628 323 aa13.31□□□□□ -0.28
TFF3-204ENST00000518498 TCRAP04437 139 aa13.31□□□□□ -0.28
TFF3-204ENST00000518498 S100A9P06702 114 aaKnown RBP13.31□□□□□ -0.28
TFF3-204ENST00000518498 CYB561D1Q8N8Q1 229 aa13.31□□□□□ -0.28
TFF3-204ENST00000518498 SLC35B3Q9H1N7 401 aa13.31□□□□□ -0.28
TFF3-204ENST00000518498 RBAKDNA6NC62 111 aa13.3□□□□□ -0.28
TFF3-204ENST00000518498 DIRC3C9JPN6 131 aa13.3□□□□□ -0.28
TFF3-204ENST00000518498 M0R3E3 92 aa13.3□□□□□ -0.28
TFF3-204ENST00000518498 SRP19P09132 144 aaKnown RBP13.3□□□□□ -0.28
TFF3-204ENST00000518498 ZNF688P0C7X2 276 aa13.3□□□□□ -0.28
TFF3-204ENST00000518498 RPL35AP18077 110 aaKnown RBP13.3□□□□□ -0.28
TFF3-204ENST00000518498 AKR1C3P42330 323 aa13.3□□□□□ -0.28
TFF3-204ENST00000518498 IGFL4Q6B9Z1 124 aa13.3□□□□□ -0.28
TFF3-204ENST00000518498 RNF182Q8N6D2 247 aa13.3□□□□□ -0.28
TFF3-204ENST00000518498 SCO2A0A1W2PP80 73 aa13.29□□□□□ -0.28
TFF3-204ENST00000518498 HLA-DMBP28068 263 aa13.29□□□□□ -0.28
TFF3-204ENST00000518498 CNN1P51911 297 aaKnown RBP13.29□□□□□ -0.28
TFF3-204ENST00000518498 PSMG4Q5JS54 123 aa13.29□□□□□ -0.28
TFF3-204ENST00000518498 PHLDA1Q8WV24 401 aaPredicted RBP13.29□□□□□ -0.28
TFF3-204ENST00000518498 MAP6D1Q9H9H5 199 aa13.29□□□□□ -0.28
TFF3-204ENST00000518498 RPH3ALQ9UNE2 315 aa13.29□□□□□ -0.28
TFF3-204ENST00000518498 GNG5P63218 68 aa13.28□□□□□ -0.28
TFF3-204ENST00000518498 SRSF3P84103 164 aaKnown RBP13.28□□□□□ -0.28
TFF3-204ENST00000518498 ODF3L2Q3SX64 289 aa13.28□□□□□ -0.28
TFF3-204ENST00000518498 LGALS9CQ6DKI2 356 aa13.28□□□□□ -0.28
TFF3-204ENST00000518498 GOLT1AQ6ZVE7 132 aa13.28□□□□□ -0.28
TFF3-204ENST00000518498 OR10J6PQ8NGY7 276 aa13.28□□□□□ -0.28
TFF3-204ENST00000518498 C20orf173Q96LM9 149 aa13.28□□□□□ -0.28
TFF3-204ENST00000518498 ZNF705FA8MVS1 300 aaPredicted RBP13.27□□□□□ -0.29
TFF3-204ENST00000518498 UBE2G1P62253 170 aa13.27□□□□□ -0.29
TFF3-204ENST00000518498 FAM74A3Q4VXF1 159 aa13.27□□□□□ -0.29
TFF3-204ENST00000518498 EBLN2Q6P2I7 272 aa13.27□□□□□ -0.29
TFF3-204ENST00000518498 FAM24BQ8N5W8 94 aa13.27□□□□□ -0.29
TFF3-204ENST00000518498 TMEM75Q8N9X5 138 aa13.27□□□□□ -0.29
TFF3-204ENST00000518498 C2CD4CQ8TF44 421 aa13.27□□□□□ -0.29
TFF3-204ENST00000518498 FMC1Q96HJ9 113 aa13.27□□□□□ -0.29
TFF3-204ENST00000518498 TAS2R60P59551 318 aa13.26□□□□□ -0.29
TFF3-204ENST00000518498 DEFB131AP59861 70 aa13.26□□□□□ -0.29
TFF3-204ENST00000518498 SOHLH1Q5JUK2 328 aa13.26□□□□□ -0.29
TFF3-204ENST00000518498 FOXI2Q6ZQN5 318 aa13.26□□□□□ -0.29
TFF3-204ENST00000518498 KLF12Q9Y4X4 402 aa13.26□□□□□ -0.29
TFF3-204ENST00000518498 TRBV6-1A0A0K0K1D8 114 aa13.25□□□□□ -0.29
TFF3-204ENST00000518498 DUSP14O95147 198 aaKnown RBP13.25□□□□□ -0.29
TFF3-204ENST00000518498 SFTA3P0C7M3 94 aa13.25□□□□□ -0.29
TFF3-204ENST00000518498 CEBPGP53567 150 aa13.25□□□□□ -0.29
TFF3-204ENST00000518498 TMEM183BQ1AE95 376 aa13.25□□□□□ -0.29
TFF3-204ENST00000518498 APRG1Q8IVJ8 170 aa13.25□□□□□ -0.29
TFF3-204ENST00000518498 SLC7A5P1Q8MH63 180 aa13.25□□□□□ -0.29
TFF3-204ENST00000518498 OR8A1Q8NGG7 326 aa13.25□□□□□ -0.29
TFF3-204ENST00000518498 LINC00477Q96M19 166 aa13.25□□□□□ -0.29
TFF3-204ENST00000518498 CSTL1Q9H114 145 aa13.25□□□□□ -0.29
TFF3-204ENST00000518498 TMEM218A2RU14 115 aa13.24□□□□□ -0.29
TFF3-204ENST00000518498 C9JQL5 133 aa13.24□□□□□ -0.29
TFF3-204ENST00000518498 TMEM78Q5T7P6 136 aa13.24□□□□□ -0.29
TFF3-204ENST00000518498 C9orf47Q6ZRZ4 202 aa13.24□□□□□ -0.29
TFF3-204ENST00000518498 PARLQ9H300 379 aa13.24□□□□□ -0.29
TFF3-204ENST00000518498 SAV1Q9H4B6 383 aaPredicted RBP13.24□□□□□ -0.29
TFF3-204ENST00000518498 IGKV2-40A0A087WW87 121 aaPredicted RBP13.23□□□□□ -0.29
TFF3-204ENST00000518498 A0A0J9YX75 114 aa13.23□□□□□ -0.29
TFF3-204ENST00000518498 ZNF727A8MUV8 499 aa13.23□□□□□ -0.29
TFF3-204ENST00000518498 PRAC2D3DTV9 90 aa13.23□□□□□ -0.29
TFF3-204ENST00000518498 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
TFF3-204ENST00000518498 RPL35P42766 123 aaKnown RBP13.23□□□□□ -0.29
TFF3-204ENST00000518498 FLI1Q01543 452 aaPredicted RBP13.23□□□□□ -0.29
TFF3-204ENST00000518498 SMIM7Q9BQ49 75 aa13.23□□□□□ -0.29
TFF3-204ENST00000518498 NDFIP1Q9BT67 221 aa13.23□□□□□ -0.29
TFF3-204ENST00000518498 PPP1R14DQ9NXH3 145 aa13.23□□□□□ -0.29
TFF3-204ENST00000518498 LENEPQ9Y5L5 61 aa13.23□□□□□ -0.29
TFF3-204ENST00000518498 AGRNO00468 2067 aa13.23□□□□□ -0.29
TFF3-204ENST00000518498 KRBOX1C9JBD0 128 aa13.22□□□□□ -0.29
TFF3-204ENST00000518498 NPIPB6E9PJ23 425 aa13.22□□□□□ -0.29
TFF3-204ENST00000518498 HIST1H1AQ02539 215 aaPredicted RBP13.22□□□□□ -0.29
TFF3-204ENST00000518498 ZNF674Q2M3X9 581 aa13.22□□□□□ -0.29
TFF3-204ENST00000518498 C11orf45Q8TAV5 145 aa13.22□□□□□ -0.29
TFF3-204ENST00000518498 SMIM12Q96EX1 92 aa13.22□□□□□ -0.29
TFF3-204ENST00000518498 PSG8Q9UQ74 426 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms