RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 LINC01548A6NM66 108 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 C19orf84I3L1E1 186 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 SH2D1AO60880 128 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 CACNG7P62955 275 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 IL17RELQ6ZVW7 336 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 DYNLRB2Q8TF09 96 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 ZC2HC1AQ96GY0 325 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 COX11Q9Y6N1 276 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 RNF223E7ERA6 249 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 SAP30O75446 220 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 HIST2H2BDQ6DRA6 164 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 DYNAPQ8N1N2 210 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 LINC00311Q8N616 119 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 ZNF491Q8N8L2 437 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 SHANK2-AS3Q9BTD1 123 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 LAMTOR2Q9Y2Q5 125 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 RELNP78509 3460 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 FABP5P3A8MUU1 101 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 IGLV1-47P01700 117 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 GCSHP23434 173 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 C3orf36Q3SXR2 165 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 SFTA2Q6UW10 78 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 MAP1LC3AQ9H492 121 aa9.42□□□□□ -0.9
PRDM16-207ENST00000512462 F6UB75 175 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 FAM106AQ4KMX7 169 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 SLC25A34Q6PIV7 304 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 SCGB1D4Q6XE38 83 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 C1orf122Q6ZSJ8 110 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 TRBV19A0A075B6N1 114 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 IGHV4-61A0A0C4DH41 118 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 FCN3O75636 299 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 ORMDL3Q8N138 153 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 JKAMPQ9P055 326 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 K7EIM0 57 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 IGF2-ASQ6U949 168 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 MYOZ3Q8TDC0 251 aa9.41□□□□□ -0.9
PRDM16-207ENST00000512462 BEX4Q9NWD9 120 aaPredicted RBP9.41□□□□□ -0.9
PRDM16-207ENST00000512462 M0R1W7 72 aa9.4□□□□□ -0.9
PRDM16-207ENST00000512462 IFI27P40305 119 aaPredicted RBP9.4□□□□□ -0.9
PRDM16-207ENST00000512462 BLCAPP62952 87 aa9.4□□□□□ -0.9
PRDM16-207ENST00000512462 PSG3Q16557 428 aa9.4□□□□□ -0.9
PRDM16-207ENST00000512462 IGHV2-70DA0A0C4DH43 119 aa9.4□□□□□ -0.9
PRDM16-207ENST00000512462 A0A1B0GV72 72 aa9.4□□□□□ -0.9
PRDM16-207ENST00000512462 MRPL52Q86TS9 123 aaKnown RBP9.4□□□□□ -0.9
PRDM16-207ENST00000512462 FOXC2Q99958 501 aa9.4□□□□□ -0.9
PRDM16-207ENST00000512462 ZNF256Q9Y2P7 627 aaPredicted RBP9.4□□□□□ -0.9
PRDM16-207ENST00000512462 IGHV4-38-2P0DP08 117 aa9.4□□□□□ -0.91
PRDM16-207ENST00000512462 ZNF414Q96IQ9 312 aa9.4□□□□□ -0.91
PRDM16-207ENST00000512462 IGKV1D-37A0A075B6S9 117 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 FAM181BA6NEQ2 426 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 TOMM40O96008 361 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 ZNF56Q15929 161 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 DUX3Q96PT4 197 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 PRSS46E5RG02 174 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 TMEM249Q2WGJ8 235 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 FAM159AQ6UWV7 190 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 SIGLEC15Q6ZMC9 328 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 LINC00322Q6ZN03 302 aaPredicted RBP9.39□□□□□ -0.91
PRDM16-207ENST00000512462 LINC00173Q6ZV60 143 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 C11orf52Q96A22 123 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 ZNF48Q96MX3 618 aaPredicted RBP9.39□□□□□ -0.91
PRDM16-207ENST00000512462 CFAP46Q8IYW2 2715 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 IGHV3-73A0A0B4J1V6 119 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 TRAV26-2A0A0B4J265 109 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 SMAGPQ0VAQ4 97 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 CR1LQ2VPA4 569 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 PSMG4Q5JS54 123 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 EBLN2Q6P2I7 272 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 OR4X2Q8NGF9 303 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 C20orf144Q9BQM9 153 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 MOB4Q9Y3A3 225 aa9.39□□□□□ -0.91
PRDM16-207ENST00000512462 TEX22C9J3V5 150 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 CD7P09564 240 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 LEPP41159 167 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 EMP1P54849 157 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 C1orf159Q96HA4 380 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 TRAV26-1A0A087WT03 109 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 HOXB4P17483 251 aaPredicted RBP9.38□□□□□ -0.91
PRDM16-207ENST00000512462 OR1N2Q8NGR9 330 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 NPFFR1Q9GZQ6 430 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 FLNCQ14315 2725 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 TRAV9-1A0A075B6T8 112 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 IGHV4-30-2A0A087WSY4 118 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 FNDC10F2Z333 226 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 NDUFA3O95167 84 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 TYMSP04818 313 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 MSRB1Q9NZV6 116 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 TP73-AS1Q9UF72 201 aa9.38□□□□□ -0.91
PRDM16-207ENST00000512462 SHISA2Q6UWI4 295 aa9.37□□□□□ -0.91
PRDM16-207ENST00000512462 ITLN2Q8WWU7 325 aaPredicted RBP9.37□□□□□ -0.91
PRDM16-207ENST00000512462 A0A087X0K7 114 aa9.37□□□□□ -0.91
PRDM16-207ENST00000512462 IGHV7-81A0A0B4J1V7 117 aa9.37□□□□□ -0.91
PRDM16-207ENST00000512462 H7C2G1 150 aa9.37□□□□□ -0.91
PRDM16-207ENST00000512462 IGHV4-39P01824 125 aa9.37□□□□□ -0.91
PRDM16-207ENST00000512462 UBE2E1P51965 193 aa9.37□□□□□ -0.91
PRDM16-207ENST00000512462 CRYBA4P53673 196 aa9.37□□□□□ -0.91
PRDM16-207ENST00000512462 YPEL3P61236 119 aaPredicted RBP9.37□□□□□ -0.91
PRDM16-207ENST00000512462 RPL24P83731 157 aaKnown RBP9.37□□□□□ -0.91
PRDM16-207ENST00000512462 MINOS1Q5TGZ0 78 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms