RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MT-ND6P03923 174 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 AMY1AP04745 511 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 C8orf88P0DMB2 117 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 RANP62826 216 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 WDR73Q6P4I2 378 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 NOTCH1P46531 2555 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 SNURFLB1AK76 121 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 ZNF90Q03938 601 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 FBN2P35556 2912 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 OR4C46A6NHA9 309 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 G3V4G9 280 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 LY6LH3BQJ8 138 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 M0R143 59 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 ORM2P19652 201 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 GNG4P50150 75 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 TMEM183BQ1AE95 376 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 NUP35Q8NFH5 326 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 PIFOQ8TCI5 191 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 SMIM12Q96EX1 92 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 ALKBH7Q9BT30 221 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 NRN1Q9NPD7 142 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 ZNF324O75467 553 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 IGHG4P01861 327 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 IGLC2P0DOY2 106 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 IGLC3P0DOY3 106 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 INSL3P51460 131 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 TCTEX1D4Q5JR98 221 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 EBLN2Q6P2I7 272 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 GTSF1Q8WW33 167 aa5.69□□□□□ -1.5
CDC42BPA-208ENST00000442054 IGHV4OR15-8A0A075B7B6 117 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 IGHV3OR16-12A0A075B7B8 117 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 A0A087WW49 117 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 TEX22C9J3V5 150 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 MRPS12O15235 138 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 CA1P00915 261 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 LTAP01374 205 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 C3orf79P0CE67 100 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 PYYP10082 97 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 NUDT10Q8NFP7 164 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 NPBQ8NG41 125 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 C4orf3Q8WVX3 66 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 NUDT11Q96G61 164 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 ZNF256Q9Y2P7 627 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 TRBV6-1A0A0K0K1D8 114 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 TMEM116Q8NCL8 245 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 TRAV30A0A087WSZ9 112 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 TRBV7-1A0A0A6YYK4 115 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 DLEU1O43261 78 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 HYPMO75409 117 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 SCGB1D1O95968 90 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 FOXA3P55318 350 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 COX19Q49B96 90 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 RNF2Q99496 336 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 CITED1Q99966 193 aa5.68□□□□□ -1.5
CDC42BPA-208ENST00000442054 NPSP0C0P6 89 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 RPL35AP18077 110 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 IBA57Q5T440 356 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 OR4B1Q8NGF8 309 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 DNAJC4Q9NNZ3 241 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 H3BUA1 57 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 HLA-DQA1P01909 254 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 LINC00614P0C842 121 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 HTN1P15515 57 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 SUMO1P63165 101 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 EBI3Q14213 229 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 C18orf65Q6ZTR6 163 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 ZNF491Q8N8L2 437 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 DLX4Q92988 240 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 PEX7O00628 323 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 ID1P41134 155 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 C4orf48Q5BLP8 95 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 CT83Q5H943 113 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 VN1R17PQ8TDU5 208 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 NPIPB3Q92617 1050 aa5.67□□□□□ -1.5
CDC42BPA-208ENST00000442054 IGKV3-20P01619 116 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 IGF1P05019 195 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 IL4P05112 153 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 NDPQ00604 133 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 KIAA1644Q3SXP7 199 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 FBLN7Q53RD9 439 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 TOMM20LQ6UXN7 152 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 OR1B1Q8NGR6 318 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 ZNF492Q9P255 531 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 OR11H12B2RN74 326 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 NDUFA3O95167 84 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 SRIP30626 198 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 ATP5L2Q7Z4Y8 100 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 STPG4Q8N801 248 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 NHLRC2Q8NBF2 726 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 OR9G4Q8NGQ1 327 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 RAX2Q96IS3 184 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 C17orf77Q96MU5 243 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 TRGV9Q99603 122 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 NBPF19A0A087WUL8 3843 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 OTOGQ6ZRI0 2925 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 ZNF253O75346 499 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 SNRPD3P62318 126 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 C19orf35Q6ZS72 473 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 STHQ8IWL8 128 aa5.66□□□□□ -1.5
CDC42BPA-208ENST00000442054 RNF24Q9Y225 148 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms