RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CSMD3Q7Z407 3707 aa7.07□□□□□ -1.28
TMEM39A-208ENST00000486159 TRBV20OR9-2A0A075B6H5 130 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 TRBV19A0A075B6N1 114 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 LOC105371267A0A1B0GV96 52 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 PGPA6NDG6 321 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 K7EQM0 130 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 ISLRO14498 428 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 GGCTO75223 188 aaKnown RBP7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 TYMSP04818 313 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 CLEC3BP05452 202 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 IGLC2P0DOY2 106 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 ADMP35318 185 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 RANP62826 216 aaKnown RBP7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 USF2Q15853 346 aaPredicted RBP7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 OR9G4Q8NGQ1 327 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 CMTM2Q8TAZ6 248 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 FAM210BQ96KR6 192 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 IGF2BP2-AS1Q96M15 143 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 Q9H3A6 140 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 ZMAT4Q9H898 229 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 CLEC5AQ9NY25 188 aa7.06□□□□□ -1.28
TMEM39A-208ENST00000486159 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 LCE6AA0A183 80 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 MRPS12O15235 138 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 TCRAP04437 139 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 GPR183P32249 361 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 UBE2G1P62253 170 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 TOMM20LQ6UXN7 152 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 FAM231DQ6ZW35 169 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 BLNKQ8WV28 456 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 ZNF414Q96IQ9 312 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 CCDC140Q96MF4 163 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 METTL26Q96S19 204 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 FAM110AQ9BQ89 295 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 WFDC10AQ9H1F0 79 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 AAMDCQ9H7C9 122 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 SRD5A3Q9H8P0 318 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 ZNF586Q9NXT0 402 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 PEF1Q9UBV8 284 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 S4R3C0 116 aa7.05□□□□□ -1.28
TMEM39A-208ENST00000486159 A0A087X0K7 114 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 PPP5D1E7EU14 171 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 NDUFA4O00483 81 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 IGHV3-23P01764 117 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 RPS10P46783 165 aaKnown RBP7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 CSN1S1P47710 185 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 FAM3BP58499 235 aaPredicted RBP7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 COX19Q49B96 90 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 LEMD1Q68G75 181 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 CLEC19AQ6UXS0 136 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 BAGE2Q86Y30 109 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 OR8I2Q8N0Y5 310 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 IL36BQ9NZH7 164 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 URGCP-MRPS24S4R325 110 aa7.04□□□□□ -1.28
TMEM39A-208ENST00000486159 TGIF2-C20orf24A0A0A6YYL0 155 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 ZNF785A8K8V0 405 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 A8MZ25 164 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 K7EN84 100 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 S100A6P06703 90 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 CXCL1P09341 107 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 CD7P09564 240 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 ARL3P36405 182 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 ERVFC1-1P60608 527 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 SIGLEC15Q6ZMC9 328 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 TMEM75Q8N9X5 138 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 ZFP30Q9Y2G7 519 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 U3KQE9 123 aa7.03□□□□□ -1.28
TMEM39A-208ENST00000486159 A0A1W2PS18 150 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 RBMY1BA6NDE4 496 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 RBMY1EA6NEQ0 496 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 BUB3O43684 328 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 LTAP01374 205 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 IGLV2-8P01709 118 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 RBMY1DP0C7P1 496 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 RPEL1Q2QD12 228 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 CD300EQ496F6 205 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 LINC00322Q6ZN03 302 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 TMEM183AQ8IXX5 376 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 DEFB125Q8N687 156 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 GRAMD2BQ96HH9 432 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 SLC50A1Q9BRV3 221 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 ZNF492Q9P255 531 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 V9GYV3 84 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 STAB2Q8WWQ8 2551 aa7.02□□□□□ -1.29
TMEM39A-208ENST00000486159 PGPEP1LA6NFU8 196 aa7.01□□□□□ -1.29
TMEM39A-208ENST00000486159 BMI1P35226 326 aa7.01□□□□□ -1.29
TMEM39A-208ENST00000486159 CT83Q5H943 113 aa7.01□□□□□ -1.29
TMEM39A-208ENST00000486159 IBA57Q5T440 356 aaKnown RBP7.01□□□□□ -1.29
TMEM39A-208ENST00000486159 MRPL53Q96EL3 112 aaKnown RBP7.01□□□□□ -1.29
TMEM39A-208ENST00000486159 MLST8Q9BVC4 326 aa7.01□□□□□ -1.29
TMEM39A-208ENST00000486159 A0A1W2PPQ1 181 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 RBAKDNA6NC62 111 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 FAM231BA6NCW3 169 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 DIRC3C9JPN6 131 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 K7EMT4 169 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 GATCO43716 136 aaKnown RBP7□□□□□ -1.29
TMEM39A-208ENST00000486159 MGST1P10620 155 aaKnown RBP7□□□□□ -1.29
TMEM39A-208ENST00000486159 GNG5P63218 68 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 PSG3Q16557 428 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 DEFB114Q30KQ6 69 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms