RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 PI4KAP42356 2102 aa12.62□□□□□ -0.39
SMC4-204ENST00000462787 LYNX1G3V0Z9 82 aa12.61□□□□□ -0.39
SMC4-204ENST00000462787 LYNX1P0DP58 116 aa12.61□□□□□ -0.39
SMC4-204ENST00000462787 UCNP55089 124 aa12.61□□□□□ -0.39
SMC4-204ENST00000462787 TRAV41A0A0B4J266 112 aa12.61□□□□□ -0.39
SMC4-204ENST00000462787 C2orf70A6NJV1 201 aa12.61□□□□□ -0.39
SMC4-204ENST00000462787 CITED1Q99966 193 aa12.61□□□□□ -0.39
SMC4-204ENST00000462787 ODF3L1Q8IXM7 274 aa12.61□□□□□ -0.39
SMC4-204ENST00000462787 SS18L2Q9UHA2 77 aa12.61□□□□□ -0.39
SMC4-204ENST00000462787 MBD3L4A6NDZ8 208 aaPredicted RBP12.61□□□□□ -0.39
SMC4-204ENST00000462787 MBD3L3A6NE82 208 aaPredicted RBP12.61□□□□□ -0.39
SMC4-204ENST00000462787 MBD3L5A6NJ08 208 aaPredicted RBP12.61□□□□□ -0.39
SMC4-204ENST00000462787 MBD3L2Q8NHZ7 208 aaPredicted RBP12.61□□□□□ -0.39
SMC4-204ENST00000462787 C20orf78Q9BR46 151 aa12.61□□□□□ -0.39
SMC4-204ENST00000462787 FRMD6-AS1P0C7T7 363 aa12.6□□□□□ -0.39
SMC4-204ENST00000462787 HIST1H4AP62805 103 aaKnown RBP12.6□□□□□ -0.39
SMC4-204ENST00000462787 SPXQ9BT56 116 aa12.6□□□□□ -0.39
SMC4-204ENST00000462787 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.6□□□□□ -0.39
SMC4-204ENST00000462787 M0R1W7 72 aa12.6□□□□□ -0.39
SMC4-204ENST00000462787 DIDO1Q9BTC0 2240 aaKnown RBP12.6□□□□□ -0.39
SMC4-204ENST00000462787 UTF1Q5T230 341 aa12.6□□□□□ -0.39
SMC4-204ENST00000462787 GAGE2AQ6NT46 116 aa12.6□□□□□ -0.39
SMC4-204ENST00000462787 IL17RELQ6ZVW7 336 aa12.6□□□□□ -0.39
SMC4-204ENST00000462787 VMO1Q7Z5L0 202 aa12.59□□□□□ -0.39
SMC4-204ENST00000462787 K7EMI3 77 aa12.59□□□□□ -0.39
SMC4-204ENST00000462787 SRD5A1P18405 259 aa12.59□□□□□ -0.39
SMC4-204ENST00000462787 LYPD2Q6UXB3 125 aa12.59□□□□□ -0.39
SMC4-204ENST00000462787 TMEM86BQ8N661 226 aa12.59□□□□□ -0.39
SMC4-204ENST00000462787 KLRD1Q13241 179 aa12.59□□□□□ -0.39
SMC4-204ENST00000462787 WFDC2Q14508 124 aa12.59□□□□□ -0.39
SMC4-204ENST00000462787 WFDC12Q8WWY7 111 aa12.59□□□□□ -0.39
SMC4-204ENST00000462787 ALPK3Q96L96 1907 aa12.59□□□□□ -0.39
SMC4-204ENST00000462787 EFNA4P52798 201 aa12.59□□□□□ -0.39
SMC4-204ENST00000462787 TRPT1Q86TN4 253 aaKnown RBP12.59□□□□□ -0.39
SMC4-204ENST00000462787 C15orf53Q8NAA6 179 aa12.58□□□□□ -0.4
SMC4-204ENST00000462787 LEPROTO15243 131 aa12.58□□□□□ -0.4
SMC4-204ENST00000462787 CTRLP40313 264 aa12.58□□□□□ -0.4
SMC4-204ENST00000462787 FXYD2P54710 66 aa12.58□□□□□ -0.4
SMC4-204ENST00000462787 ZNF672Q499Z4 452 aaPredicted RBP12.58□□□□□ -0.4
SMC4-204ENST00000462787 C8orf86Q6ZUL3 223 aa12.58□□□□□ -0.4
SMC4-204ENST00000462787 C3orf36Q3SXR2 165 aa12.58□□□□□ -0.4
SMC4-204ENST00000462787 NTN5Q8WTR8 489 aaPredicted RBP12.57□□□□□ -0.4
SMC4-204ENST00000462787 LINC00158P58513 81 aa12.57□□□□□ -0.4
SMC4-204ENST00000462787 CFAP161Q6P656 301 aa12.57□□□□□ -0.4
SMC4-204ENST00000462787 FAM167A-AS1Q96KT0 104 aa12.57□□□□□ -0.4
SMC4-204ENST00000462787 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
SMC4-204ENST00000462787 IGLV2-14P01704 120 aa12.57□□□□□ -0.4
SMC4-204ENST00000462787 DEFB104AQ8WTQ1 72 aa12.57□□□□□ -0.4
SMC4-204ENST00000462787 SPTA1P02549 2419 aa12.57□□□□□ -0.4
SMC4-204ENST00000462787 NDPQ00604 133 aa12.57□□□□□ -0.4
SMC4-204ENST00000462787 SPATA12Q7Z6I5 190 aa12.57□□□□□ -0.4
SMC4-204ENST00000462787 TMEM105Q8N8V8 129 aa12.56□□□□□ -0.4
SMC4-204ENST00000462787 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
SMC4-204ENST00000462787 ITLN2Q8WWU7 325 aaPredicted RBP12.56□□□□□ -0.4
SMC4-204ENST00000462787 A0A087WWL8 130 aa12.56□□□□□ -0.4
SMC4-204ENST00000462787 ADARB2-AS1A8MUL3 147 aa12.56□□□□□ -0.4
SMC4-204ENST00000462787 J3QQQ9 107 aa12.56□□□□□ -0.4
SMC4-204ENST00000462787 TEX36Q5VZQ5 186 aa12.56□□□□□ -0.4
SMC4-204ENST00000462787 TEN1Q86WV5 123 aa12.56□□□□□ -0.4
SMC4-204ENST00000462787 THBDP07204 575 aa12.56□□□□□ -0.4
SMC4-204ENST00000462787 GP9P14770 177 aa12.55□□□□□ -0.4
SMC4-204ENST00000462787 GATD1Q8NB37 220 aa12.55□□□□□ -0.4
SMC4-204ENST00000462787 DENND4CQ5VZ89 1909 aa12.55□□□□□ -0.4
SMC4-204ENST00000462787 C11orf53Q8IXP5 236 aa12.55□□□□□ -0.4
SMC4-204ENST00000462787 DNAJC30Q96LL9 226 aa12.55□□□□□ -0.4
SMC4-204ENST00000462787 CFC1BP0CG36 223 aa12.55□□□□□ -0.4
SMC4-204ENST00000462787 CFC1P0CG37 223 aa12.55□□□□□ -0.4
SMC4-204ENST00000462787 TPSG1Q9NRR2 321 aa12.55□□□□□ -0.4
SMC4-204ENST00000462787 FAM223BA6NKX1 122 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 IGHG4P01861 327 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 CRYBA4P53673 196 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 FAM223AQ8IWN6 122 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 ATP6V0E2Q8NHE4 81 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 COL4A6Q14031 1691 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 FOXI1Q12951 378 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 PATE2Q6UY27 113 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 ZNF491Q8N8L2 437 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 FER1L5A0AVI2 2057 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 IGLV1-44P01699 117 aa12.54□□□□□ -0.4
SMC4-204ENST00000462787 EGR2P11161 476 aaPredicted RBP12.54□□□□□ -0.4
SMC4-204ENST00000462787 DUX4L9Q6RFH8 374 aaPredicted RBP12.54□□□□□ -0.4
SMC4-204ENST00000462787 CEP250Q9BV73 2442 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 KIAA1671Q9BY89 1806 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 PRSS29PA6NIE9 313 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 FAM110DQ8TAY7 271 aaPredicted RBP12.53□□□□□ -0.4
SMC4-204ENST00000462787 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 PEMTQ9UBM1 199 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 DKK1O94907 266 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 MORN5Q5VZ52 161 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 C8orf31Q8N9H6 132 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 SDHAF1A6NFY7 115 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 P0C879 139 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 CACNA1EQ15878 2313 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 TRAV26-1A0A087WT03 109 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 PRIMA1Q86XR5 153 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 ZNF295-AS1Q8N0V1 137 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 USMG5Q96IX5 58 aa12.53□□□□□ -0.4
SMC4-204ENST00000462787 TRGV2A0A075B6R0 118 aa12.52□□□□□ -0.4
SMC4-204ENST00000462787 ZNF493Q6ZR52 646 aa12.52□□□□□ -0.4
SMC4-204ENST00000462787 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms