RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PPP1R14DQ9NXH3 145 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 NPIPB6E9PJ23 425 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 M0R2Z0 102 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 CT45A10P0DMU9 189 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 RAB5CP51148 216 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 UBE2G2P60604 165 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 SUMO1P63165 101 aaKnown RBP6.76□□□□□ -1.33
PDGFC-202ENST00000422544 SPINK13Q1W4C9 94 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 ALKAL2Q6UX46 152 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 CSNK1G2-AS1Q8NCQ2 148 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 CMTM2Q8TAZ6 248 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 RXFP4Q8TDU9 374 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 VGLL1Q99990 258 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 AGPAT4-IT1Q9H0P7 198 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 RPH3ALQ9UNE2 315 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 YTHDF2Q9Y5A9 579 aaKnown RBP6.76□□□□□ -1.33
PDGFC-202ENST00000422544 U3KQK5 164 aa6.76□□□□□ -1.33
PDGFC-202ENST00000422544 TRAV12-2A0A075B6T6 113 aa6.75□□□□□ -1.33
PDGFC-202ENST00000422544 A0A1W2PRE2 83 aa6.75□□□□□ -1.33
PDGFC-202ENST00000422544 DIRC3C9JPN6 131 aa6.75□□□□□ -1.33
PDGFC-202ENST00000422544 SLC25A5P05141 298 aaKnown RBP6.75□□□□□ -1.33
PDGFC-202ENST00000422544 GNG5P63218 68 aa6.75□□□□□ -1.33
PDGFC-202ENST00000422544 CCL20P78556 96 aa6.75□□□□□ -1.33
PDGFC-202ENST00000422544 C1QTNF4Q9BXJ3 329 aa6.75□□□□□ -1.33
PDGFC-202ENST00000422544 TP53TG1Q9Y2A0 90 aa6.75□□□□□ -1.33
PDGFC-202ENST00000422544 FAM74A7A6NL05 159 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 ZNF705EA8MWA4 302 aaPredicted RBP6.74□□□□□ -1.33
PDGFC-202ENST00000422544 GGTLC3B5MD39 225 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 J3KRW8 73 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 CRXO43186 299 aaPredicted RBP6.74□□□□□ -1.33
PDGFC-202ENST00000422544 KIR3DS1Q14943 382 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 C9orf47Q6ZRZ4 202 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 GOLT1AQ6ZVE7 132 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 OR11H2Q8NH07 326 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 LINC00477Q96M19 166 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 RARRES2Q99969 163 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 EPDR1Q9UM22 224 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 ALMS1Q8TCU4 4167 aa6.74□□□□□ -1.33
PDGFC-202ENST00000422544 IGHV3OR16-12A0A075B7B8 117 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 TRAV1-1A0A0B4J248 108 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 RBAKDNA6NC62 111 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 PAGE4O60829 102 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 IFNA7P01567 189 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 AMBPP02760 352 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 TCRAP04437 139 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 TSPOP30536 169 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 CDKN1BP46527 198 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 TMEM78Q5T7P6 136 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 CST9LP1Q5W188 147 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 C1orf158Q8N1D5 194 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 ARL6IP6Q8N6S5 226 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 C5orf17Q8NAS9 161 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 Q8TAT8 98 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 IGF2BP2-AS1Q96M15 143 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 ZNF492Q9P255 531 aa6.73□□□□□ -1.33
PDGFC-202ENST00000422544 PCLOQ9Y6V0 5065 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 TRAV8-1A0A0A6YYK1 113 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 TEX46H3BTG2 121 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 HBE1P02100 147 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 RBMY1A1P0DJD3 496 aaKnown RBP6.72□□□□□ -1.33
PDGFC-202ENST00000422544 RBMY1CP0DJD4 496 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 LEPP41159 167 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 ZNF138P52744 262 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 RBMY1FQ15415 496 aaKnown RBP6.72□□□□□ -1.33
PDGFC-202ENST00000422544 FAM19A4Q96LR4 140 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 SGK494Q96LW2 274 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 ODF3Q96PU9 254 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 NKX6-2Q9C056 277 aaPredicted RBP6.72□□□□□ -1.33
PDGFC-202ENST00000422544 GNG13Q9P2W3 67 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 GOLT1BQ9Y3E0 138 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 X6R8D5 127 aa6.72□□□□□ -1.33
PDGFC-202ENST00000422544 DEFB4AO15263 64 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 INSP01308 110 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 PRM2P04554 102 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 RNASE4P34096 147 aaKnown RBP6.71□□□□□ -1.34
PDGFC-202ENST00000422544 ATP5G3P48201 142 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 PPT1P50897 306 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 GFI1BQ5VTD9 330 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 ZNF705AQ6ZN79 300 aaPredicted RBP6.71□□□□□ -1.34
PDGFC-202ENST00000422544 CCDC28AQ8IWP9 274 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 LINC00479Q96M42 142 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 LINC01587Q99440 93 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 ATG101Q9BSB4 218 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 TMEM208Q9BTX3 173 aa6.71□□□□□ -1.34
PDGFC-202ENST00000422544 HECTD4Q9Y4D8 3996 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 TRAV12-3A0A0B4J271 114 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 TRAV34A0A0B4J273 112 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 IGHV4-28A0A0C4DH34 117 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 A0A0J9YWU9 116 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 SERTM2A0A1B0GWG4 89 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 KLLNB2CW77 178 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 K7EQM0 130 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 PEX7O00628 323 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 GPX1P07203 203 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 CRISP2P16562 243 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 BLOC1S1P78537 153 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 BTN1A1Q13410 526 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 TEX261Q6UWH6 196 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 ZFAND2AQ8N6M9 145 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 CYB561D1Q8N8Q1 229 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms