RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 GFRALQ6UXV0 394 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 GTSCR1Q86UQ5 136 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 ZMAT4Q9H898 229 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 TLN1Q9Y490 2541 aaKnown RBP16.59■□□□□ 0.25
USP48-205ENST00000421625 PRSS1P07477 247 aa16.59■□□□□ 0.25
USP48-205ENST00000421625 PHLDA1Q8WV24 401 aaPredicted RBP16.59■□□□□ 0.25
USP48-205ENST00000421625 GATA1P15976 413 aaPredicted RBP16.59■□□□□ 0.25
USP48-205ENST00000421625 HLA-DMBP28068 263 aa16.59■□□□□ 0.25
USP48-205ENST00000421625 SAMD13Q5VXD3 122 aa16.59■□□□□ 0.25
USP48-205ENST00000421625 WFDC12Q8WWY7 111 aa16.59■□□□□ 0.25
USP48-205ENST00000421625 DYNLRB1Q9NP97 96 aa16.59■□□□□ 0.25
USP48-205ENST00000421625 NHP2Q9NX24 153 aaKnown RBP16.59■□□□□ 0.25
USP48-205ENST00000421625 PIFOQ8TCI5 191 aa16.58■□□□□ 0.25
USP48-205ENST00000421625 HIGD1BQ9P298 99 aa16.58■□□□□ 0.25
USP48-205ENST00000421625 TRBV25-1A0A075B6N4 114 aa16.58■□□□□ 0.24
USP48-205ENST00000421625 FOXC1Q12948 553 aa16.57■□□□□ 0.24
USP48-205ENST00000421625 RALYQ9UKM9 306 aaKnown RBP16.57■□□□□ 0.24
USP48-205ENST00000421625 LYNX1G3V0Z9 82 aa16.57■□□□□ 0.24
USP48-205ENST00000421625 TIMM23O14925 209 aa16.57■□□□□ 0.24
USP48-205ENST00000421625 IGKCP01834 107 aa16.57■□□□□ 0.24
USP48-205ENST00000421625 LYNX1P0DP58 116 aa16.57■□□□□ 0.24
USP48-205ENST00000421625 FCER1GP30273 86 aa16.57■□□□□ 0.24
USP48-205ENST00000421625 FOXC2Q99958 501 aa16.57■□□□□ 0.24
USP48-205ENST00000421625 A0A0G2JNJ9 132 aa16.56■□□□□ 0.24
USP48-205ENST00000421625 COX8CQ7Z4L0 72 aa16.56■□□□□ 0.24
USP48-205ENST00000421625 GTSF1LQ9H1H1 148 aa16.56■□□□□ 0.24
USP48-205ENST00000421625 Q9UFV3 132 aa16.56■□□□□ 0.24
USP48-205ENST00000421625 ZNF207O43670 478 aaKnown RBP16.56■□□□□ 0.24
USP48-205ENST00000421625 TNFRSF6BO95407 300 aa16.56■□□□□ 0.24
USP48-205ENST00000421625 IGHV3-23P01764 117 aa16.56■□□□□ 0.24
USP48-205ENST00000421625 ORM1P02763 201 aa16.56■□□□□ 0.24
USP48-205ENST00000421625 RELNP78509 3460 aa16.56■□□□□ 0.24
USP48-205ENST00000421625 PPIFP30405 207 aaKnown RBP16.55■□□□□ 0.24
USP48-205ENST00000421625 ZC2HC1BQ5TFG8 222 aa16.55■□□□□ 0.24
USP48-205ENST00000421625 FAM57AQ8TBR7 257 aa16.55■□□□□ 0.24
USP48-205ENST00000421625 TMEM158Q8WZ71 300 aa16.55■□□□□ 0.24
USP48-205ENST00000421625 NBASA2RRP1 2371 aa16.55■□□□□ 0.24
USP48-205ENST00000421625 SRSF8Q9BRL6 282 aaKnown RBP16.55■□□□□ 0.24
USP48-205ENST00000421625 LINC01546A6NGU7 62 aa16.54■□□□□ 0.24
USP48-205ENST00000421625 F8W735 103 aaPredicted RBP16.54■□□□□ 0.24
USP48-205ENST00000421625 AZU1P20160 251 aa16.54■□□□□ 0.24
USP48-205ENST00000421625 CEND1Q8N111 149 aa16.54■□□□□ 0.24
USP48-205ENST00000421625 PSMG3-AS1Q96PY0 264 aa16.54■□□□□ 0.24
USP48-205ENST00000421625 IGHG4P01861 327 aa16.54■□□□□ 0.24
USP48-205ENST00000421625 BMI1P35226 326 aa16.54■□□□□ 0.24
USP48-205ENST00000421625 RAB1BQ9H0U4 201 aa16.54■□□□□ 0.24
USP48-205ENST00000421625 SH3BGRL2Q9UJC5 107 aa16.54■□□□□ 0.24
USP48-205ENST00000421625 PTPRQQ9UMZ3 2332 aa16.54■□□□□ 0.24
USP48-205ENST00000421625 TMEM8BA6NDV4 472 aa16.53■□□□□ 0.24
USP48-205ENST00000421625 SHISA9B4DS77 424 aa16.53■□□□□ 0.24
USP48-205ENST00000421625 Q6ZS92 163 aa16.53■□□□□ 0.24
USP48-205ENST00000421625 IGHV3OR16-8A0A075B7F1 116 aa16.53■□□□□ 0.24
USP48-205ENST00000421625 LY6LH3BQJ8 138 aa16.53■□□□□ 0.24
USP48-205ENST00000421625 WFDC2Q14508 124 aa16.53■□□□□ 0.24
USP48-205ENST00000421625 FANCD2OSQ96PS1 177 aa16.53■□□□□ 0.24
USP48-205ENST00000421625 TMEM160Q9NX00 188 aa16.52■□□□□ 0.24
USP48-205ENST00000421625 SMAD5-AS1Q9Y6J3 95 aa16.52■□□□□ 0.24
USP48-205ENST00000421625 E7EQL1 145 aa16.52■□□□□ 0.23
USP48-205ENST00000421625 MAPKAPK5-AS1Q8N8E1 139 aa16.52■□□□□ 0.23
USP48-205ENST00000421625 TM2D2Q9BX73 214 aa16.52■□□□□ 0.23
USP48-205ENST00000421625 NXT2Q9NPJ8 142 aaKnown RBP16.52■□□□□ 0.23
USP48-205ENST00000421625 DPM2O94777 84 aa16.51■□□□□ 0.23
USP48-205ENST00000421625 SMAGPQ0VAQ4 97 aa16.51■□□□□ 0.23
USP48-205ENST00000421625 ERCC8Q13216 396 aa16.51■□□□□ 0.23
USP48-205ENST00000421625 IGFL3Q6UXB1 125 aa16.51■□□□□ 0.23
USP48-205ENST00000421625 TRAV40A0A0B4J280 105 aa16.51■□□□□ 0.23
USP48-205ENST00000421625 NBR2O15453 112 aa16.51■□□□□ 0.23
USP48-205ENST00000421625 MFAP4P55083 255 aa16.51■□□□□ 0.23
USP48-205ENST00000421625 RNF5Q99942 180 aa16.51■□□□□ 0.23
USP48-205ENST00000421625 TSSC4Q9Y5U2 329 aaPredicted RBP16.51■□□□□ 0.23
USP48-205ENST00000421625 IGLL5B9A064 214 aa16.5■□□□□ 0.23
USP48-205ENST00000421625 RPL7P18124 248 aaKnown RBP16.5■□□□□ 0.23
USP48-205ENST00000421625 CNFNQ9BYD5 112 aa16.5■□□□□ 0.23
USP48-205ENST00000421625 E9PLD3 99 aa16.5■□□□□ 0.23
USP48-205ENST00000421625 SPANXB1Q9NS25 103 aaPredicted RBP16.5■□□□□ 0.23
USP48-205ENST00000421625 POLEQ07864 2286 aa16.49■□□□□ 0.23
USP48-205ENST00000421625 IGLV11-55A0A075B6I3 123 aa16.49■□□□□ 0.23
USP48-205ENST00000421625 DTX2Q86UW9 622 aa16.49■□□□□ 0.23
USP48-205ENST00000421625 MRPL35Q9NZE8 188 aaKnown RBP16.49■□□□□ 0.23
USP48-205ENST00000421625 ONECUT1Q9UBC0 465 aa16.49■□□□□ 0.23
USP48-205ENST00000421625 CHD8Q9HCK8 2581 aa16.49■□□□□ 0.23
USP48-205ENST00000421625 AGRNO00468 2067 aa16.49■□□□□ 0.23
USP48-205ENST00000421625 IGHV3-35A0A0C4DH35 117 aa16.48■□□□□ 0.23
USP48-205ENST00000421625 DYNAPQ8N1N2 210 aa16.48■□□□□ 0.23
USP48-205ENST00000421625 SIGMAR1Q99720 223 aa16.48■□□□□ 0.23
USP48-205ENST00000421625 ARHGAP32A7KAX9 2087 aa16.48■□□□□ 0.23
USP48-205ENST00000421625 PRAC2D3DTV9 90 aa16.48■□□□□ 0.23
USP48-205ENST00000421625 H3BMG7 143 aa16.48■□□□□ 0.23
USP48-205ENST00000421625 PSMG4Q5JS54 123 aa16.48■□□□□ 0.23
USP48-205ENST00000421625 SH2D6Q7Z4S9 175 aa16.48■□□□□ 0.23
USP48-205ENST00000421625 MTURNQ8N3F0 131 aa16.48■□□□□ 0.23
USP48-205ENST00000421625 ATRXP46100 2492 aa16.48■□□□□ 0.23
USP48-205ENST00000421625 IGLV2-18A0A075B6J9 118 aa16.47■□□□□ 0.23
USP48-205ENST00000421625 TMEM238LA0A1B0GVL6 79 aa16.47■□□□□ 0.23
USP48-205ENST00000421625 VSTM5A8MXK1 200 aa16.47■□□□□ 0.23
USP48-205ENST00000421625 ATP5LO75964 103 aa16.47■□□□□ 0.23
USP48-205ENST00000421625 TRGV3P03979 118 aa16.47■□□□□ 0.23
USP48-205ENST00000421625 FOXI2Q6ZQN5 318 aa16.47■□□□□ 0.23
USP48-205ENST00000421625 ZNF479Q96JC4 524 aa16.47■□□□□ 0.23
USP48-205ENST00000421625 C21orf62Q9NYP8 219 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms