RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 Q6ZQT7 251 aa12.88□□□□□ -0.35
CHRD-216ENST00000486066 IQCF2Q8IXL9 164 aa12.88□□□□□ -0.35
CHRD-216ENST00000486066 GOSR2O14653 212 aa12.87□□□□□ -0.35
CHRD-216ENST00000486066 OR4E1P0C645 316 aa12.87□□□□□ -0.35
CHRD-216ENST00000486066 ERCC8Q13216 396 aa12.87□□□□□ -0.35
CHRD-216ENST00000486066 PRR9Q5T870 116 aa12.87□□□□□ -0.35
CHRD-216ENST00000486066 ZFAND2AQ8N6M9 145 aa12.87□□□□□ -0.35
CHRD-216ENST00000486066 Q8N814 137 aa12.87□□□□□ -0.35
CHRD-216ENST00000486066 AGPAT4-IT1Q9H0P7 198 aa12.87□□□□□ -0.35
CHRD-216ENST00000486066 TRAV5A0A0B4J249 113 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 COX7A2P2O60397 106 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 MPDU1O75352 247 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 CRYGDP07320 174 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 NMBP08949 121 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 TNFSF8P32971 234 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 FAUP35544 74 aaKnown RBP12.86□□□□□ -0.35
CHRD-216ENST00000486066 KRTAP10-4P60372 401 aaPredicted RBP12.86□□□□□ -0.35
CHRD-216ENST00000486066 C10orf113Q5VZT2 155 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 C10orf126Q8N4M7 172 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 OR10P1Q8NGE3 313 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 GGACTQ9BVM4 153 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 SLIRPQ9GZT3 109 aaKnown RBP12.86□□□□□ -0.35
CHRD-216ENST00000486066 MGAT4CQ9UBM8 478 aa12.86□□□□□ -0.35
CHRD-216ENST00000486066 TSC22D2O75157 780 aa12.85□□□□□ -0.35
CHRD-216ENST00000486066 NDUFB4O95168 129 aa12.85□□□□□ -0.35
CHRD-216ENST00000486066 TAS2R30P59541 319 aa12.85□□□□□ -0.35
CHRD-216ENST00000486066 UBE2MP61081 183 aaKnown RBP12.85□□□□□ -0.35
CHRD-216ENST00000486066 LINC00477Q96M19 166 aa12.85□□□□□ -0.35
CHRD-216ENST00000486066 RCL1Q9Y2P8 373 aaKnown RBP12.85□□□□□ -0.35
CHRD-216ENST00000486066 RNF213Q63HN8 5207 aa12.84□□□□□ -0.35
CHRD-216ENST00000486066 TRBV19A0A075B6N1 114 aa12.84□□□□□ -0.35
CHRD-216ENST00000486066 C9orf170A2RU37 121 aa12.84□□□□□ -0.35
CHRD-216ENST00000486066 FABP12A6NFH5 140 aa12.84□□□□□ -0.35
CHRD-216ENST00000486066 PLA2G1BP04054 148 aaKnown RBP12.84□□□□□ -0.35
CHRD-216ENST00000486066 C9orf47Q6ZRZ4 202 aa12.84□□□□□ -0.35
CHRD-216ENST00000486066 DEFB104AQ8WTQ1 72 aa12.84□□□□□ -0.35
CHRD-216ENST00000486066 DEDD2Q8WXF8 326 aa12.84□□□□□ -0.35
CHRD-216ENST00000486066 DNAJC4Q9NNZ3 241 aa12.84□□□□□ -0.35
CHRD-216ENST00000486066 IGHV1OR15-1A0A075B7D0 117 aa12.83□□□□□ -0.36
CHRD-216ENST00000486066 SRIP30626 198 aa12.83□□□□□ -0.36
CHRD-216ENST00000486066 RNASE4P34096 147 aaKnown RBP12.83□□□□□ -0.36
CHRD-216ENST00000486066 ZNF415Q09FC8 603 aa12.83□□□□□ -0.36
CHRD-216ENST00000486066 ZNF479Q96JC4 524 aa12.83□□□□□ -0.36
CHRD-216ENST00000486066 E5RGE8 158 aa12.82□□□□□ -0.36
CHRD-216ENST00000486066 TIRAPP58753 221 aa12.82□□□□□ -0.36
CHRD-216ENST00000486066 LINC00528Q8N1L1 170 aa12.82□□□□□ -0.36
CHRD-216ENST00000486066 TOMM5Q8N4H5 51 aa12.82□□□□□ -0.36
CHRD-216ENST00000486066 OR10G4Q8NGN3 311 aa12.82□□□□□ -0.36
CHRD-216ENST00000486066 IBA57-AS1B1ANH7 110 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 SFTA3P0C7M3 94 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 GYPEP15421 78 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 AP3S2P59780 193 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 LINC01556Q5JQF7 62 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 MCFD2Q8NI22 146 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 RASL10AQ92737 203 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 TMEM14CQ9P0S9 112 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 PRELID1Q9Y255 219 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 V9GYH0 126 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 LRP2P98164 4655 aa12.81□□□□□ -0.36
CHRD-216ENST00000486066 C7orf66A4D0T2 115 aa12.8□□□□□ -0.36
CHRD-216ENST00000486066 ORM1P02763 201 aa12.8□□□□□ -0.36
CHRD-216ENST00000486066 GPX1P07203 203 aa12.8□□□□□ -0.36
CHRD-216ENST00000486066 PDE6HQ13956 83 aa12.8□□□□□ -0.36
CHRD-216ENST00000486066 MIC13Q5XKP0 118 aa12.8□□□□□ -0.36
CHRD-216ENST00000486066 TNXBP22105 4242 aa12.8□□□□□ -0.36
CHRD-216ENST00000486066 RGS13O14921 159 aa12.79□□□□□ -0.36
CHRD-216ENST00000486066 CAMLGP49069 296 aa12.79□□□□□ -0.36
CHRD-216ENST00000486066 SYT8Q8NBV8 401 aa12.79□□□□□ -0.36
CHRD-216ENST00000486066 RAB2BQ8WUD1 216 aa12.79□□□□□ -0.36
CHRD-216ENST00000486066 ZNF492Q9P255 531 aa12.79□□□□□ -0.36
CHRD-216ENST00000486066 TRGV4A0A0C4DH28 118 aa12.78□□□□□ -0.36
CHRD-216ENST00000486066 IGHV3-38A0A0C4DH36 116 aa12.78□□□□□ -0.36
CHRD-216ENST00000486066 WFDC2Q14508 124 aa12.78□□□□□ -0.36
CHRD-216ENST00000486066 NRARPQ7Z6K4 114 aa12.78□□□□□ -0.36
CHRD-216ENST00000486066 IGKV2-40A0A087WW87 121 aaPredicted RBP12.77□□□□□ -0.37
CHRD-216ENST00000486066 TRBV7-9A0A0J9YWB2 115 aa12.77□□□□□ -0.37
CHRD-216ENST00000486066 PSCAO43653 123 aa12.77□□□□□ -0.37
CHRD-216ENST00000486066 IGKV2D-40P01614 121 aaPredicted RBP12.77□□□□□ -0.37
CHRD-216ENST00000486066 HIST1H1EP10412 219 aaKnown RBP12.77□□□□□ -0.37
CHRD-216ENST00000486066 VWC2Q2TAL6 325 aa12.77□□□□□ -0.37
CHRD-216ENST00000486066 Q6ZRG5 221 aa12.77□□□□□ -0.37
CHRD-216ENST00000486066 EXOC3-AS1Q8N2X6 119 aa12.77□□□□□ -0.37
CHRD-216ENST00000486066 OR1L4Q8NGR5 311 aa12.77□□□□□ -0.37
CHRD-216ENST00000486066 BCL7BQ9BQE9 202 aa12.77□□□□□ -0.37
CHRD-216ENST00000486066 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.37
CHRD-216ENST00000486066 C11orf1Q9H5F2 150 aa12.77□□□□□ -0.37
CHRD-216ENST00000486066 WDR83OSQ9Y284 106 aa12.77□□□□□ -0.37
CHRD-216ENST00000486066 MBPP02686 304 aaPredicted RBP12.76□□□□□ -0.37
CHRD-216ENST00000486066 RPL29P47914 159 aaKnown RBP12.76□□□□□ -0.37
CHRD-216ENST00000486066 IAH1Q2TAA2 248 aaPredicted RBP12.76□□□□□ -0.37
CHRD-216ENST00000486066 CHAC2Q8WUX2 184 aa12.76□□□□□ -0.37
CHRD-216ENST00000486066 PFDN5Q99471 154 aa12.76□□□□□ -0.37
CHRD-216ENST00000486066 ARPC5LQ9BPX5 153 aa12.76□□□□□ -0.37
CHRD-216ENST00000486066 LOC100131303A0A0U1RQF7 123 aa12.75□□□□□ -0.37
CHRD-216ENST00000486066 C9JCJ5 164 aa12.75□□□□□ -0.37
CHRD-216ENST00000486066 OXTP01178 125 aa12.75□□□□□ -0.37
CHRD-216ENST00000486066 PYYP10082 97 aa12.75□□□□□ -0.37
CHRD-216ENST00000486066 TMBIM6P55061 237 aa12.75□□□□□ -0.37
CHRD-216ENST00000486066 PCNPQ8WW12 178 aaKnown RBP12.75□□□□□ -0.37
CHRD-216ENST00000486066 MRPS26Q9BYN8 205 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms