RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	OR10D4P	Q8NGN7	298 aa		4.4	□□□□□ -1.71
LRCH3-215	ENST00000476664	HIST1H2BH	Q93079	126 aa		4.4	□□□□□ -1.71
LRCH3-215	ENST00000476664	HIST1H2BN	Q99877	126 aa		4.4	□□□□□ -1.71
LRCH3-215	ENST00000476664	HIST1H2BM	Q99879	126 aa		4.4	□□□□□ -1.71
LRCH3-215	ENST00000476664	TMEM126A	Q9H061	195 aa		4.4	□□□□□ -1.71
LRCH3-215	ENST00000476664	RNF122	Q9H9V4	155 aa		4.4	□□□□□ -1.71
LRCH3-215	ENST00000476664	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.4	□□□□□ -1.71
LRCH3-215	ENST00000476664	ARHGAP32	A7KAX9	2087 aa		4.4	□□□□□ -1.71
LRCH3-215	ENST00000476664	HSPG2	P98160	4391 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	IGLV4-69	A0A075B6H9	119 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664		A0A087WUU8	490 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	TRAV38-1	A0A0B4J264	116 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	SLC25A20	O43772	301 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	RPL27A	P46776	148 aa	Known RBP	4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	GABRA2	P47869	451 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	TAS2R20	P59543	309 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	KRTAP10-11	P60412	298 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	CKS1B	P61024	79 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	CROCCP2	Q86T23	111 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	ZNF709	Q8N972	641 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	CLDND2	Q8NHS1	167 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	FNDC9	Q8TBE3	224 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	NUBP2	Q9Y5Y2	271 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664	ICOS	Q9Y6W8	199 aa		4.39	□□□□□ -1.71
LRCH3-215	ENST00000476664		J3KT08	172 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	PRM2	P04554	102 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	DBI	P07108	87 aa	Known RBP	4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	NPY1R	P25929	384 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	CRYBB3	P26998	211 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	BLVRB	P30043	206 aa	Predicted RBP	4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	CMPK1	P30085	196 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	CSN1S1	P47710	185 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	RPS11	P62280	158 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	LGALS9B	Q3B8N2	356 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	LGALS9C	Q6DKI2	356 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	AGTRAP	Q6RW13	159 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	H1FX	Q92522	213 aa	Known RBP	4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	ADAT3	Q96EY9	351 aa	Predicted RBP	4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	MND1	Q9BWT6	205 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	OR2J1	Q9GZK6	312 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	LAMTOR2	Q9Y2Q5	125 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	KIF25-AS1	Q9Y6Z4	181 aa		4.38	□□□□□ -1.71
LRCH3-215	ENST00000476664	DOCK11	Q5JSL3	2073 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664		A0A1B0GX51	115 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	DHRS12	A0PJE2	317 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664		H3BMM0	161 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	OGN	P20774	298 aa	Known RBP	4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	LYZL2	Q7Z4W2	148 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	BPIFB6	Q8NFQ5	453 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	OR8J3	Q8NGG0	315 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	RPS4Y2	Q8TD47	263 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	UBE2W	Q96B02	151 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	MGLL	Q99685	303 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	SNRNP25	Q9BV90	132 aa	Known RBP	4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	RTL8A	Q9BWD3	113 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	VCX	Q9H320	206 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	TPT1P8	Q9HAU6	139 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	XAGE1A	Q9HD64	81 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664	FUT9	Q9Y231	359 aa		4.37	□□□□□ -1.71
LRCH3-215	ENST00000476664		A0A087WX48	190 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	IGLV7-43	P04211	117 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	IL4	P05112	153 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	COX4I1	P13073	169 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	S100A1	P23297	94 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	ZNF616	Q08AN1	781 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	FUT5	Q11128	374 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	SLC25A34	Q6PIV7	304 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	RASL11A	Q6T310	242 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	PACRGL	Q8N7B6	248 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	OR5A1	Q8NGJ0	315 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	ISOC1	Q96CN7	298 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	FOPNL	Q96NB1	174 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	TM2D3	Q9BRN9	247 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	C11orf1	Q9H5F2	150 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	IL36B	Q9NZH7	164 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	COPZ2	Q9P299	210 aa		4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	SOX21	Q9Y651	276 aa	Predicted RBP	4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	DYNC1H1	Q14204	4646 aa	Known RBP	4.36	□□□□□ -1.71
LRCH3-215	ENST00000476664	GRIFIN	A4D1Z8	144 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	LYNX1	G3V0Z9	82 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	LECT2	O14960	151 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	LYNX1	P0DP58	116 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	MT3	P25713	68 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	POLR2H	P52434	150 aa	Known RBP	4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	RELA	Q04206	551 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	OR8B8	Q15620	311 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	CCSMST1	Q4G0I0	132 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	AADACL3	Q5VUY0	350 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664		Q6ZQT7	251 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	LCA10	Q71F78	164 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	ADM2	Q7Z4H4	148 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	SPATA12	Q7Z6I5	190 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	KTN1-AS1	Q86SY8	53 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	UBALD1	Q8TB05	177 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	TUBA4B	Q9H853	241 aa		4.35	□□□□□ -1.71
LRCH3-215	ENST00000476664	IGLV3-16	A0A075B6K0	115 aa		4.34	□□□□□ -1.71
LRCH3-215	ENST00000476664	TRAV36DV7	A0A075B6V5	113 aa		4.34	□□□□□ -1.71

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