RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 RCL1Q9Y2P8 373 aaKnown RBP10.8□□□□□ -0.68
DDX56-210ENST00000479440 H3BQ15 152 aa10.79□□□□□ -0.68
DDX56-210ENST00000479440 AGPAT2O15120 278 aa10.79□□□□□ -0.68
DDX56-210ENST00000479440 CCNKO75909 580 aa10.79□□□□□ -0.68
DDX56-210ENST00000479440 AP3S2P59780 193 aa10.79□□□□□ -0.68
DDX56-210ENST00000479440 CD300CQ08708 224 aa10.79□□□□□ -0.68
DDX56-210ENST00000479440 ZNF415Q09FC8 603 aa10.79□□□□□ -0.68
DDX56-210ENST00000479440 PPP1R1AQ13522 171 aa10.79□□□□□ -0.68
DDX56-210ENST00000479440 MORN5Q5VZ52 161 aa10.79□□□□□ -0.68
DDX56-210ENST00000479440 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
DDX56-210ENST00000479440 SMIM8Q96KF7 97 aa10.79□□□□□ -0.68
DDX56-210ENST00000479440 SLC25A21Q9BQT8 299 aaPredicted RBP10.79□□□□□ -0.68
DDX56-210ENST00000479440 GYPEP15421 78 aa10.78□□□□□ -0.68
DDX56-210ENST00000479440 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
DDX56-210ENST00000479440 ERCC8Q13216 396 aa10.78□□□□□ -0.68
DDX56-210ENST00000479440 TMEM37Q8WXS4 190 aa10.78□□□□□ -0.68
DDX56-210ENST00000479440 FAM19A4Q96LR4 140 aa10.78□□□□□ -0.68
DDX56-210ENST00000479440 LINC00477Q96M19 166 aa10.78□□□□□ -0.68
DDX56-210ENST00000479440 DNAH8Q96JB1 4490 aa10.78□□□□□ -0.68
DDX56-210ENST00000479440 IGHV1OR15-1A0A075B7D0 117 aa10.77□□□□□ -0.69
DDX56-210ENST00000479440 C9JCJ5 164 aa10.77□□□□□ -0.69
DDX56-210ENST00000479440 GPX1P07203 203 aa10.77□□□□□ -0.69
DDX56-210ENST00000479440 CRISP2P16562 243 aa10.77□□□□□ -0.69
DDX56-210ENST00000479440 Q6ZSA8 131 aa10.77□□□□□ -0.69
DDX56-210ENST00000479440 IQCF2Q8IXL9 164 aa10.77□□□□□ -0.69
DDX56-210ENST00000479440 MCFD2Q8NI22 146 aa10.77□□□□□ -0.69
DDX56-210ENST00000479440 GGACTQ9BVM4 153 aa10.77□□□□□ -0.69
DDX56-210ENST00000479440 PRELID1Q9Y255 219 aa10.77□□□□□ -0.69
DDX56-210ENST00000479440 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
DDX56-210ENST00000479440 TSC22D2O75157 780 aa10.76□□□□□ -0.69
DDX56-210ENST00000479440 NMBP08949 121 aa10.76□□□□□ -0.69
DDX56-210ENST00000479440 Q6ZRG5 221 aa10.76□□□□□ -0.69
DDX56-210ENST00000479440 OR1L4Q8NGR5 311 aa10.76□□□□□ -0.69
DDX56-210ENST00000479440 TP53TG3Q9ULZ0 132 aa10.76□□□□□ -0.69
DDX56-210ENST00000479440 BOLA1Q9Y3E2 137 aa10.76□□□□□ -0.69
DDX56-210ENST00000479440 M0R3E3 92 aa10.75□□□□□ -0.69
DDX56-210ENST00000479440 OXTP01178 125 aa10.75□□□□□ -0.69
DDX56-210ENST00000479440 LINC01556Q5JQF7 62 aa10.75□□□□□ -0.69
DDX56-210ENST00000479440 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
DDX56-210ENST00000479440 TOMM5Q8N4H5 51 aa10.75□□□□□ -0.69
DDX56-210ENST00000479440 OR10G4Q8NGN3 311 aa10.75□□□□□ -0.69
DDX56-210ENST00000479440 PFDN5Q99471 154 aa10.75□□□□□ -0.69
DDX56-210ENST00000479440 MGST2Q99735 147 aa10.75□□□□□ -0.69
DDX56-210ENST00000479440 SRRQ9GZT4 340 aa10.75□□□□□ -0.69
DDX56-210ENST00000479440 Q9HAA7 133 aa10.75□□□□□ -0.69
DDX56-210ENST00000479440 TRBV19A0A075B6N1 114 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 IBA57-AS1B1ANH7 110 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 SCGB1D2O95969 90 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 SFTA3P0C7M3 94 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 PPT1P50897 306 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 TAS2R30P59541 319 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 UBE2MP61081 183 aaKnown RBP10.74□□□□□ -0.69
DDX56-210ENST00000479440 RAB31Q13636 194 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 SPCS2Q15005 226 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 TMEM78Q5T7P6 136 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 SLC25A31Q9H0C2 315 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 AGPAT4-IT1Q9H0P7 198 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 DNAJC4Q9NNZ3 241 aa10.74□□□□□ -0.69
DDX56-210ENST00000479440 FABP12A6NFH5 140 aa10.73□□□□□ -0.69
DDX56-210ENST00000479440 HIST1H1EP10412 219 aaKnown RBP10.73□□□□□ -0.69
DDX56-210ENST00000479440 CAMLGP49069 296 aa10.73□□□□□ -0.69
DDX56-210ENST00000479440 TIRAPP58753 221 aa10.73□□□□□ -0.69
DDX56-210ENST00000479440 PDE6HQ13956 83 aa10.73□□□□□ -0.69
DDX56-210ENST00000479440 C12orf45Q8N5I9 185 aaPredicted RBP10.73□□□□□ -0.69
DDX56-210ENST00000479440 ZFAND2AQ8N6M9 145 aa10.73□□□□□ -0.69
DDX56-210ENST00000479440 DEDD2Q8WXF8 326 aa10.73□□□□□ -0.69
DDX56-210ENST00000479440 TRIM63Q969Q1 353 aa10.73□□□□□ -0.69
DDX56-210ENST00000479440 ZNF479Q96JC4 524 aa10.73□□□□□ -0.69
DDX56-210ENST00000479440 AAMDCQ9H7C9 122 aa10.73□□□□□ -0.69
DDX56-210ENST00000479440 PRR9Q5T870 116 aa10.72□□□□□ -0.69
DDX56-210ENST00000479440 C9orf47Q6ZRZ4 202 aa10.72□□□□□ -0.69
DDX56-210ENST00000479440 RAB2BQ8WUD1 216 aa10.72□□□□□ -0.69
DDX56-210ENST00000479440 BLNKQ8WV28 456 aa10.72□□□□□ -0.69
DDX56-210ENST00000479440 TIMM9Q9Y5J7 89 aa10.72□□□□□ -0.69
DDX56-210ENST00000479440 TRAV8-6A0A0B4J262 113 aa10.71□□□□□ -0.69
DDX56-210ENST00000479440 NRARPQ7Z6K4 114 aa10.71□□□□□ -0.69
DDX56-210ENST00000479440 NHLRC2Q8NBF2 726 aa10.71□□□□□ -0.69
DDX56-210ENST00000479440 IGKV2-40A0A087WW87 121 aaPredicted RBP10.7□□□□□ -0.7
DDX56-210ENST00000479440 TRAV4A0A0B4J268 109 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 C9orf170A2RU37 121 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 IGKV2D-40P01614 121 aaPredicted RBP10.7□□□□□ -0.7
DDX56-210ENST00000479440 SMIM18P0DKX4 95 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 ARL16Q0P5N6 197 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 LAGE3Q14657 143 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 TDRG1Q3Y452 100 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 MIC13Q5XKP0 118 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 RASL10AQ92737 203 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 SOSTQ9BQB4 213 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 TM2D2Q9BX73 214 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 TMEM14CQ9P0S9 112 aa10.7□□□□□ -0.7
DDX56-210ENST00000479440 NDUFB4O95168 129 aa10.69□□□□□ -0.7
DDX56-210ENST00000479440 ZNF846Q147U1 533 aa10.69□□□□□ -0.7
DDX56-210ENST00000479440 IAH1Q2TAA2 248 aaPredicted RBP10.69□□□□□ -0.7
DDX56-210ENST00000479440 DYNC2LI1Q8TCX1 351 aa10.69□□□□□ -0.7
DDX56-210ENST00000479440 SPXQ9BT56 116 aa10.69□□□□□ -0.7
DDX56-210ENST00000479440 ZNF492Q9P255 531 aa10.69□□□□□ -0.7
DDX56-210ENST00000479440 TRGV11A0A075B6L2 103 aa10.68□□□□□ -0.7
DDX56-210ENST00000479440 TRBV7-9A0A0J9YWB2 115 aa10.68□□□□□ -0.7
DDX56-210ENST00000479440 TNFSF8P32971 234 aa10.68□□□□□ -0.7
DDX56-210ENST00000479440 ASAH1Q13510 395 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms