RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 GABARAPH6UMI1 98 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 K7EIL1 84 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 TRACP01848 142 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 G0S2P27469 103 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 GNG10P50151 68 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 RPL37AP61513 92 aaKnown RBP0.45□□□□□ -2.34
CD46-218ENST00000496723 ZCCHC23Q6ZST2 131 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 STX12Q86Y82 276 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 LINC00269Q8N2A0 174 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 OR5H6Q8NGV6 325 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 GRPEL2Q8TAA5 225 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 CCDC32Q9BV29 185 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 LRTM1Q9HBL6 345 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 IL20Q9NYY1 176 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 ATPIF1Q9UII2 106 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 PBRM1Q86U86 1689 aa0.45□□□□□ -2.34
CD46-218ENST00000496723 AFDNP55196 1824 aaKnown RBP0.45□□□□□ -2.34
CD46-218ENST00000496723 DLC1Q96QB1 1528 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 TCOF1Q13428 1488 aaKnown RBP0.44□□□□□ -2.34
CD46-218ENST00000496723 KMT2DO14686 5537 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 A0A0J9YY99 117 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 FAM107AO95990 144 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 BCL2P10415 239 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 TPT1P13693 172 aaKnown RBP0.44□□□□□ -2.34
CD46-218ENST00000496723 PDE6GP18545 87 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 SDC2P34741 201 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 SPINT3P49223 89 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 FXYD4P59646 89 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 NEDD8Q15843 81 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 Q86TA4 180 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 ANGPTL5Q86XS5 388 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 C10orf111Q8N326 155 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 C5orf17Q8NAS9 161 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 CCL4L1Q8NHW4 92 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 DIRC1Q969H9 104 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 PRELID3AQ96N28 172 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 LIMD2Q9BT23 127 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 PCBD2Q9H0N5 130 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 CACNA1EQ15878 2313 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 LOC285556D6RIA3 1793 aa0.44□□□□□ -2.34
CD46-218ENST00000496723 NAV3Q8IVL0 2385 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 C3orf85A0A1B0GTC6 90 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 E7EQ34 232 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 SULT1C4O75897 302 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 SAA1P0DJI8 122 aaPredicted RBP0.43□□□□□ -2.34
CD46-218ENST00000496723 NEFHP12036 1026 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 CCL4P13236 92 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 KDELR1P24390 212 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 S100A11P31949 105 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 ZNF137PP52743 207 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 MAXP61244 160 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 TMEM78Q5T7P6 136 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 CLEC2BQ92478 149 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 CARD19Q96LW7 228 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 CIB3Q96Q77 187 aaPredicted RBP0.43□□□□□ -2.34
CD46-218ENST00000496723 JPT1Q9UK76 154 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 V9GYQ6 96 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 USP24Q9UPU5 2620 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 CTTNBP2Q8WZ74 1663 aa0.43□□□□□ -2.34
CD46-218ENST00000496723 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
CD46-218ENST00000496723 A0A0D9SG42 100 aa0.42□□□□□ -2.34
CD46-218ENST00000496723 H7BYZ3 331 aa0.42□□□□□ -2.34
CD46-218ENST00000496723 SRP9P49458 86 aaKnown RBP0.42□□□□□ -2.34
CD46-218ENST00000496723 C6orf52Q5T4I8 152 aa0.42□□□□□ -2.34
CD46-218ENST00000496723 RMND5BQ96G75 393 aaPredicted RBP0.42□□□□□ -2.34
CD46-218ENST00000496723 LXNQ9BS40 222 aa0.42□□□□□ -2.34
CD46-218ENST00000496723 LPAR5Q9H1C0 372 aa0.42□□□□□ -2.34
CD46-218ENST00000496723 XIRP1Q702N8 1843 aaKnown RBP0.41□□□□□ -2.34
CD46-218ENST00000496723 A0A1B0GV72 72 aa0.41□□□□□ -2.34
CD46-218ENST00000496723 LOC107986453A0A1B0GWG9 222 aa0.41□□□□□ -2.34
CD46-218ENST00000496723 ARL5CA6NH57 179 aa0.41□□□□□ -2.34
CD46-218ENST00000496723 A6NN06 94 aa0.41□□□□□ -2.34
CD46-218ENST00000496723 BBIP1A8MTZ0 92 aa0.41□□□□□ -2.34
CD46-218ENST00000496723 IGHV3-30P01768 117 aa0.41□□□□□ -2.34
CD46-218ENST00000496723 IGHV3-30-5P0DP03 117 aa0.41□□□□□ -2.34
CD46-218ENST00000496723 LINC00305Q7Z4B0 112 aa0.41□□□□□ -2.34
CD46-218ENST00000496723 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.41□□□□□ -2.34
CD46-218ENST00000496723 CCL19Q99731 98 aa0.41□□□□□ -2.34
CD46-218ENST00000496723 TAF9BQ9HBM6 251 aa0.41□□□□□ -2.34
CD46-218ENST00000496723 NAV2Q8IVL1 2488 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 TRAV13-1A0A0B4J241 112 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 TRBV27A0A0K0K1C4 114 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 RPS3P23396 243 aaKnown RBP eCLIP0.4□□□□□ -2.35
CD46-218ENST00000496723 S100A5P33763 92 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 CAV3P56539 151 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 SPINK7P58062 85 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 LSM3P62310 102 aaKnown RBP0.4□□□□□ -2.35
CD46-218ENST00000496723 CCSMST1Q4G0I0 132 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 IZUMO2Q6UXV1 221 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 C3orf62Q6ZUJ4 267 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 TCTEX1D1Q8N7M0 179 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 CENPHQ9H3R5 247 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 PLAC8Q9NZF1 115 aa0.4□□□□□ -2.35
CD46-218ENST00000496723 FGD6Q6ZV73 1430 aa0.39□□□□□ -2.35
CD46-218ENST00000496723 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.39□□□□□ -2.35
CD46-218ENST00000496723 TRBV7-6A0A0J9YX20 115 aa0.39□□□□□ -2.35
CD46-218ENST00000496723 A0A1W2PRE2 83 aa0.39□□□□□ -2.35
CD46-218ENST00000496723 GYPBP06028 91 aa0.39□□□□□ -2.35
CD46-218ENST00000496723 DNAJB13P59910 316 aa0.39□□□□□ -2.35
CD46-218ENST00000496723 SNRPD3P62318 126 aaKnown RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms