RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CKS2P33552 79 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 UCNP55089 124 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 BVES-AS1Q5T3Y7 98 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 ARL6IP6Q8N6S5 226 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 ZNF502Q8TBZ5 544 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 AJUBAQ96IF1 538 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 MSRB1Q9NZV6 116 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 LINC01548A6NM66 108 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 SAA4P35542 130 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 UBE2V1Q13404 147 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 FOXE3Q13461 319 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 FAM110DQ8TAY7 271 aaPredicted RBP9.14□□□□□ -0.95
CD44-209ENST00000433892 UBTD1Q9HAC8 227 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 IGHV2-70DA0A0C4DH43 119 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 FBLL1A6NHQ2 334 aaKnown RBP9.14□□□□□ -0.95
CD44-209ENST00000433892 G3V318 75 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 BUB3O43684 328 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 NPYP01303 97 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 IGLC6P0CF74 106 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 UBE2E1P51965 193 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 RPS20P60866 119 aaKnown RBP9.14□□□□□ -0.95
CD44-209ENST00000433892 ZFAND3Q9H8U3 227 aa9.14□□□□□ -0.95
CD44-209ENST00000433892 CLEC19AQ6UXS0 136 aa9.13□□□□□ -0.95
CD44-209ENST00000433892 PIP4P2Q8N4L2 257 aa9.13□□□□□ -0.95
CD44-209ENST00000433892 SPTAN1Q13813 2472 aaKnown RBP9.13□□□□□ -0.95
CD44-209ENST00000433892 IGHV3-49A0A0A0MS15 119 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 FABP5P3A8MUU1 101 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 COX8AP10176 69 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 PPIFP30405 207 aaKnown RBP9.12□□□□□ -0.95
CD44-209ENST00000433892 TCTAP57738 103 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 C12orf54Q6X4T0 127 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 PPP1R14DQ9NXH3 145 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 CLPSL1A2RUU4 121 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 TAX1BP3O14907 124 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 S100A7P31151 101 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 CACNG7P62955 275 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 NHLH1Q02575 133 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 PAX8Q06710 450 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 VAMP3Q15836 100 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 PRSS57Q6UWY2 283 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 IL17RELQ6ZVW7 336 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
CD44-209ENST00000433892 ZNF207O43670 478 aaKnown RBP9.11□□□□□ -0.95
CD44-209ENST00000433892 GAS8-AS1O95177 125 aa9.11□□□□□ -0.95
CD44-209ENST00000433892 GOSR1O95249 250 aa9.11□□□□□ -0.95
CD44-209ENST00000433892 HBDP02042 147 aa9.11□□□□□ -0.95
CD44-209ENST00000433892 HIST1H1AQ02539 215 aaPredicted RBP9.11□□□□□ -0.95
CD44-209ENST00000433892 ANKRD39Q53RE8 183 aa9.11□□□□□ -0.95
CD44-209ENST00000433892 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.11□□□□□ -0.95
CD44-209ENST00000433892 BPESC1Q9GZL8 116 aa9.11□□□□□ -0.95
CD44-209ENST00000433892 C2orf91Q6ZV80 131 aa9.11□□□□□ -0.95
CD44-209ENST00000433892 WFDC3Q8IUB2 231 aa9.11□□□□□ -0.95
CD44-209ENST00000433892 DEFB125Q8N687 156 aa9.11□□□□□ -0.95
CD44-209ENST00000433892 PSMG3-AS1Q96PY0 264 aa9.11□□□□□ -0.95
CD44-209ENST00000433892 EFNA4P52798 201 aa9.1□□□□□ -0.95
CD44-209ENST00000433892 LMO4P61968 165 aa9.1□□□□□ -0.95
CD44-209ENST00000433892 RNF185Q96GF1 192 aa9.1□□□□□ -0.95
CD44-209ENST00000433892 CELSR2Q9HCU4 2923 aa9.1□□□□□ -0.95
CD44-209ENST00000433892 CENPVL3A0A0U1RRI6 287 aa9.1□□□□□ -0.95
CD44-209ENST00000433892 CBY3A6NI87 242 aa9.1□□□□□ -0.95
CD44-209ENST00000433892 LGALS9BQ3B8N2 356 aa9.1□□□□□ -0.95
CD44-209ENST00000433892 LGALS9CQ6DKI2 356 aa9.1□□□□□ -0.95
CD44-209ENST00000433892 RAB9AP51151 201 aa9.09□□□□□ -0.95
CD44-209ENST00000433892 SRSF2Q01130 221 aaKnown RBP9.09□□□□□ -0.95
CD44-209ENST00000433892 TMEM219Q86XT9 240 aa9.09□□□□□ -0.95
CD44-209ENST00000433892 IFI27L1Q96BM0 104 aa9.09□□□□□ -0.95
CD44-209ENST00000433892 CNFNQ9BYD5 112 aa9.09□□□□□ -0.95
CD44-209ENST00000433892 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
CD44-209ENST00000433892 NPFFO15130 113 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 EVI2AP22794 236 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 LY6DQ14210 128 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 OR4C5Q8NGB2 326 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 EEF1AKMT3Q96AZ1 226 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 C18orf15Q96N68 181 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 C11orf21Q9P2W6 132 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 LINC00527Q9UJ94 153 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 IGHV3OR16-10A0A075B7F0 116 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 TRAV8-2A0A0B4J237 113 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 IGKV3D-20A0A0C4DH25 116 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 FGF6P10767 208 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 SFTPCP11686 197 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 GATA1P15976 413 aaPredicted RBP9.08□□□□□ -0.96
CD44-209ENST00000433892 SLC50A1Q9BRV3 221 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
CD44-209ENST00000433892 RBAKDNA6NC62 111 aa9.07□□□□□ -0.96
CD44-209ENST00000433892 KLK9Q2XQG4 91 aa9.07□□□□□ -0.96
CD44-209ENST00000433892 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
CD44-209ENST00000433892 C5orf56Q8N8D9 126 aa9.07□□□□□ -0.96
CD44-209ENST00000433892 RNASE8Q8TDE3 154 aaKnown RBP9.07□□□□□ -0.96
CD44-209ENST00000433892 METTL26Q96S19 204 aa9.07□□□□□ -0.96
CD44-209ENST00000433892 DKK2Q9UBU2 259 aa9.07□□□□□ -0.96
CD44-209ENST00000433892 KLK9Q9UKQ9 250 aa9.07□□□□□ -0.96
CD44-209ENST00000433892 TNFRSF6BO95407 300 aa9.07□□□□□ -0.96
CD44-209ENST00000433892 PPBPP02775 128 aa9.07□□□□□ -0.96
CD44-209ENST00000433892 Q6ZQT7 251 aa9.07□□□□□ -0.96
CD44-209ENST00000433892 TRBV7-1A0A0A6YYK4 115 aa9.06□□□□□ -0.96
CD44-209ENST00000433892 CD5LO43866 347 aa9.06□□□□□ -0.96
CD44-209ENST00000433892 LEPP41159 167 aa9.06□□□□□ -0.96
CD44-209ENST00000433892 TMEM78Q5T7P6 136 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms