RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 CD5LO43866 347 aa13.46□□□□□ -0.25
SMARCA4-203ENST00000429416 CKS1BP61024 79 aa13.46□□□□□ -0.25
SMARCA4-203ENST00000429416 A0A096LPF7 62 aa13.46□□□□□ -0.25
SMARCA4-203ENST00000429416 PTPRSQ13332 1948 aa13.46□□□□□ -0.26
SMARCA4-203ENST00000429416 IGHV1OR15-1A0A075B7D0 117 aa13.46□□□□□ -0.26
SMARCA4-203ENST00000429416 PRSS57Q6UWY2 283 aa13.46□□□□□ -0.26
SMARCA4-203ENST00000429416 ANAPC10Q9UM13 185 aa13.46□□□□□ -0.26
SMARCA4-203ENST00000429416 LY6G6DO95868 133 aa13.45□□□□□ -0.26
SMARCA4-203ENST00000429416 Q86TA4 180 aa13.45□□□□□ -0.26
SMARCA4-203ENST00000429416 LSM4Q9Y4Z0 139 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-203ENST00000429416 IGHV3-64A0A075B6Q5 118 aa13.45□□□□□ -0.26
SMARCA4-203ENST00000429416 TRAV9-1A0A075B6T8 112 aa13.45□□□□□ -0.26
SMARCA4-203ENST00000429416 F6UB75 175 aa13.45□□□□□ -0.26
SMARCA4-203ENST00000429416 JOSD1Q15040 202 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-203ENST00000429416 FAM90A2PQ658T7 463 aa13.45□□□□□ -0.26
SMARCA4-203ENST00000429416 IGHV4OR15-8A0A075B7B6 117 aa13.44□□□□□ -0.26
SMARCA4-203ENST00000429416 A0A087WW49 117 aa13.44□□□□□ -0.26
SMARCA4-203ENST00000429416 NPBQ8NG41 125 aa13.44□□□□□ -0.26
SMARCA4-203ENST00000429416 POU2AF1Q16633 256 aa13.44□□□□□ -0.26
SMARCA4-203ENST00000429416 A0A087X0M5 115 aa13.44□□□□□ -0.26
SMARCA4-203ENST00000429416 A0A1B0GX30 115 aa13.44□□□□□ -0.26
SMARCA4-203ENST00000429416 D6R8Y8 96 aa13.44□□□□□ -0.26
SMARCA4-203ENST00000429416 H3BRN7 92 aa13.43□□□□□ -0.26
SMARCA4-203ENST00000429416 SLC25A34Q6PIV7 304 aa13.43□□□□□ -0.26
SMARCA4-203ENST00000429416 TRAV13-1A0A0B4J241 112 aa13.43□□□□□ -0.26
SMARCA4-203ENST00000429416 C8orf49Q96NF6 230 aa13.43□□□□□ -0.26
SMARCA4-203ENST00000429416 PMCHL2Q9BQD1 86 aa13.43□□□□□ -0.26
SMARCA4-203ENST00000429416 MS4A6AQ9H2W1 248 aa13.43□□□□□ -0.26
SMARCA4-203ENST00000429416 IGLV2-23P01705 113 aa13.43□□□□□ -0.26
SMARCA4-203ENST00000429416 PARD6GQ9BYG4 376 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-203ENST00000429416 MED12LQ86YW9 2145 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 ZNF491Q8N8L2 437 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 CARHSP1Q9Y2V2 147 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 SRSF2Q01130 221 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 KIAA1549LQ6ZVL6 1849 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 MYO9AB2RTY4 2548 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 TRAV1-1A0A0B4J248 108 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 WIPF3A6NGB9 483 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 HBDP02042 147 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 RPL24P83731 157 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 CSTL1Q9H114 145 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 FNDC4Q9H6D8 234 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 SNAI2O43623 268 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 PFN1P07737 140 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 IGF2BP2-AS1Q96M15 143 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 SPAG8Q99932 426 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 TRBV7-9A0A0J9YWB2 115 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 DNAL4O96015 105 aa13.42□□□□□ -0.26
SMARCA4-203ENST00000429416 IGLV1-47P01700 117 aa13.41□□□□□ -0.26
SMARCA4-203ENST00000429416 DMRTA1Q5VZB9 504 aa13.41□□□□□ -0.26
SMARCA4-203ENST00000429416 ATP6V0BQ99437 205 aa13.41□□□□□ -0.26
SMARCA4-203ENST00000429416 VCYO14598 125 aa13.41□□□□□ -0.26
SMARCA4-203ENST00000429416 LINC01551Q86U37 167 aa13.41□□□□□ -0.26
SMARCA4-203ENST00000429416 UTRNP46939 3433 aa13.41□□□□□ -0.26
SMARCA4-203ENST00000429416 A0A0J9YY99 117 aa13.41□□□□□ -0.26
SMARCA4-203ENST00000429416 MYCNOSP40205 109 aa13.41□□□□□ -0.26
SMARCA4-203ENST00000429416 LOC102724200A0A096LPH7 203 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 RHODO00212 210 aa13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 LINC00614P0C842 121 aa13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 SLC25A2Q9BXI2 301 aa13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 A0A087WWC5 75 aa13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 CDSNQ15517 529 aa13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 VPS25Q9BRG1 176 aa13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 TNFRSF13BO14836 293 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 ADMP35318 185 aa13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 ANXA2RQ3ZCQ2 193 aa13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 CDX1P47902 265 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-203ENST00000429416 CD300EQ496F6 205 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 CGB3P0DN86 165 aa13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 LINC00158P58513 81 aa13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 FOXI2Q6ZQN5 318 aa13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 ERASQ7Z444 233 aa13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 TMEM86BQ8N661 226 aa13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 NOP10Q9NPE3 64 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 LAGE3Q14657 143 aa13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 EREGO14944 169 aa13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 ATP5L2Q7Z4Y8 100 aa13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 SMAD5-AS1Q9Y6J3 95 aa13.39□□□□□ -0.27
SMARCA4-203ENST00000429416 HLA-DMBP28068 263 aa13.38□□□□□ -0.27
SMARCA4-203ENST00000429416 SMKR1H3BMG3 65 aa13.38□□□□□ -0.27
SMARCA4-203ENST00000429416 TEX43Q6ZNM6 134 aa13.38□□□□□ -0.27
SMARCA4-203ENST00000429416 PAX4O43316 350 aa13.38□□□□□ -0.27
SMARCA4-203ENST00000429416 NCKAP5O14513 1909 aa13.38□□□□□ -0.27
SMARCA4-203ENST00000429416 SERF1AO75920 110 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 IGHG2P01859 326 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 C6orf226Q5I0X4 101 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 ZNRF2Q8NHG8 242 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 SMIM12Q96EX1 92 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 TMEM75Q8N9X5 138 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 MRPL16Q9NX20 251 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 SS18Q15532 418 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 NUP35Q8NFH5 326 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 WIPF2Q8TF74 440 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 CHTOPQ9Y3Y2 248 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 TLN2Q9Y4G6 2542 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 AMN1Q8IY45 258 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 A6NDX4 124 aa13.37□□□□□ -0.27
SMARCA4-203ENST00000429416 A8MWV9 139 aa13.36□□□□□ -0.27
SMARCA4-203ENST00000429416 TRAV9-2A0A087WT02 112 aa13.36□□□□□ -0.27
SMARCA4-203ENST00000429416 IGHV3-38A0A0C4DH36 116 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms