RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 MIEN1Q9BRT3 115 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 SAMD10Q9BYL1 202 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 RNASE7Q9H1E1 156 aaKnown RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 PRO1933Q9H354 126 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 GNB4Q9HAV0 340 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 CBLN4Q9NTU7 201 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 MRPL36Q9P0J6 103 aaKnown RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 ZNRD1Q9P1U0 126 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 ZFP30Q9Y2G7 519 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 MOB4Q9Y3A3 225 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 MINOS1-NBL1R4GNA1 71 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 ICE1Q9Y2F5 2266 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 SPTBN4Q9H254 2564 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 TPRP12270 2363 aaKnown RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 VPS13AQ96RL7 3174 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 FLNBO75369 2602 aaKnown RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 EP300Q09472 2414 aaPredicted RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 WI2-2373I1.2A0A1W2PRP0 233 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 GRIFINA4D1Z8 144 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 ODF3BA8MYP8 253 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 H3BRN7 92 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 K7EQM0 130 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 NBR2O15453 112 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 ENSAO43768 121 aaKnown RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 MOSP00540 346 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 TCRAP04437 139 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 OR5AL1P0C617 328 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 ORM2P19652 201 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 HNF1AP20823 631 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 COL8A2P25067 703 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 SRIP30626 198 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 GPR6P46095 362 aaPredicted RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 RAB9AP51151 201 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 DSCR10P59022 87 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 NUTF2P61970 127 aaKnown RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 HBBP68871 147 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 SRSF9Q13242 221 aaKnown RBP eCLIP2.86□□□□□ -1.95
CAST-242ENST00000515063 SCGB2A2Q13296 93 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 C10orf55Q5SWW7 151 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 C11orf71Q6IPW1 123 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 HCP5Q6MZN7 132 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 ZNF562Q6V9R5 426 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 COX8CQ7Z4L0 72 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 BPIFA4PQ86YQ2 179 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 TTC9CQ8N5M4 171 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 TMEM75Q8N9X5 138 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 OR4F17Q8NGA8 305 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 OR1B1Q8NGR6 318 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 C18orf32Q8TCD1 76 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 BORCS7Q96B45 105 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 CHCHD1Q96BP2 118 aaKnown RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 RASL11BQ9BPW5 248 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 HSPB9Q9BQS6 159 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 ALKBH7Q9BT30 221 aaPredicted RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 NDFIP1Q9BT67 221 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 SHANK2-AS3Q9BTD1 123 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 VAMP8Q9BV40 100 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 SLC25A39Q9BZJ4 359 aaPredicted RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 Q9H3A6 140 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 RPP21Q9H633 154 aaKnown RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 NRN1Q9NPD7 142 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 THYN1Q9P016 225 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 TBL2Q9Y4P3 447 aaKnown RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 ZNF292O60281 2723 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 ZFHX2Q9C0A1 2572 aaPredicted RBP2.86□□□□□ -1.95
CAST-242ENST00000515063 MAST4O15021 2626 aa2.86□□□□□ -1.95
CAST-242ENST00000515063 FAM208BQ5VWN6 2430 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 POLEQ07864 2286 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 NAV3Q8IVL0 2385 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 IGLV11-55A0A075B6I3 123 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 TRBV19A0A075B6N1 114 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 LOC105371242A0A075B767 164 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 HIGD1CA8MV81 97 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 K7EIM0 57 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 CCL21O00585 134 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 MRPS12O15235 138 aaKnown RBP2.85□□□□□ -1.95
CAST-242ENST00000515063 CRXO43186 299 aaPredicted RBP2.85□□□□□ -1.95
CAST-242ENST00000515063 HSBP1O75506 76 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 IGKV1-17P01599 117 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 P01737 135 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 RD3LP0DJH9 198 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 IGLC2P0DOY2 106 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 SFTPCP11686 197 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 CTRLP40313 264 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 XGP55808 180 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 PSG9Q00887 426 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 RIGQ13278 110 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 FXYD3Q14802 87 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 PLGLAQ15195 96 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 C5orf64Q2M2E5 130 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 MRPL54Q6P161 138 aaKnown RBP2.85□□□□□ -1.95
CAST-242ENST00000515063 IL17RELQ6ZVW7 336 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 SH2D6Q7Z4S9 175 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 Q86TA4 180 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 NIT1Q86X76 327 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 Q8N6K4 173 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 ZNF491Q8N8L2 437 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 Q8N976 141 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 FBXL15Q9H469 300 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 UQCR10Q9UDW1 63 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms