RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 HIST1H1AQ02539 215 aaPredicted RBP10.6□□□□□ -0.71
USP11-207ENST00000478596 STHQ8IWL8 128 aa10.6□□□□□ -0.71
USP11-207ENST00000478596 LYPD1Q8N2G4 141 aa10.6□□□□□ -0.71
USP11-207ENST00000478596 MAPKAPK5-AS1Q8N8E1 139 aa10.6□□□□□ -0.71
USP11-207ENST00000478596 OR10J6PQ8NGY7 276 aa10.6□□□□□ -0.71
USP11-207ENST00000478596 RNF183Q96D59 192 aa10.6□□□□□ -0.71
USP11-207ENST00000478596 C20orf173Q96LM9 149 aa10.6□□□□□ -0.71
USP11-207ENST00000478596 PPP1R14DQ9NXH3 145 aa10.6□□□□□ -0.71
USP11-207ENST00000478596 TRAV1-1A0A0B4J248 108 aa10.59□□□□□ -0.71
USP11-207ENST00000478596 PGPA6NDG6 321 aa10.59□□□□□ -0.71
USP11-207ENST00000478596 KNCNA6PVL3 124 aa10.59□□□□□ -0.71
USP11-207ENST00000478596 M0R3E3 92 aa10.59□□□□□ -0.71
USP11-207ENST00000478596 PAGE4O60829 102 aa10.59□□□□□ -0.71
USP11-207ENST00000478596 ZNF124Q15973 351 aa10.59□□□□□ -0.71
USP11-207ENST00000478596 ZNF575Q86XF7 245 aa10.59□□□□□ -0.71
USP11-207ENST00000478596 LOC102724200A0A096LPH7 203 aaPredicted RBP10.58□□□□□ -0.72
USP11-207ENST00000478596 ZNF705FA8MVS1 300 aaPredicted RBP10.58□□□□□ -0.72
USP11-207ENST00000478596 K7EQM0 130 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 RTL8CO15255 209 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 SPRY2O43597 315 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 CDK2AP2O75956 126 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 IGKV3-20P01619 116 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 FOXI2Q6ZQN5 318 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 Q6ZWC4 215 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 C5orf17Q8NAS9 161 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 OR4B1Q8NGF8 309 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 RXFP4Q8TDU9 374 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 MRPL53Q96EL3 112 aaKnown RBP10.58□□□□□ -0.72
USP11-207ENST00000478596 YTHDF2Q9Y5A9 579 aaKnown RBP10.58□□□□□ -0.72
USP11-207ENST00000478596 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
USP11-207ENST00000478596 AGRNO00468 2067 aa10.57□□□□□ -0.72
USP11-207ENST00000478596 IGKV2-40A0A087WW87 121 aaPredicted RBP10.57□□□□□ -0.72
USP11-207ENST00000478596 A0A1W2PRE2 83 aa10.57□□□□□ -0.72
USP11-207ENST00000478596 FAM74A7A6NL05 159 aa10.57□□□□□ -0.72
USP11-207ENST00000478596 GGTLC3B5MD39 225 aa10.57□□□□□ -0.72
USP11-207ENST00000478596 C11orf94C9JXX5 98 aa10.57□□□□□ -0.72
USP11-207ENST00000478596 F6UB75 175 aa10.57□□□□□ -0.72
USP11-207ENST00000478596 IGKV2D-40P01614 121 aaPredicted RBP10.57□□□□□ -0.72
USP11-207ENST00000478596 RPL35AP18077 110 aaKnown RBP10.57□□□□□ -0.72
USP11-207ENST00000478596 DEFB1P60022 68 aa10.57□□□□□ -0.72
USP11-207ENST00000478596 SUMO1P63165 101 aaKnown RBP10.57□□□□□ -0.72
USP11-207ENST00000478596 GNG5P63218 68 aa10.57□□□□□ -0.72
USP11-207ENST00000478596 NKX6-2Q9C056 277 aaPredicted RBP10.57□□□□□ -0.72
USP11-207ENST00000478596 F6UZH7 168 aa10.56□□□□□ -0.72
USP11-207ENST00000478596 DUSP14O95147 198 aaKnown RBP10.56□□□□□ -0.72
USP11-207ENST00000478596 ZNF705DP0CH99 300 aaPredicted RBP10.56□□□□□ -0.72
USP11-207ENST00000478596 ZNF705BP0CI00 300 aaPredicted RBP10.56□□□□□ -0.72
USP11-207ENST00000478596 BCL2P10415 239 aa10.56□□□□□ -0.72
USP11-207ENST00000478596 ATP5G3P48201 142 aa10.56□□□□□ -0.72
USP11-207ENST00000478596 CCL20P78556 96 aa10.56□□□□□ -0.72
USP11-207ENST00000478596 TOR2AQ5JU69 321 aa10.56□□□□□ -0.72
USP11-207ENST00000478596 TMEM78Q5T7P6 136 aa10.56□□□□□ -0.72
USP11-207ENST00000478596 GOLT1AQ6ZVE7 132 aa10.56□□□□□ -0.72
USP11-207ENST00000478596 SUN5Q8TC36 379 aa10.56□□□□□ -0.72
USP11-207ENST00000478596 SAV1Q9H4B6 383 aaPredicted RBP10.56□□□□□ -0.72
USP11-207ENST00000478596 APOBP04114 4563 aaKnown RBP10.55□□□□□ -0.72
USP11-207ENST00000478596 NMBP08949 121 aa10.55□□□□□ -0.72
USP11-207ENST00000478596 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
USP11-207ENST00000478596 TAGLN2P37802 199 aaKnown RBP10.55□□□□□ -0.72
USP11-207ENST00000478596 AKR1C3P42330 323 aa10.55□□□□□ -0.72
USP11-207ENST00000478596 Q8N1X5 172 aa10.55□□□□□ -0.72
USP11-207ENST00000478596 OR8A1Q8NGG7 326 aa10.55□□□□□ -0.72
USP11-207ENST00000478596 C2CD4CQ8TF44 421 aa10.55□□□□□ -0.72
USP11-207ENST00000478596 EIF5A2Q9GZV4 153 aaKnown RBP10.55□□□□□ -0.72
USP11-207ENST00000478596 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
USP11-207ENST00000478596 A0A0J9YX75 114 aa10.54□□□□□ -0.72
USP11-207ENST00000478596 PRAC2D3DTV9 90 aa10.54□□□□□ -0.72
USP11-207ENST00000478596 PEX7O00628 323 aa10.54□□□□□ -0.72
USP11-207ENST00000478596 CNN1P51911 297 aaKnown RBP10.54□□□□□ -0.72
USP11-207ENST00000478596 IFITM2Q01629 132 aa10.54□□□□□ -0.72
USP11-207ENST00000478596 MEF2BQ02080 365 aaPredicted RBP10.54□□□□□ -0.72
USP11-207ENST00000478596 GDF5OSQ5U4N7 250 aa10.54□□□□□ -0.72
USP11-207ENST00000478596 CYB561D1Q8N8Q1 229 aa10.54□□□□□ -0.72
USP11-207ENST00000478596 ATG101Q9BSB4 218 aa10.54□□□□□ -0.72
USP11-207ENST00000478596 LRP1BQ9NZR2 4599 aa10.54□□□□□ -0.72
USP11-207ENST00000478596 VAX2Q9UIW0 290 aa10.54□□□□□ -0.72
USP11-207ENST00000478596 APLNQ9ULZ1 77 aa10.54□□□□□ -0.72
USP11-207ENST00000478596 SERTM2A0A1B0GWG4 89 aa10.53□□□□□ -0.72
USP11-207ENST00000478596 DIRC3C9JPN6 131 aa10.53□□□□□ -0.72
USP11-207ENST00000478596 CEBPGP53567 150 aa10.53□□□□□ -0.72
USP11-207ENST00000478596 APOC4P55056 127 aa10.53□□□□□ -0.72
USP11-207ENST00000478596 NUTF2P61970 127 aaKnown RBP10.53□□□□□ -0.72
USP11-207ENST00000478596 UBE2G1P62253 170 aa10.53□□□□□ -0.72
USP11-207ENST00000478596 TCEAL7Q9BRU2 100 aa10.53□□□□□ -0.72
USP11-207ENST00000478596 NDFIP1Q9BT67 221 aa10.53□□□□□ -0.72
USP11-207ENST00000478596 LOC102723971A0A1B0GUV8 181 aa10.52□□□□□ -0.73
USP11-207ENST00000478596 SCO2A0A1W2PP80 73 aa10.52□□□□□ -0.73
USP11-207ENST00000478596 RBFOX3A6NFN3 312 aa10.52□□□□□ -0.73
USP11-207ENST00000478596 TCRAP04437 139 aa10.52□□□□□ -0.73
USP11-207ENST00000478596 ERCC8Q13216 396 aa10.52□□□□□ -0.73
USP11-207ENST00000478596 DEFB135Q30KP9 77 aa10.52□□□□□ -0.73
USP11-207ENST00000478596 HIST1H2BAQ96A08 127 aa10.52□□□□□ -0.73
USP11-207ENST00000478596 TXNDC17Q9BRA2 123 aa10.52□□□□□ -0.73
USP11-207ENST00000478596 EPDR1Q9UM22 224 aa10.52□□□□□ -0.73
USP11-207ENST00000478596 NPIPB6E9PJ23 425 aa10.51□□□□□ -0.73
USP11-207ENST00000478596 H3BMM0 161 aa10.51□□□□□ -0.73
USP11-207ENST00000478596 J3KRW8 73 aa10.51□□□□□ -0.73
USP11-207ENST00000478596 UBE2CO00762 179 aa10.51□□□□□ -0.73
USP11-207ENST00000478596 PDE6DO43924 150 aa10.51□□□□□ -0.73
USP11-207ENST00000478596 CA1P00915 261 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms