RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 C2orf70A6NJV1 201 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 FAM223BA6NKX1 122 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 IGHV3-11P01762 117 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 HERV-K104P63124 156 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 CFHR1Q03591 330 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 MRPL23Q16540 153 aaKnown RBP5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 LINC01620Q4KN68 170 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 FAM223AQ8IWN6 122 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 SPRR3Q9UBC9 169 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 SDHAF1A6NFY7 115 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 C15orf65H3BRN8 121 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 EFNA4P52798 201 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 Q6ZUT4 128 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 FDCSPQ8NFU4 85 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 RNF183Q96D59 192 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 TRAV13-1A0A0B4J241 112 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 H3BT86 120 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 RHODO00212 210 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 CTRLP40313 264 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 Q71RC1 249 aaPredicted RBP5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 M0R1W7 72 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 RSPO1Q2MKA7 263 aaPredicted RBP5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 CR1LQ2VPA4 569 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 LINC00311Q8N616 119 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 PIFOQ8TCI5 191 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 RNASE6Q93091 150 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 CHCHD5Q9BSY4 110 aa5.84□□□□□ -1.47
UBE2D3-224ENST00000508474 CACNA1DQ01668 2161 aa5.84□□□□□ -1.48
UBE2D3-224ENST00000508474 USMG5Q96IX5 58 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 PLXNA4Q9HCM2 1894 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 A0A087WWL8 130 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 RHOHQ15669 191 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 C6orf226Q5I0X4 101 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 IGFL4Q6B9Z1 124 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 KIAA0100Q14667 2235 aaKnown RBP5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 TRGV4A0A0C4DH28 118 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 TRBV10-2A0A0K0K1G8 114 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 PRB4P10163 310 aaPredicted RBP5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 STHQ8IWL8 128 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 TNS1Q9HBL0 1735 aaKnown RBP5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 RBAKDNA6NC62 111 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 BAALC-AS2P0C853 105 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 NDUFV3P56181 108 aaKnown RBP5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 ATP1A1-AS1Q5TC04 95 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 LTBP1Q14766 1721 aa5.83□□□□□ -1.48
UBE2D3-224ENST00000508474 KNCNA6PVL3 124 aa5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 WT1-ASQ06250 92 aa5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 C1orf159Q96HA4 380 aa5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 TMEM243Q9BU79 118 aa5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 TRAV26-2A0A0B4J265 109 aa5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 GATA4P43694 442 aa5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 SPANXB1Q9NS25 103 aaPredicted RBP5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 C17orf58Q2M2W7 97 aa5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 Q8TCH9 128 aa5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 TRBV6-1A0A0K0K1D8 114 aa5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 SPAARA0A1B0GVQ0 90 aa5.82□□□□□ -1.48
UBE2D3-224ENST00000508474 CHD3Q12873 2000 aaKnown RBP5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 FAM110DQ8TAY7 271 aaPredicted RBP5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 MRPL53Q96EL3 112 aaKnown RBP5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 LENEPQ9Y5L5 61 aa5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 A0A1B0GX51 115 aa5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 HERVK_113P63121 156 aa5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 VMO1Q7Z5L0 202 aa5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 ICOSQ9Y6W8 199 aa5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 FANCMQ8IYD8 2048 aa5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 E9PLD3 99 aa5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 HAMPP81172 84 aa5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 WDR86Q86TI4 376 aa5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 LINC01560Q8TB33 94 aa5.81□□□□□ -1.48
UBE2D3-224ENST00000508474 SCN5AQ14524 2016 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 IGHV3OR16-10A0A075B7F0 116 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 IGHV3-73A0A0B4J1V6 119 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 UQCRQO14949 82 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 EGR2P11161 476 aaPredicted RBP5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 C3orf36Q3SXR2 165 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 GTSF1Q8WW33 167 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 A4D1N5 150 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 NDPQ00604 133 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 SS18Q15532 418 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 DUX4L9Q6RFH8 374 aaPredicted RBP5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 LINC00643Q86TS7 51 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 C8orf31Q8N9H6 132 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 IGFBPL1Q8WX77 278 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 DSCR8Q96T75 97 aa5.8□□□□□ -1.48
UBE2D3-224ENST00000508474 A0A1B0GXF2 115 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 CD59P13987 128 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 GP9P14770 177 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 DSCR9P59020 149 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 ODF1Q14990 250 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 DEFB104AQ8WTQ1 72 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 ZNF524Q96C55 264 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 SPATA25Q9BR10 227 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 RHPN1-AS1Q9BWJ2 59 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 H0YGX0 51 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 THBDP07204 575 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 ASPHD1Q5U4P2 390 aa5.79□□□□□ -1.48
UBE2D3-224ENST00000508474 TM2D2Q9BX73 214 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms