RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 BLOC1S1P78537 153 aa11.54□□□□□ -0.56
TRA2A-208ENST00000490942 TMEM78Q5T7P6 136 aa11.54□□□□□ -0.56
TRA2A-208ENST00000490942 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
TRA2A-208ENST00000490942 HIST1H2BAQ96A08 127 aa11.54□□□□□ -0.56
TRA2A-208ENST00000490942 FAM19A4Q96LR4 140 aa11.54□□□□□ -0.56
TRA2A-208ENST00000490942 AGPAT4-IT1Q9H0P7 198 aa11.54□□□□□ -0.56
TRA2A-208ENST00000490942 SLC35B3Q9H1N7 401 aa11.54□□□□□ -0.56
TRA2A-208ENST00000490942 TCRAP04437 139 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 CT45A10P0DMU9 189 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 CRISP2P16562 243 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 ALKAL2Q6UX46 152 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 ZNF705AQ6ZN79 300 aaPredicted RBP11.53□□□□□ -0.56
TRA2A-208ENST00000490942 CCDC28AQ8IWP9 274 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 NEU1Q99519 415 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 TXNDC17Q9BRA2 123 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 MANBALQ9NQG1 85 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 ZNF492Q9P255 531 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 XCL2Q9UBD3 114 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 EPDR1Q9UM22 224 aa11.53□□□□□ -0.56
TRA2A-208ENST00000490942 YTHDF2Q9Y5A9 579 aaKnown RBP11.53□□□□□ -0.56
TRA2A-208ENST00000490942 IGKV2-40A0A087WW87 121 aaPredicted RBP11.52□□□□□ -0.57
TRA2A-208ENST00000490942 SMIM9A6NGZ8 99 aa11.52□□□□□ -0.57
TRA2A-208ENST00000490942 CRXO43186 299 aaPredicted RBP11.52□□□□□ -0.57
TRA2A-208ENST00000490942 INSP01308 110 aa11.52□□□□□ -0.57
TRA2A-208ENST00000490942 IGKV2D-40P01614 121 aaPredicted RBP11.52□□□□□ -0.57
TRA2A-208ENST00000490942 TAGLN2P37802 199 aaKnown RBP11.52□□□□□ -0.57
TRA2A-208ENST00000490942 ZNF138P52744 262 aa11.52□□□□□ -0.57
TRA2A-208ENST00000490942 SPINK13Q1W4C9 94 aa11.52□□□□□ -0.57
TRA2A-208ENST00000490942 TMEM256Q8N2U0 113 aa11.52□□□□□ -0.57
TRA2A-208ENST00000490942 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.57
TRA2A-208ENST00000490942 RARRES2Q99969 163 aa11.52□□□□□ -0.57
TRA2A-208ENST00000490942 ATG101Q9BSB4 218 aa11.52□□□□□ -0.57
TRA2A-208ENST00000490942 GOLT1BQ9Y3E0 138 aa11.52□□□□□ -0.57
TRA2A-208ENST00000490942 KLLNB2CW77 178 aa11.51□□□□□ -0.57
TRA2A-208ENST00000490942 F6UZH7 168 aa11.51□□□□□ -0.57
TRA2A-208ENST00000490942 OR11H2Q8NH07 326 aa11.51□□□□□ -0.57
TRA2A-208ENST00000490942 LYPD6BQ8NI32 183 aa11.51□□□□□ -0.57
TRA2A-208ENST00000490942 VGLL1Q99990 258 aa11.51□□□□□ -0.57
TRA2A-208ENST00000490942 STAB2Q8WWQ8 2551 aa11.51□□□□□ -0.57
TRA2A-208ENST00000490942 M0R2Z0 102 aa11.5□□□□□ -0.57
TRA2A-208ENST00000490942 MIFP14174 115 aa11.5□□□□□ -0.57
TRA2A-208ENST00000490942 UBE2G2P60604 165 aa11.5□□□□□ -0.57
TRA2A-208ENST00000490942 TEX261Q6UWH6 196 aa11.5□□□□□ -0.57
TRA2A-208ENST00000490942 GOLT1AQ6ZVE7 132 aa11.5□□□□□ -0.57
TRA2A-208ENST00000490942 TMEM75Q8N9X5 138 aa11.5□□□□□ -0.57
TRA2A-208ENST00000490942 RETNQ9HD89 108 aa11.5□□□□□ -0.57
TRA2A-208ENST00000490942 HUWE1Q7Z6Z7 4374 aaKnown RBP11.49□□□□□ -0.57
TRA2A-208ENST00000490942 PAGE4O60829 102 aa11.49□□□□□ -0.57
TRA2A-208ENST00000490942 IFNA1P01562 189 aa11.49□□□□□ -0.57
TRA2A-208ENST00000490942 IFNA7P01567 189 aa11.49□□□□□ -0.57
TRA2A-208ENST00000490942 FXYD7P58549 80 aa11.49□□□□□ -0.57
TRA2A-208ENST00000490942 ERCC8Q13216 396 aa11.49□□□□□ -0.57
TRA2A-208ENST00000490942 CST9LP1Q5W188 147 aa11.49□□□□□ -0.57
TRA2A-208ENST00000490942 C1orf158Q8N1D5 194 aa11.49□□□□□ -0.57
TRA2A-208ENST00000490942 PEX7O00628 323 aa11.48□□□□□ -0.57
TRA2A-208ENST00000490942 GNG5P63218 68 aa11.48□□□□□ -0.57
TRA2A-208ENST00000490942 ZFAND2AQ8N6M9 145 aa11.48□□□□□ -0.57
TRA2A-208ENST00000490942 C11orf68Q9H3H3 251 aaKnown RBP11.48□□□□□ -0.57
TRA2A-208ENST00000490942 EDA2RQ9HAV5 297 aa11.48□□□□□ -0.57
TRA2A-208ENST00000490942 KLF12Q9Y4X4 402 aa11.48□□□□□ -0.57
TRA2A-208ENST00000490942 X6R8D5 127 aa11.48□□□□□ -0.57
TRA2A-208ENST00000490942 NBEAL2Q6ZNJ1 2754 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 TENM3Q9P273 2699 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 TRBV6-1A0A0K0K1D8 114 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 H7BYZ3 331 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 S100A9P06702 114 aaKnown RBP11.47□□□□□ -0.57
TRA2A-208ENST00000490942 CCL20P78556 96 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 SAPCD1Q5SSQ6 148 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 GFI1BQ5VTD9 330 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 ZNF680Q8NEM1 530 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 NDFIP1Q9BT67 221 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 GNG13Q9P2W3 67 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 RPH3ALQ9UNE2 315 aa11.47□□□□□ -0.57
TRA2A-208ENST00000490942 TGP01266 2768 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 TRAV12-2A0A075B6T6 113 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 A0A1B0GV50 99 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 C7orf71A4D174 169 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 TMEM189A5PLL7 270 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 C11orf94C9JXX5 98 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 IGLV2-11P01706 119 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 GPX1P07203 203 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 TAS2R60P59551 318 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 FLI1Q01543 452 aaPredicted RBP11.46□□□□□ -0.57
TRA2A-208ENST00000490942 Q8NAQ8 132 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 LINC00467Q9BRT7 94 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 NIPSNAP3BQ9BS92 247 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 TMEM208Q9BTX3 173 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 PSG8Q9UQ74 426 aa11.46□□□□□ -0.57
TRA2A-208ENST00000490942 NDUFS6O75380 124 aaKnown RBP11.45□□□□□ -0.58
TRA2A-208ENST00000490942 PRB4P10163 310 aaPredicted RBP11.45□□□□□ -0.58
TRA2A-208ENST00000490942 BCL2P10415 239 aa11.45□□□□□ -0.58
TRA2A-208ENST00000490942 ATP5G3P48201 142 aa11.45□□□□□ -0.58
TRA2A-208ENST00000490942 MEF2BQ02080 365 aaPredicted RBP11.45□□□□□ -0.58
TRA2A-208ENST00000490942 Q8TAT8 98 aa11.45□□□□□ -0.58
TRA2A-208ENST00000490942 FMC1Q96HJ9 113 aa11.45□□□□□ -0.58
TRA2A-208ENST00000490942 PYGO2Q9BRQ0 406 aa11.45□□□□□ -0.58
TRA2A-208ENST00000490942 TRAV8-1A0A0A6YYK1 113 aa11.44□□□□□ -0.58
TRA2A-208ENST00000490942 PDE6DO43924 150 aa11.44□□□□□ -0.58
TRA2A-208ENST00000490942 RBMY1A1P0DJD3 496 aaKnown RBP11.44□□□□□ -0.58
TRA2A-208ENST00000490942 RBMY1CP0DJD4 496 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms