RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 RBMY1FQ15415 496 aaKnown RBP12.79□□□□□ -0.36
PTPN7-209ENST00000477554 Q8NAQ8 132 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 OTORQ9NRC9 128 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 MED9Q9NWA0 146 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 XCL2Q9UBD3 114 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 PRELID1Q9Y255 219 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 LCE6AA0A183 80 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 PGPA6NDG6 321 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 ZNF705DP0CH99 300 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-209ENST00000477554 ZNF705BP0CI00 300 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-209ENST00000477554 HLA-DRB4P13762 266 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 NANOS2P60321 138 aaKnown RBP12.79□□□□□ -0.36
PTPN7-209ENST00000477554 EIF5A2Q9GZV4 153 aaKnown RBP12.79□□□□□ -0.36
PTPN7-209ENST00000477554 SAV1Q9H4B6 383 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-209ENST00000477554 VAX2Q9UIW0 290 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 YTHDF2Q9Y5A9 579 aaKnown RBP12.79□□□□□ -0.36
PTPN7-209ENST00000477554 HLA-DRB4X5D2U9 266 aa12.79□□□□□ -0.36
PTPN7-209ENST00000477554 C11orf94C9JXX5 98 aa12.78□□□□□ -0.36
PTPN7-209ENST00000477554 SUMO1P63165 101 aaKnown RBP12.78□□□□□ -0.36
PTPN7-209ENST00000477554 ICAM4Q14773 271 aa12.78□□□□□ -0.36
PTPN7-209ENST00000477554 EXOC3-AS1Q8N2X6 119 aa12.78□□□□□ -0.36
PTPN7-209ENST00000477554 SLC35B3Q9H1N7 401 aa12.78□□□□□ -0.36
PTPN7-209ENST00000477554 IGHV4-28A0A0C4DH34 117 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 LOC102723971A0A1B0GUV8 181 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 RAB19A4D1S5 217 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 LINC00862A6NCI5 91 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 CXorf65A6NEN9 183 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 MEF2BQ02080 365 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-209ENST00000477554 TOR2AQ5JU69 321 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 ZNF506Q5JVG8 444 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 ARL6IP6Q8N6S5 226 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 CMTM2Q8TAZ6 248 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 RXFP4Q8TDU9 374 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 MRPL53Q96EL3 112 aaKnown RBP12.77□□□□□ -0.37
PTPN7-209ENST00000477554 TCEAL7Q9BRU2 100 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 SMDT1Q9H4I9 107 aa12.77□□□□□ -0.37
PTPN7-209ENST00000477554 GGTLC3B5MD39 225 aa12.76□□□□□ -0.37
PTPN7-209ENST00000477554 SLC25A5P05141 298 aaKnown RBP12.76□□□□□ -0.37
PTPN7-209ENST00000477554 CSN1S1P47710 185 aa12.76□□□□□ -0.37
PTPN7-209ENST00000477554 PEA15Q15121 130 aa12.76□□□□□ -0.37
PTPN7-209ENST00000477554 PSG3Q16557 428 aa12.76□□□□□ -0.37
PTPN7-209ENST00000477554 MORN3Q6PF18 240 aaPredicted RBP12.76□□□□□ -0.37
PTPN7-209ENST00000477554 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
PTPN7-209ENST00000477554 KMT2AQ03164 3969 aa12.76□□□□□ -0.37
PTPN7-209ENST00000477554 A0A0J9YX75 114 aa12.75□□□□□ -0.37
PTPN7-209ENST00000477554 PDE6DO43924 150 aa12.75□□□□□ -0.37
PTPN7-209ENST00000477554 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
PTPN7-209ENST00000477554 ATP5G3P48201 142 aa12.75□□□□□ -0.37
PTPN7-209ENST00000477554 FOXI2Q6ZQN5 318 aa12.75□□□□□ -0.37
PTPN7-209ENST00000477554 CCDC28AQ8IWP9 274 aa12.75□□□□□ -0.37
PTPN7-209ENST00000477554 OR4B1Q8NGF8 309 aa12.75□□□□□ -0.37
PTPN7-209ENST00000477554 F6UZH7 168 aa12.74□□□□□ -0.37
PTPN7-209ENST00000477554 C11orf68Q9H3H3 251 aaKnown RBP12.74□□□□□ -0.37
PTPN7-209ENST00000477554 EPDR1Q9UM22 224 aa12.74□□□□□ -0.37
PTPN7-209ENST00000477554 CELA1Q9UNI1 258 aa12.74□□□□□ -0.37
PTPN7-209ENST00000477554 VPS13DQ5THJ4 4388 aa12.73□□□□□ -0.37
PTPN7-209ENST00000477554 PRM2P04554 102 aa12.73□□□□□ -0.37
PTPN7-209ENST00000477554 AMTNQ6UX39 209 aa12.73□□□□□ -0.37
PTPN7-209ENST00000477554 COMMD7Q86VX2 200 aa12.73□□□□□ -0.37
PTPN7-209ENST00000477554 ZNF738Q8NE65 137 aa12.73□□□□□ -0.37
PTPN7-209ENST00000477554 HIST1H2BAQ96A08 127 aa12.73□□□□□ -0.37
PTPN7-209ENST00000477554 SERTM2A0A1B0GWG4 89 aa12.72□□□□□ -0.37
PTPN7-209ENST00000477554 M0R3E3 92 aa12.72□□□□□ -0.37
PTPN7-209ENST00000477554 NDUFA5Q16718 116 aa12.72□□□□□ -0.37
PTPN7-209ENST00000477554 EPPK1P58107 5090 aaKnown RBP12.72□□□□□ -0.37
PTPN7-209ENST00000477554 K7EQM0 130 aa12.71□□□□□ -0.37
PTPN7-209ENST00000477554 CEMP1Q6PRD7 247 aaPredicted RBP12.71□□□□□ -0.37
PTPN7-209ENST00000477554 UQCC3Q6UW78 93 aa12.71□□□□□ -0.37
PTPN7-209ENST00000477554 EIF4E3Q8N5X7 224 aaKnown RBP12.71□□□□□ -0.37
PTPN7-209ENST00000477554 PHLDA1Q8WV24 401 aaPredicted RBP12.71□□□□□ -0.37
PTPN7-209ENST00000477554 RPUSD4Q96CM3 377 aaKnown RBP12.71□□□□□ -0.37
PTPN7-209ENST00000477554 ATG101Q9BSB4 218 aa12.71□□□□□ -0.37
PTPN7-209ENST00000477554 IGHV3OR16-12A0A075B7B8 117 aa12.71□□□□□ -0.38
PTPN7-209ENST00000477554 ZNF705FA8MVS1 300 aaPredicted RBP12.71□□□□□ -0.38
PTPN7-209ENST00000477554 DIRC3C9JPN6 131 aa12.71□□□□□ -0.38
PTPN7-209ENST00000477554 TMEM250H0YL14 139 aa12.71□□□□□ -0.38
PTPN7-209ENST00000477554 TCRAP04437 139 aa12.71□□□□□ -0.38
PTPN7-209ENST00000477554 C1orf158Q8N1D5 194 aa12.71□□□□□ -0.38
PTPN7-209ENST00000477554 CYB561D1Q8N8Q1 229 aa12.71□□□□□ -0.38
PTPN7-209ENST00000477554 C11orf45Q8TAV5 145 aa12.71□□□□□ -0.38
PTPN7-209ENST00000477554 TREM1Q9NP99 234 aa12.71□□□□□ -0.38
PTPN7-209ENST00000477554 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.38
PTPN7-209ENST00000477554 A8MTW9 85 aa12.7□□□□□ -0.38
PTPN7-209ENST00000477554 PRAC2D3DTV9 90 aa12.7□□□□□ -0.38
PTPN7-209ENST00000477554 PEX7O00628 323 aa12.7□□□□□ -0.38
PTPN7-209ENST00000477554 CNN1P51911 297 aaKnown RBP12.7□□□□□ -0.38
PTPN7-209ENST00000477554 GNG5P63218 68 aa12.7□□□□□ -0.38
PTPN7-209ENST00000477554 ZNF705AQ6ZN79 300 aaPredicted RBP12.7□□□□□ -0.38
PTPN7-209ENST00000477554 C11orf52Q96A22 123 aa12.7□□□□□ -0.38
PTPN7-209ENST00000477554 SCO2A0A1W2PP80 73 aa12.69□□□□□ -0.38
PTPN7-209ENST00000477554 RBAKDNA6NC62 111 aa12.69□□□□□ -0.38
PTPN7-209ENST00000477554 M0R2Z0 102 aa12.69□□□□□ -0.38
PTPN7-209ENST00000477554 SRSF3P84103 164 aaKnown RBP12.69□□□□□ -0.38
PTPN7-209ENST00000477554 EBLN2Q6P2I7 272 aa12.69□□□□□ -0.38
PTPN7-209ENST00000477554 GOLT1AQ6ZVE7 132 aa12.69□□□□□ -0.38
PTPN7-209ENST00000477554 OR10J6PQ8NGY7 276 aa12.69□□□□□ -0.38
PTPN7-209ENST00000477554 FBLL1A6NHQ2 334 aaKnown RBP12.68□□□□□ -0.38
PTPN7-209ENST00000477554 CRXO43186 299 aaPredicted RBP12.68□□□□□ -0.38
PTPN7-209ENST00000477554 S100A9P06702 114 aaKnown RBP12.68□□□□□ -0.38
PTPN7-209ENST00000477554 SRP19P09132 144 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms