RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 LENEPQ9Y5L5 61 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 KIR2DL5BA0A0G2JN68 375 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 KIR2DL5BA0A0G2JPC4 375 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 RAB19A4D1S5 217 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 KNCNA6PVL3 124 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 A8MTW9 85 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 TMEM250H0YL14 139 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 ATP5G3P48201 142 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 CNN1P51911 297 aaKnown RBP9.19□□□□□ -0.94
SNX17-208ENST00000493711 TRPT1Q86TN4 253 aaKnown RBP9.19□□□□□ -0.94
SNX17-208ENST00000493711 KIR2DL5AQ8N109 375 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 TMEM75Q8N9X5 138 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 KIR2DL5BQ8NHK3 375 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 PCNPQ8WW12 178 aaKnown RBP9.19□□□□□ -0.94
SNX17-208ENST00000493711 C11orf52Q96A22 123 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 FMC1Q96HJ9 113 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 AURKAIP1Q9NWT8 199 aaPredicted RBP9.19□□□□□ -0.94
SNX17-208ENST00000493711 RPH3ALQ9UNE2 315 aa9.19□□□□□ -0.94
SNX17-208ENST00000493711 NOTCH1P46531 2555 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 PRKDCP78527 4128 aaKnown RBP9.18□□□□□ -0.94
SNX17-208ENST00000493711 LOC102724200A0A096LPH7 203 aaPredicted RBP9.18□□□□□ -0.94
SNX17-208ENST00000493711 TRBV6-1A0A0K0K1D8 114 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 PRAC2D3DTV9 90 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 F6UB75 175 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 IGHV4-30-4P0DP06 118 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 LEPP41159 167 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 AKR1C3P42330 323 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 ZNF138P52744 262 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 APOC4P55056 127 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 UBE2G1P62253 170 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 TOR2AQ5JU69 321 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 OR4B1Q8NGF8 309 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 C1QTNF4Q9BXJ3 329 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 KLF12Q9Y4X4 402 aa9.18□□□□□ -0.94
SNX17-208ENST00000493711 IGKV2-40A0A087WW87 121 aaPredicted RBP9.17□□□□□ -0.94
SNX17-208ENST00000493711 UBE2CO00762 179 aa9.17□□□□□ -0.94
SNX17-208ENST00000493711 IGKV2D-40P01614 121 aaPredicted RBP9.17□□□□□ -0.94
SNX17-208ENST00000493711 GNG5P63218 68 aa9.17□□□□□ -0.94
SNX17-208ENST00000493711 SAPCD1Q5SSQ6 148 aa9.17□□□□□ -0.94
SNX17-208ENST00000493711 CITED4Q96RK1 184 aa9.17□□□□□ -0.94
SNX17-208ENST00000493711 RARRES2Q99969 163 aa9.17□□□□□ -0.94
SNX17-208ENST00000493711 AGPAT4-IT1Q9H0P7 198 aa9.17□□□□□ -0.94
SNX17-208ENST00000493711 SCO2A0A1W2PP80 73 aa9.16□□□□□ -0.94
SNX17-208ENST00000493711 TAS2R60P59551 318 aa9.16□□□□□ -0.94
SNX17-208ENST00000493711 FLI1Q01543 452 aaPredicted RBP9.16□□□□□ -0.94
SNX17-208ENST00000493711 ZNF124Q15973 351 aa9.16□□□□□ -0.94
SNX17-208ENST00000493711 GDF5OSQ5U4N7 250 aa9.16□□□□□ -0.94
SNX17-208ENST00000493711 UQCC3Q6UW78 93 aa9.16□□□□□ -0.94
SNX17-208ENST00000493711 C2CD4CQ8TF44 421 aa9.16□□□□□ -0.94
SNX17-208ENST00000493711 WFDC10AQ9H1F0 79 aa9.16□□□□□ -0.94
SNX17-208ENST00000493711 ZNF492Q9P255 531 aa9.16□□□□□ -0.94
SNX17-208ENST00000493711 ZFP30Q9Y2G7 519 aa9.16□□□□□ -0.94
SNX17-208ENST00000493711 NBEAL2Q6ZNJ1 2754 aa9.16□□□□□ -0.94
SNX17-208ENST00000493711 LINC00862A6NCI5 91 aa9.15□□□□□ -0.94
SNX17-208ENST00000493711 K7EIL1 84 aa9.15□□□□□ -0.94
SNX17-208ENST00000493711 ZNF705DP0CH99 300 aaPredicted RBP9.15□□□□□ -0.94
SNX17-208ENST00000493711 ZNF705BP0CI00 300 aaPredicted RBP9.15□□□□□ -0.94
SNX17-208ENST00000493711 CT45A10P0DMU9 189 aa9.15□□□□□ -0.94
SNX17-208ENST00000493711 CRISP2P16562 243 aa9.15□□□□□ -0.94
SNX17-208ENST00000493711 DEFB1P60022 68 aa9.15□□□□□ -0.94
SNX17-208ENST00000493711 ERCC8Q13216 396 aa9.15□□□□□ -0.94
SNX17-208ENST00000493711 TMEM183BQ1AE95 376 aa9.15□□□□□ -0.94
SNX17-208ENST00000493711 LINC00322Q6ZN03 302 aaPredicted RBP9.15□□□□□ -0.94
SNX17-208ENST00000493711 VGLL1Q99990 258 aa9.15□□□□□ -0.94
SNX17-208ENST00000493711 SSBP4Q9BWG4 385 aaPredicted RBP9.15□□□□□ -0.94
SNX17-208ENST00000493711 CSTL1Q9H114 145 aa9.15□□□□□ -0.94
SNX17-208ENST00000493711 PSG8Q9UQ74 426 aa9.15□□□□□ -0.94
SNX17-208ENST00000493711 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
SNX17-208ENST00000493711 RPL35AP18077 110 aaKnown RBP9.14□□□□□ -0.95
SNX17-208ENST00000493711 CDKN1BP46527 198 aa9.14□□□□□ -0.95
SNX17-208ENST00000493711 FAM74A3Q4VXF1 159 aa9.14□□□□□ -0.95
SNX17-208ENST00000493711 DEFB121Q5J5C9 76 aa9.14□□□□□ -0.95
SNX17-208ENST00000493711 AMTNQ6UX39 209 aa9.14□□□□□ -0.95
SNX17-208ENST00000493711 SMIM12Q96EX1 92 aa9.14□□□□□ -0.95
SNX17-208ENST00000493711 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
SNX17-208ENST00000493711 SLC35B3Q9H1N7 401 aa9.14□□□□□ -0.95
SNX17-208ENST00000493711 RBMY1BA6NDE4 496 aaKnown RBP9.13□□□□□ -0.95
SNX17-208ENST00000493711 RBMY1EA6NEQ0 496 aaKnown RBP9.13□□□□□ -0.95
SNX17-208ENST00000493711 LTAP01374 205 aa9.13□□□□□ -0.95
SNX17-208ENST00000493711 IGLV2-11P01706 119 aa9.13□□□□□ -0.95
SNX17-208ENST00000493711 SRP19P09132 144 aaKnown RBP9.13□□□□□ -0.95
SNX17-208ENST00000493711 RBMY1DP0C7P1 496 aaKnown RBP9.13□□□□□ -0.95
SNX17-208ENST00000493711 FRMD6-AS1P0C7T7 363 aa9.13□□□□□ -0.95
SNX17-208ENST00000493711 RPL35P42766 123 aaKnown RBP9.13□□□□□ -0.95
SNX17-208ENST00000493711 PRNTQ86SH4 94 aa9.13□□□□□ -0.95
SNX17-208ENST00000493711 Q86TA4 180 aa9.13□□□□□ -0.95
SNX17-208ENST00000493711 EIF4E3Q8N5X7 224 aaKnown RBP9.13□□□□□ -0.95
SNX17-208ENST00000493711 C20orf144Q9BQM9 153 aa9.13□□□□□ -0.95
SNX17-208ENST00000493711 TREM1Q9NP99 234 aa9.13□□□□□ -0.95
SNX17-208ENST00000493711 BIN3Q9NQY0 253 aa9.13□□□□□ -0.95
SNX17-208ENST00000493711 KMT2CQ8NEZ4 4911 aaKnown RBP9.12□□□□□ -0.95
SNX17-208ENST00000493711 TRAV8-1A0A0A6YYK1 113 aa9.12□□□□□ -0.95
SNX17-208ENST00000493711 TRAV34A0A0B4J273 112 aa9.12□□□□□ -0.95
SNX17-208ENST00000493711 CA1P00915 261 aaPredicted RBP9.12□□□□□ -0.95
SNX17-208ENST00000493711 PRB2P02812 416 aaPredicted RBP9.12□□□□□ -0.95
SNX17-208ENST00000493711 GPX1P07203 203 aa9.12□□□□□ -0.95
SNX17-208ENST00000493711 NDUFA5Q16718 116 aa9.12□□□□□ -0.95
SNX17-208ENST00000493711 SMUG1Q53HV7 270 aa9.12□□□□□ -0.95
SNX17-208ENST00000493711 COX8CQ7Z4L0 72 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms