RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PRB4P10163 310 aaPredicted RBP12.71□□□□□ -0.38
PTPN13-204ENST00000436978 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.38
PTPN13-204ENST00000436978 NEGR1Q7Z3B1 354 aa12.71□□□□□ -0.38
PTPN13-204ENST00000436978 KIAA1549Q9HCM3 1950 aa12.71□□□□□ -0.38
PTPN13-204ENST00000436978 PRIMA1Q86XR5 153 aa12.7□□□□□ -0.38
PTPN13-204ENST00000436978 IGHV1OR15-1A0A075B7D0 117 aa12.7□□□□□ -0.38
PTPN13-204ENST00000436978 IGKV1-6A0A0C4DH72 117 aa12.7□□□□□ -0.38
PTPN13-204ENST00000436978 SPINK13Q1W4C9 94 aa12.7□□□□□ -0.38
PTPN13-204ENST00000436978 MRPL52Q86TS9 123 aaKnown RBP12.7□□□□□ -0.38
PTPN13-204ENST00000436978 DLX4Q92988 240 aaPredicted RBP12.7□□□□□ -0.38
PTPN13-204ENST00000436978 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
PTPN13-204ENST00000436978 ELANEP08246 267 aa12.7□□□□□ -0.38
PTPN13-204ENST00000436978 Q6ZRM9 215 aa12.7□□□□□ -0.38
PTPN13-204ENST00000436978 ZNF134P52741 427 aa12.7□□□□□ -0.38
PTPN13-204ENST00000436978 XCL2Q9UBD3 114 aa12.69□□□□□ -0.38
PTPN13-204ENST00000436978 MED12LQ86YW9 2145 aa12.69□□□□□ -0.38
PTPN13-204ENST00000436978 IGHV2-5P01817 119 aa12.69□□□□□ -0.38
PTPN13-204ENST00000436978 WDR86Q86TI4 376 aa12.69□□□□□ -0.38
PTPN13-204ENST00000436978 BCL6BQ8N143 479 aaPredicted RBP12.69□□□□□ -0.38
PTPN13-204ENST00000436978 C5orf24Q7Z6I8 188 aa12.69□□□□□ -0.38
PTPN13-204ENST00000436978 MAPK1IP1LQ8NDC0 245 aa12.69□□□□□ -0.38
PTPN13-204ENST00000436978 VPREB3Q9UKI3 123 aa12.69□□□□□ -0.38
PTPN13-204ENST00000436978 C15orf65H3BRN8 121 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 THAP8Q8NA92 274 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 ATP6V0BQ99437 205 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 ZNRD1Q9P1U0 126 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 PAX9P55771 341 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 PKIGQ9Y2B9 76 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 FAM215AQ9Y5M1 114 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 PRSS33Q8NF86 280 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 INS-IGF2F8WCM5 200 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 CHAC1Q9BUX1 264 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 SPXQ9BT56 116 aa12.68□□□□□ -0.38
PTPN13-204ENST00000436978 SLAQ13239 276 aa12.67□□□□□ -0.38
PTPN13-204ENST00000436978 IGHV7-4-1A0A0J9YVY3 117 aa12.67□□□□□ -0.38
PTPN13-204ENST00000436978 SMKR1H3BMG3 65 aa12.67□□□□□ -0.38
PTPN13-204ENST00000436978 KLF2Q9Y5W3 355 aaPredicted RBP12.67□□□□□ -0.38
PTPN13-204ENST00000436978 PCDH15Q96QU1 1955 aa12.67□□□□□ -0.38
PTPN13-204ENST00000436978 G3V318 75 aa12.67□□□□□ -0.38
PTPN13-204ENST00000436978 TMEM243Q9BU79 118 aa12.67□□□□□ -0.38
PTPN13-204ENST00000436978 HCFC1P51610 2035 aa12.67□□□□□ -0.38
PTPN13-204ENST00000436978 NCOA6Q14686 2063 aaPredicted RBP12.66□□□□□ -0.38
PTPN13-204ENST00000436978 SSBP2P81877 361 aaPredicted RBP12.66□□□□□ -0.38
PTPN13-204ENST00000436978 DMRTC2Q8IXT2 367 aaPredicted RBP12.66□□□□□ -0.38
PTPN13-204ENST00000436978 HOXD3P31249 432 aaPredicted RBP12.66□□□□□ -0.38
PTPN13-204ENST00000436978 Q8N8P6 123 aa12.66□□□□□ -0.38
PTPN13-204ENST00000436978 TP53TG1Q9Y2A0 90 aa12.66□□□□□ -0.38
PTPN13-204ENST00000436978 NKAPP1Q8N9T2 125 aa12.66□□□□□ -0.38
PTPN13-204ENST00000436978 SHISA9B4DS77 424 aa12.65□□□□□ -0.38
PTPN13-204ENST00000436978 SLX1AQ9BQ83 275 aa12.65□□□□□ -0.38
PTPN13-204ENST00000436978 MEGF9Q9H1U4 602 aa12.65□□□□□ -0.38
PTPN13-204ENST00000436978 C2orf82Q6UX34 121 aa12.65□□□□□ -0.38
PTPN13-204ENST00000436978 FREM1Q5H8C1 2179 aa12.65□□□□□ -0.38
PTPN13-204ENST00000436978 MLANAQ16655 118 aa12.65□□□□□ -0.38
PTPN13-204ENST00000436978 SIGMAR1Q99720 223 aa12.65□□□□□ -0.38
PTPN13-204ENST00000436978 KLK9Q9UKQ9 250 aa12.65□□□□□ -0.38
PTPN13-204ENST00000436978 PMVKQ15126 192 aa12.65□□□□□ -0.39
PTPN13-204ENST00000436978 ARTNQ5T4W7 220 aa12.64□□□□□ -0.39
PTPN13-204ENST00000436978 VWC2LB2RUY7 222 aa12.64□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE2EQ4V326 116 aa12.64□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE2DQ9UEU5 116 aa12.64□□□□□ -0.39
PTPN13-204ENST00000436978 FOXI2Q6ZQN5 318 aa12.64□□□□□ -0.39
PTPN13-204ENST00000436978 hDV102S1A0JD36 115 aa12.64□□□□□ -0.39
PTPN13-204ENST00000436978 FAM104BQ5XKR9 115 aa12.64□□□□□ -0.39
PTPN13-204ENST00000436978 ANAPC13Q9BS18 74 aa12.64□□□□□ -0.39
PTPN13-204ENST00000436978 DSCAMO60469 2012 aa12.64□□□□□ -0.39
PTPN13-204ENST00000436978 Q0VG73 95 aa12.64□□□□□ -0.39
PTPN13-204ENST00000436978 PCNX3Q9H6A9 2034 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 CFHR3Q02985 330 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 TMEM256Q8N2U0 113 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 IGHV2-70P01814 119 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 SMIM27A0A1W2PRY6 76 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 ZNF503-AS2A6NEH8 195 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE12JA6NER3 117 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE1Q13065 139 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE4Q13068 117 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 GAGE5Q13069 117 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 VWC2Q2TAL6 325 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 MALRD1Q5VYJ5 2156 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 DEFB113Q30KQ7 82 aa12.63□□□□□ -0.39
PTPN13-204ENST00000436978 NBASA2RRP1 2371 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 NOTCH3Q9UM47 2321 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 TEX48A0A1B0GUV7 120 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 IGFL2Q6UWQ7 119 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 RBAKDNA6NC62 111 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 IGLV3-1P01715 115 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 TANC2Q9HCD6 1990 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 PRR25Q96S07 402 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 NDUFS6O75380 124 aaKnown RBP12.62□□□□□ -0.39
PTPN13-204ENST00000436978 C3orf79P0CE67 100 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 PCP4P48539 62 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 ZFAND6Q6FIF0 208 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 RNF152Q8N8N0 203 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 LINC00479Q96M42 142 aa12.62□□□□□ -0.39
PTPN13-204ENST00000436978 FAM231DQ6ZW35 169 aa12.61□□□□□ -0.39
PTPN13-204ENST00000436978 CACNA1GO43497 2377 aa12.61□□□□□ -0.39
PTPN13-204ENST00000436978 DEFB104AQ8WTQ1 72 aa12.61□□□□□ -0.39
PTPN13-204ENST00000436978 H3BMM0 161 aa12.61□□□□□ -0.39
PTPN13-204ENST00000436978 DUX4L9Q6RFH8 374 aaPredicted RBP12.61□□□□□ -0.39
PTPN13-204ENST00000436978 MRPL53Q96EL3 112 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms