RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 IGLV11-55A0A075B6I3 123 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 SEC11AP67812 179 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 LGALS9BQ3B8N2 356 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 LGALS9CQ6DKI2 356 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 GATD1Q8NB37 220 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 CFHR4Q92496 578 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 NDUFS7O75251 213 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 PRSS1P07477 247 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 FGF6P10767 208 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 BMI1P35226 326 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 NBL1P41271 181 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 COTL1Q14019 142 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 ASH1LQ9NR48 2969 aaKnown RBP5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 BSNQ9UPA5 3926 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 IGHV3-49A0A0A0MS15 119 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 F8W735 103 aaPredicted RBP5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 SMAD7O15105 426 aaKnown RBP5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 GATA1P15976 413 aaPredicted RBP5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 TMEM11P17152 192 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 S100A7P31151 101 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 ZNF562Q6V9R5 426 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 U3KQK5 164 aa5.87□□□□□ -1.47
SMARCC1-202ENST00000425518 A6NDN8 102 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 LEPP41159 167 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 KIR3DS1Q14943 382 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 DYNAPQ8N1N2 210 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 RNF182Q8N6D2 247 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 TIMD4Q96H15 378 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 TTTY13Q9BZ97 58 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 SMAD5-AS1Q9Y6J3 95 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 MYO18BQ8IUG5 2567 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 FASNP49327 2511 aaKnown RBP5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 PRAC2D3DTV9 90 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 CTSGP08311 255 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 BOD1L2Q8IYS8 172 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 NPBQ8NG41 125 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 IGF2RP11717 2491 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 SAP30O75446 220 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 NDUFA3O95167 84 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 ECSCRQ19T08 205 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 OR11H6Q8NGC7 330 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 OR1N2Q8NGR9 330 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 MAP1LC3AQ9H492 121 aa5.86□□□□□ -1.47
SMARCC1-202ENST00000425518 FABP5P3A8MUU1 101 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 K7ERU9 68 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 RPS20P60866 119 aaKnown RBP5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 GTF2H5Q6ZYL4 71 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 LY6G5BQ8NDX9 201 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 A0A0G2JLM5 398 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 C9orf118A6NHY6 69 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 ZNF207O43670 478 aaKnown RBP5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 GCSHP23434 173 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 PRTN3P24158 256 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 JMJD8Q96S16 334 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 VKORC1Q9BQB6 163 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 MEGF9Q9H1U4 602 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 H3BRM9 83 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 CLEC3BP05452 202 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 HSD52Q0P140 79 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 VMO1Q7Z5L0 202 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 TTC9CQ8N5M4 171 aa5.85□□□□□ -1.47
SMARCC1-202ENST00000425518 TNFRSF6BO95407 300 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 IGHG4P01861 327 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 CCL21O00585 134 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 SCGB2A1O75556 95 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 IGLC6P0CF74 106 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 RIPPLY3P57055 190 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 IL17RELQ6ZVW7 336 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 OR9G4Q8NGQ1 327 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 OR2K2Q8NGT1 345 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 RNF185Q96GF1 192 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 FOXC2Q99958 501 aa5.84□□□□□ -1.47
SMARCC1-202ENST00000425518 C15orf32Q32M92 178 aa5.84□□□□□ -1.48
SMARCC1-202ENST00000425518 GTSCR1Q86UQ5 136 aa5.84□□□□□ -1.48
SMARCC1-202ENST00000425518 TMEM190Q8WZ59 177 aa5.84□□□□□ -1.48
SMARCC1-202ENST00000425518 DPF1Q92782 380 aa5.84□□□□□ -1.48
SMARCC1-202ENST00000425518 UFC1Q9Y3C8 167 aa5.84□□□□□ -1.48
SMARCC1-202ENST00000425518 FAM208BQ5VWN6 2430 aa5.84□□□□□ -1.48
SMARCC1-202ENST00000425518 IGKV2D-26A0A0A0MRZ7 120 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 J3KRW8 73 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 PPBPP02775 128 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 PAX8Q06710 450 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 CCDC144NLQ6NUI1 221 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 ADAMTSL5Q6ZMM2 481 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 SMIM15Q7Z3B0 74 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 OR4X2Q8NGF9 303 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 TMEM158Q8WZ71 300 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 TMEM160Q9NX00 188 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 IGHV7-81A0A0B4J1V7 117 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 K7EMI3 77 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 CDSNQ15517 529 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 CLEC19AQ6UXS0 136 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 ZNF575Q86XF7 245 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 SPCS1Q9Y6A9 102 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 EPG5Q9HCE0 2579 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 TRAV26-2A0A0B4J265 109 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 DTX2Q86UW9 622 aa5.83□□□□□ -1.48
SMARCC1-202ENST00000425518 FBLL1A6NHQ2 334 aaKnown RBP5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 ODF3BA8MYP8 253 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 M0R1W7 72 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms