RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CA1P00915 261 aaPredicted RBP14.69□□□□□ -0.06
CTSD-206ENST00000497544 IGKV2D-40P01614 121 aaPredicted RBP14.69□□□□□ -0.06
CTSD-206ENST00000497544 FXYD7P58549 80 aa14.69□□□□□ -0.06
CTSD-206ENST00000497544 ERCC8Q13216 396 aa14.69□□□□□ -0.06
CTSD-206ENST00000497544 CSMD3Q7Z407 3707 aa14.69□□□□□ -0.06
CTSD-206ENST00000497544 A8MTW9 85 aa14.68□□□□□ -0.06
CTSD-206ENST00000497544 NPIPB6E9PJ23 425 aa14.68□□□□□ -0.06
CTSD-206ENST00000497544 K7EQM0 130 aa14.68□□□□□ -0.06
CTSD-206ENST00000497544 IFNA1P01562 189 aa14.68□□□□□ -0.06
CTSD-206ENST00000497544 GNG5P63218 68 aa14.68□□□□□ -0.06
CTSD-206ENST00000497544 TMEM78Q5T7P6 136 aa14.68□□□□□ -0.06
CTSD-206ENST00000497544 C9orf47Q6ZRZ4 202 aa14.68□□□□□ -0.06
CTSD-206ENST00000497544 GOLT1AQ6ZVE7 132 aa14.68□□□□□ -0.06
CTSD-206ENST00000497544 LCE6AA0A183 80 aa14.67□□□□□ -0.06
CTSD-206ENST00000497544 SERTM2A0A1B0GWG4 89 aa14.67□□□□□ -0.06
CTSD-206ENST00000497544 F6UZH7 168 aa14.67□□□□□ -0.06
CTSD-206ENST00000497544 TCRAP04437 139 aa14.67□□□□□ -0.06
CTSD-206ENST00000497544 PMS2P11Q13670 270 aa14.67□□□□□ -0.06
CTSD-206ENST00000497544 VGLL1Q99990 258 aa14.67□□□□□ -0.06
CTSD-206ENST00000497544 C1QTNF4Q9BXJ3 329 aa14.67□□□□□ -0.06
CTSD-206ENST00000497544 AGPAT4-IT1Q9H0P7 198 aa14.67□□□□□ -0.06
CTSD-206ENST00000497544 SLC35B3Q9H1N7 401 aa14.67□□□□□ -0.06
CTSD-206ENST00000497544 ATP5G3P48201 142 aa14.66□□□□□ -0.06
CTSD-206ENST00000497544 CASC10Q5T4H9 136 aa14.66□□□□□ -0.06
CTSD-206ENST00000497544 AMTNQ6UX39 209 aa14.66□□□□□ -0.06
CTSD-206ENST00000497544 LYPD6BQ8NI32 183 aa14.66□□□□□ -0.06
CTSD-206ENST00000497544 XCL2Q9UBD3 114 aa14.66□□□□□ -0.06
CTSD-206ENST00000497544 STAB2Q8WWQ8 2551 aa14.65□□□□□ -0.06
CTSD-206ENST00000497544 AMBPP02760 352 aa14.65□□□□□ -0.06
CTSD-206ENST00000497544 CT45A10P0DMU9 189 aa14.65□□□□□ -0.06
CTSD-206ENST00000497544 TSPOP30536 169 aa14.65□□□□□ -0.06
CTSD-206ENST00000497544 Q6ZWC4 215 aa14.65□□□□□ -0.06
CTSD-206ENST00000497544 PCNPQ8WW12 178 aaKnown RBP14.65□□□□□ -0.06
CTSD-206ENST00000497544 HIST1H2BAQ96A08 127 aa14.65□□□□□ -0.06
CTSD-206ENST00000497544 TXNDC17Q9BRA2 123 aa14.65□□□□□ -0.06
CTSD-206ENST00000497544 ATG101Q9BSB4 218 aa14.65□□□□□ -0.06
CTSD-206ENST00000497544 C11orf94C9JXX5 98 aa14.64□□□□□ -0.07
CTSD-206ENST00000497544 TAGLN2P37802 199 aaKnown RBP14.64□□□□□ -0.07
CTSD-206ENST00000497544 LEPP41159 167 aa14.64□□□□□ -0.07
CTSD-206ENST00000497544 ZNF138P52744 262 aa14.64□□□□□ -0.07
CTSD-206ENST00000497544 SPINK13Q1W4C9 94 aa14.64□□□□□ -0.07
CTSD-206ENST00000497544 CCDC28AQ8IWP9 274 aa14.64□□□□□ -0.07
CTSD-206ENST00000497544 CYB561D1Q8N8Q1 229 aa14.64□□□□□ -0.07
CTSD-206ENST00000497544 TCEAL7Q9BRU2 100 aa14.64□□□□□ -0.07
CTSD-206ENST00000497544 ZMAT4Q9H898 229 aa14.64□□□□□ -0.07
CTSD-206ENST00000497544 ZNF492Q9P255 531 aa14.64□□□□□ -0.07
CTSD-206ENST00000497544 M0R2Z0 102 aa14.63□□□□□ -0.07
CTSD-206ENST00000497544 PEX7O00628 323 aa14.63□□□□□ -0.07
CTSD-206ENST00000497544 GIG44P09565 113 aaPredicted RBP14.63□□□□□ -0.07
CTSD-206ENST00000497544 NHLRC4P0CG21 123 aaPredicted RBP14.63□□□□□ -0.07
CTSD-206ENST00000497544 RAB14P61106 215 aa14.63□□□□□ -0.07
CTSD-206ENST00000497544 DEFB135Q30KP9 77 aa14.63□□□□□ -0.07
CTSD-206ENST00000497544 ZNF767PQ75MW2 155 aa14.63□□□□□ -0.07
CTSD-206ENST00000497544 RCHY1Q96PM5 261 aa14.63□□□□□ -0.07
CTSD-206ENST00000497544 ODF3Q96PU9 254 aa14.63□□□□□ -0.07
CTSD-206ENST00000497544 SPATA25Q9BR10 227 aa14.63□□□□□ -0.07
CTSD-206ENST00000497544 U3KQK5 164 aa14.63□□□□□ -0.07
CTSD-206ENST00000497544 BCL2P10415 239 aa14.62□□□□□ -0.07
CTSD-206ENST00000497544 CDKN1BP46527 198 aa14.62□□□□□ -0.07
CTSD-206ENST00000497544 SGK494Q96LW2 274 aa14.62□□□□□ -0.07
CTSD-206ENST00000497544 TM2D3Q9BRN9 247 aa14.62□□□□□ -0.07
CTSD-206ENST00000497544 VAX2Q9UIW0 290 aa14.62□□□□□ -0.07
CTSD-206ENST00000497544 TRAV8-1A0A0A6YYK1 113 aa14.61□□□□□ -0.07
CTSD-206ENST00000497544 FBLL1A6NHQ2 334 aaKnown RBP14.61□□□□□ -0.07
CTSD-206ENST00000497544 J3KRW8 73 aa14.61□□□□□ -0.07
CTSD-206ENST00000497544 SPRY2O43597 315 aa14.61□□□□□ -0.07
CTSD-206ENST00000497544 TMEM75Q8N9X5 138 aa14.61□□□□□ -0.07
CTSD-206ENST00000497544 RNF183Q96D59 192 aa14.61□□□□□ -0.07
CTSD-206ENST00000497544 RYR1P21817 5038 aa14.61□□□□□ -0.07
CTSD-206ENST00000497544 TRAV12-2A0A075B6T6 113 aa14.6□□□□□ -0.07
CTSD-206ENST00000497544 NMBP08949 121 aa14.6□□□□□ -0.07
CTSD-206ENST00000497544 FLI1Q01543 452 aaPredicted RBP14.6□□□□□ -0.07
CTSD-206ENST00000497544 IFITM2Q01629 132 aa14.6□□□□□ -0.07
CTSD-206ENST00000497544 Q8TAT8 98 aa14.6□□□□□ -0.07
CTSD-206ENST00000497544 IGF2BP2-AS1Q96M15 143 aa14.6□□□□□ -0.07
CTSD-206ENST00000497544 PSG8Q9UQ74 426 aa14.6□□□□□ -0.07
CTSD-206ENST00000497544 TP53TG1Q9Y2A0 90 aa14.6□□□□□ -0.07
CTSD-206ENST00000497544 LENEPQ9Y5L5 61 aa14.6□□□□□ -0.07
CTSD-206ENST00000497544 TRAV34A0A0B4J273 112 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 TRBV7-9A0A0J9YWB2 115 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 LOC102723971A0A1B0GUV8 181 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 RBFOX3A6NFN3 312 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 GPX1P07203 203 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 AKR1C3P42330 323 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 MEF2BQ02080 365 aaPredicted RBP14.59□□□□□ -0.07
CTSD-206ENST00000497544 PRNTQ86SH4 94 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 CSNK1G2-AS1Q8NCQ2 148 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 FAM19A4Q96LR4 140 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 LINC00479Q96M42 142 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 NDFIP1Q9BT67 221 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 RETNQ9HD89 108 aa14.59□□□□□ -0.07
CTSD-206ENST00000497544 SCO2A0A1W2PP80 73 aa14.58□□□□□ -0.08
CTSD-206ENST00000497544 CRXO43186 299 aaPredicted RBP14.58□□□□□ -0.08
CTSD-206ENST00000497544 INSP01308 110 aa14.58□□□□□ -0.08
CTSD-206ENST00000497544 CRISP2P16562 243 aa14.58□□□□□ -0.08
CTSD-206ENST00000497544 UBE2G1P62253 170 aa14.58□□□□□ -0.08
CTSD-206ENST00000497544 RARRES2Q99969 163 aa14.58□□□□□ -0.08
CTSD-206ENST00000497544 OVOL2Q9BRP0 275 aa14.58□□□□□ -0.08
CTSD-206ENST00000497544 EIF5A2Q9GZV4 153 aaKnown RBP14.58□□□□□ -0.08
CTSD-206ENST00000497544 TREM1Q9NP99 234 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms