RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 BOD1L2Q8IYS8 172 aa11.23□□□□□ -0.61
MSH5-206ENST00000423982 TMEM75Q8N9X5 138 aa11.23□□□□□ -0.61
MSH5-206ENST00000423982 CELSR1Q9NYQ6 3014 aa11.23□□□□□ -0.61
MSH5-206ENST00000423982 PLGLAQ15195 96 aa11.23□□□□□ -0.61
MSH5-206ENST00000423982 MRPL51Q4U2R6 128 aaKnown RBP11.23□□□□□ -0.61
MSH5-206ENST00000423982 AP1S3Q96PC3 154 aa11.23□□□□□ -0.61
MSH5-206ENST00000423982 SHANK2-AS3Q9BTD1 123 aa11.23□□□□□ -0.61
MSH5-206ENST00000423982 IGKV2-40A0A087WW87 121 aaPredicted RBP11.22□□□□□ -0.61
MSH5-206ENST00000423982 A0A0G2JLM5 398 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 K7EIM0 57 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 NPYP01303 97 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 IGKV2D-40P01614 121 aaPredicted RBP11.22□□□□□ -0.61
MSH5-206ENST00000423982 ZNF414Q96IQ9 312 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 K7EMI3 77 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 SMAD7O15105 426 aaKnown RBP11.22□□□□□ -0.61
MSH5-206ENST00000423982 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 ADAMTSL5Q6ZMM2 481 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 ZNF491Q8N8L2 437 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 Q8TAT8 98 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 NRGNQ92686 78 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 HECTD1Q9ULT8 2610 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 H3BRN7 92 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 SH2D1AO60880 128 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 GATD1Q8NB37 220 aa11.22□□□□□ -0.61
MSH5-206ENST00000423982 H3BRM9 83 aa11.21□□□□□ -0.61
MSH5-206ENST00000423982 CNIH1O95406 144 aa11.21□□□□□ -0.61
MSH5-206ENST00000423982 C8orf31Q8N9H6 132 aa11.21□□□□□ -0.61
MSH5-206ENST00000423982 MSRB1Q9NZV6 116 aa11.21□□□□□ -0.61
MSH5-206ENST00000423982 WNK2Q9Y3S1 2297 aa11.21□□□□□ -0.61
MSH5-206ENST00000423982 TMEM189A5PLL7 270 aa11.21□□□□□ -0.62
MSH5-206ENST00000423982 MRPS12O15235 138 aaKnown RBP11.21□□□□□ -0.62
MSH5-206ENST00000423982 IGLV1-47P01700 117 aa11.21□□□□□ -0.62
MSH5-206ENST00000423982 ZNF493Q6ZR52 646 aa11.21□□□□□ -0.62
MSH5-206ENST00000423982 ORMDL3Q8N138 153 aa11.21□□□□□ -0.62
MSH5-206ENST00000423982 RNF125Q96EQ8 232 aa11.21□□□□□ -0.62
MSH5-206ENST00000423982 IGHV3OR16-8A0A075B7F1 116 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 K7EP34 96 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 CT45A10P0DMU9 189 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 LGALS9BQ3B8N2 356 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 LGALS9CQ6DKI2 356 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 IGKV2D-26A0A0A0MRZ7 120 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 A6NDN8 102 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 BUB1B-PAK6H3BSN5 160 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 IGHV3-23P01764 117 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 ZNF80P51504 273 aaPredicted RBP11.2□□□□□ -0.62
MSH5-206ENST00000423982 PAX8Q06710 450 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 HIST2H2BCQ6DN03 193 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 OR2K2Q8NGT1 345 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 IFI27L1Q96BM0 104 aa11.2□□□□□ -0.62
MSH5-206ENST00000423982 K7EQM0 130 aa11.19□□□□□ -0.62
MSH5-206ENST00000423982 HBDP02042 147 aa11.19□□□□□ -0.62
MSH5-206ENST00000423982 EGR2P11161 476 aaPredicted RBP11.19□□□□□ -0.62
MSH5-206ENST00000423982 HLA-DMBP28068 263 aa11.19□□□□□ -0.62
MSH5-206ENST00000423982 GTF2H5Q6ZYL4 71 aa11.19□□□□□ -0.62
MSH5-206ENST00000423982 TRBV6-1A0A0K0K1D8 114 aa11.19□□□□□ -0.62
MSH5-206ENST00000423982 CKS2P33552 79 aa11.19□□□□□ -0.62
MSH5-206ENST00000423982 TWIST1Q15672 202 aa11.19□□□□□ -0.62
MSH5-206ENST00000423982 U3KQK5 164 aa11.19□□□□□ -0.62
MSH5-206ENST00000423982 NPIPB5A8MRT5 1133 aa11.18□□□□□ -0.62
MSH5-206ENST00000423982 K7ERJ3 54 aa11.18□□□□□ -0.62
MSH5-206ENST00000423982 HSD52Q0P140 79 aa11.18□□□□□ -0.62
MSH5-206ENST00000423982 NAV2Q8IVL1 2488 aa11.18□□□□□ -0.62
MSH5-206ENST00000423982 TMEM238C9JI98 176 aa11.18□□□□□ -0.62
MSH5-206ENST00000423982 G3V4G9 280 aa11.18□□□□□ -0.62
MSH5-206ENST00000423982 PLA2G2AP14555 144 aa11.18□□□□□ -0.62
MSH5-206ENST00000423982 SPCS1Q9Y6A9 102 aa11.18□□□□□ -0.62
MSH5-206ENST00000423982 ANKRD17O75179 2603 aaKnown RBP11.18□□□□□ -0.62
MSH5-206ENST00000423982 EVI2AP22794 236 aa11.17□□□□□ -0.62
MSH5-206ENST00000423982 RPEQ96AT9 228 aa11.17□□□□□ -0.62
MSH5-206ENST00000423982 APCP25054 2843 aa11.17□□□□□ -0.62
MSH5-206ENST00000423982 A0A1B0GW15 77 aa11.17□□□□□ -0.62
MSH5-206ENST00000423982 WI2-2373I1.2A0A1W2PRP0 233 aa11.17□□□□□ -0.62
MSH5-206ENST00000423982 GATA1P15976 413 aaPredicted RBP11.17□□□□□ -0.62
MSH5-206ENST00000423982 PPIFP30405 207 aaKnown RBP11.17□□□□□ -0.62
MSH5-206ENST00000423982 FXYD2P54710 66 aa11.17□□□□□ -0.62
MSH5-206ENST00000423982 ZNF575Q86XF7 245 aa11.17□□□□□ -0.62
MSH5-206ENST00000423982 OR1N2Q8NGR9 330 aa11.17□□□□□ -0.62
MSH5-206ENST00000423982 ZFHX3Q15911 3703 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 IGHV3-35A0A0C4DH35 117 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 A0A1W2PPM0 123 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 TIMM23O14925 209 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 GOSR1O95249 250 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 GCSHP23434 173 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 PAX2Q02962 417 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 C11orf71Q6IPW1 123 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 VGLL1Q99990 258 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 CCDC168Q8NDH2 2452 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 Q6AWC8 147 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 DPF1Q92782 380 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 RAB1BQ9H0U4 201 aa11.16□□□□□ -0.62
MSH5-206ENST00000423982 J3QKU1 62 aa11.15□□□□□ -0.62
MSH5-206ENST00000423982 ZNF207O43670 478 aaKnown RBP11.15□□□□□ -0.62
MSH5-206ENST00000423982 NEGR1Q7Z3B1 354 aa11.15□□□□□ -0.62
MSH5-206ENST00000423982 OR9G4Q8NGQ1 327 aa11.15□□□□□ -0.62
MSH5-206ENST00000423982 AAMDCQ9H7C9 122 aa11.15□□□□□ -0.62
MSH5-206ENST00000423982 KAAG1Q9UBP8 84 aa11.15□□□□□ -0.62
MSH5-206ENST00000423982 FBLL1A6NHQ2 334 aaKnown RBP11.15□□□□□ -0.63
MSH5-206ENST00000423982 COX6B1P14854 86 aa11.15□□□□□ -0.63
MSH5-206ENST00000423982 NPFFR1Q9GZQ6 430 aa11.15□□□□□ -0.63
MSH5-206ENST00000423982 GNG7O60262 68 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms