RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 SH2D1AO60880 128 aa9.62□□□□□ -0.87
PHF3-205ENST00000494284 RHOGP84095 191 aa9.62□□□□□ -0.87
PHF3-205ENST00000494284 RNF5Q99942 180 aa9.62□□□□□ -0.87
PHF3-205ENST00000494284 SMAD5-AS1Q9Y6J3 95 aa9.62□□□□□ -0.87
PHF3-205ENST00000494284 OVOL3O00110 214 aa9.62□□□□□ -0.87
PHF3-205ENST00000494284 ORM1P02763 201 aa9.62□□□□□ -0.87
PHF3-205ENST00000494284 GOLT1BQ9Y3E0 138 aa9.62□□□□□ -0.87
PHF3-205ENST00000494284 SETD2Q9BYW2 2564 aaPredicted RBP9.62□□□□□ -0.87
PHF3-205ENST00000494284 WI2-2373I1.2A0A1W2PRP0 233 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 TMEM189A5PLL7 270 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 NPIPB6E9PJ23 425 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 DLEU1O43261 78 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 TCF21O43680 179 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 CSN1S1P47710 185 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 DEFB1P60022 68 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 NPFFO15130 113 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 TWIST1Q15672 202 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 COL5A1-AS1Q5SY13 56 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 TTC9CQ8N5M4 171 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 M0QZK8 103 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 TRBV12-3P01733 135 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 UBE2E1P51965 193 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 KLHDC1Q8N7A1 406 aa9.61□□□□□ -0.87
PHF3-205ENST00000494284 NF1P21359 2839 aa9.6□□□□□ -0.87
PHF3-205ENST00000494284 HAX1O00165 279 aa9.6□□□□□ -0.87
PHF3-205ENST00000494284 AVPP01185 164 aa9.6□□□□□ -0.87
PHF3-205ENST00000494284 MPV17L2Q567V2 206 aa9.6□□□□□ -0.87
PHF3-205ENST00000494284 CCDC144NLQ6NUI1 221 aa9.6□□□□□ -0.87
PHF3-205ENST00000494284 CCDC140Q96MF4 163 aa9.6□□□□□ -0.87
PHF3-205ENST00000494284 BBC3Q96PG8 261 aaPredicted RBP9.6□□□□□ -0.87
PHF3-205ENST00000494284 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
PHF3-205ENST00000494284 CT83Q5H943 113 aa9.6□□□□□ -0.87
PHF3-205ENST00000494284 CCL19Q99731 98 aa9.6□□□□□ -0.87
PHF3-205ENST00000494284 AKAP9Q99996 3911 aa9.6□□□□□ -0.87
PHF3-205ENST00000494284 CCDC168Q8NDH2 2452 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 FA2HQ7L5A8 372 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 C18orf15Q96N68 181 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 RABAC1Q9UI14 185 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 ZFP30Q9Y2G7 519 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 NAV2Q8IVL1 2488 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 IGHV3-11P01762 117 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 IGHG4P01861 327 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 EVI2AP22794 236 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 ATP5J2P56134 94 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 RIGQ13278 110 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 TMEM95Q3KNT9 176 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 SMIM12Q96EX1 92 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 THYN1Q9P016 225 aa9.59□□□□□ -0.87
PHF3-205ENST00000494284 A0A087X0K7 114 aa9.58□□□□□ -0.88
PHF3-205ENST00000494284 GATA1P15976 413 aaPredicted RBP9.58□□□□□ -0.88
PHF3-205ENST00000494284 BLCAPP62952 87 aa9.58□□□□□ -0.88
PHF3-205ENST00000494284 PIFOQ8TCI5 191 aa9.58□□□□□ -0.88
PHF3-205ENST00000494284 PRR25Q96S07 402 aa9.58□□□□□ -0.88
PHF3-205ENST00000494284 MAP1LC3CQ9BXW4 147 aa9.58□□□□□ -0.88
PHF3-205ENST00000494284 MYO9AB2RTY4 2548 aa9.58□□□□□ -0.88
PHF3-205ENST00000494284 EBI3Q14213 229 aa9.58□□□□□ -0.88
PHF3-205ENST00000494284 HIST2H2BDQ6DRA6 164 aa9.58□□□□□ -0.88
PHF3-205ENST00000494284 IL17RELQ6ZVW7 336 aa9.58□□□□□ -0.88
PHF3-205ENST00000494284 NDFIP1Q9BT67 221 aa9.58□□□□□ -0.88
PHF3-205ENST00000494284 NUDT3O95989 172 aa9.57□□□□□ -0.88
PHF3-205ENST00000494284 OR5AL1P0C617 328 aa9.57□□□□□ -0.88
PHF3-205ENST00000494284 EDN2P20800 178 aa9.57□□□□□ -0.88
PHF3-205ENST00000494284 FAM162BQ5T6X4 162 aa9.57□□□□□ -0.88
PHF3-205ENST00000494284 MINOS1Q5TGZ0 78 aa9.57□□□□□ -0.88
PHF3-205ENST00000494284 C1orf122Q6ZSJ8 110 aa9.57□□□□□ -0.88
PHF3-205ENST00000494284 DEFB104AQ8WTQ1 72 aa9.57□□□□□ -0.88
PHF3-205ENST00000494284 MINOS1-NBL1R4GNA1 71 aa9.57□□□□□ -0.88
PHF3-205ENST00000494284 RPL7P18124 248 aaKnown RBP9.57□□□□□ -0.88
PHF3-205ENST00000494284 PRELID3AQ96N28 172 aa9.57□□□□□ -0.88
PHF3-205ENST00000494284 SIGLEC8Q9NYZ4 499 aa9.57□□□□□ -0.88
PHF3-205ENST00000494284 NOTCH3Q9UM47 2321 aa9.56□□□□□ -0.88
PHF3-205ENST00000494284 TRAV30A0A087WSZ9 112 aa9.56□□□□□ -0.88
PHF3-205ENST00000494284 PRSS57Q6UWY2 283 aa9.56□□□□□ -0.88
PHF3-205ENST00000494284 C5orf56Q8N8D9 126 aa9.56□□□□□ -0.88
PHF3-205ENST00000494284 CHCHD1Q96BP2 118 aaKnown RBP9.56□□□□□ -0.88
PHF3-205ENST00000494284 KLK15Q9H2R5 256 aa9.56□□□□□ -0.88
PHF3-205ENST00000494284 CLPSL1A2RUU4 121 aa9.56□□□□□ -0.88
PHF3-205ENST00000494284 NPYP01303 97 aa9.56□□□□□ -0.88
PHF3-205ENST00000494284 CKS2P33552 79 aa9.56□□□□□ -0.88
PHF3-205ENST00000494284 MRPL51Q4U2R6 128 aaKnown RBP9.56□□□□□ -0.88
PHF3-205ENST00000494284 ZNF502Q8TBZ5 544 aa9.56□□□□□ -0.88
PHF3-205ENST00000494284 APCP25054 2843 aa9.55□□□□□ -0.88
PHF3-205ENST00000494284 CBY3A6NI87 242 aa9.55□□□□□ -0.88
PHF3-205ENST00000494284 C10orf99Q6UWK7 81 aa9.55□□□□□ -0.88
PHF3-205ENST00000494284 UBR5O95071 2799 aaPredicted RBP9.55□□□□□ -0.88
PHF3-205ENST00000494284 TENM4Q6N022 2769 aa9.55□□□□□ -0.88
PHF3-205ENST00000494284 TRAV26-2A0A0B4J265 109 aa9.55□□□□□ -0.88
PHF3-205ENST00000494284 HSBP1L1C9JCN9 74 aa9.55□□□□□ -0.88
PHF3-205ENST00000494284 H3BUX3 64 aa9.55□□□□□ -0.88
PHF3-205ENST00000494284 UNQ9165/PRO28630Q6UXU0 137 aa9.55□□□□□ -0.88
PHF3-205ENST00000494284 FER1L6-AS1Q8NA97 138 aa9.55□□□□□ -0.88
PHF3-205ENST00000494284 SRSF8Q9BRL6 282 aaKnown RBP9.55□□□□□ -0.88
PHF3-205ENST00000494284 NIPBLQ6KC79 2804 aaeCLIP9.55□□□□□ -0.886e-6■■□□□ 12.8
PHF3-205ENST00000494284 IGF1P05019 195 aa9.54□□□□□ -0.88
PHF3-205ENST00000494284 RPL11P62913 178 aaKnown RBP9.54□□□□□ -0.88
PHF3-205ENST00000494284 TMEM191AQ9H0A3 160 aa9.54□□□□□ -0.88
PHF3-205ENST00000494284 ZFAND3Q9H8U3 227 aa9.54□□□□□ -0.88
PHF3-205ENST00000494284 RNF24Q9Y225 148 aa9.54□□□□□ -0.88
PHF3-205ENST00000494284 A0A096LNJ9 63 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms