RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 OR5B12Q96R08 314 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 TCEAL7Q9BRU2 100 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 CHRDL1Q9BU40 450 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 Q9H3A6 140 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF702PQ9H963 129 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 OTORQ9NRC9 128 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 SMCO4Q9NRQ5 59 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 MRPL27Q9P0M9 148 aaKnown RBP2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 TMEM14CQ9P0S9 112 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 KLK9Q9UKQ9 250 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 PRELID1Q9Y255 219 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 DOPEY2Q9Y3R5 2298 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 WNK2Q9Y3S1 2297 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 PLXNB1O43157 2135 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 ANKRD17O75179 2603 aaKnown RBP2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 LRBAP50851 2863 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 FAM208BQ5VWN6 2430 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF320A2RRD8 509 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 PGPA6NDG6 321 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 HELTA6NFD8 242 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 C9JCJ5 164 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 H3BTX0 84 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 H7BYZ3 331 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 NDUFA4O00483 81 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF207O43670 478 aaKnown RBP2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 GGCTO75223 188 aaKnown RBP2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGHG4P01861 327 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 MT-ND4LP03901 98 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 CTSGP08311 255 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 SNRPCP09234 159 aaKnown RBP2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 LGALS1P09382 135 aaKnown RBP2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 MGST1P10620 155 aaKnown RBP2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 NPPCP23582 126 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 S100PP25815 95 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 CRYBB3P26998 211 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 CSN1S1P47710 185 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 GNG4P50150 75 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 RPL23P62829 140 aaKnown RBP2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 GNG5P63218 68 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 PSG9Q00887 426 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 RPEL1Q2QD12 228 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 CENPWQ5EE01 88 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 KCNIP4Q6PIL6 250 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 TOMM20LQ6UXN7 152 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 C15orf54Q8N8G6 183 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 HIST1H2BAQ96A08 127 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 SGK494Q96LW2 274 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 GPR82Q96P67 336 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 SLC50A1Q9BRV3 221 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 ATG101Q9BSB4 218 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 DERL1Q9BUN8 251 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 PEF1Q9UBV8 284 aaKnown RBP2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 RELNP78509 3460 aa2.86□□□□□ -1.95
HMGB3P20-201ENST00000417997 TRBV19A0A075B6N1 114 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 A0A087WWC5 75 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGHV3-49A0A0A0MS15 119 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGHV3-66A0A0C4DH42 116 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 SERTM2A0A1B0GWG4 89 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 CLDN34H7C241 214 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 DNASE2O00115 360 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 PPP1R2P9O14990 202 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF253O75346 499 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 LY6G6DO95868 133 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 TRBV12-3P01733 135 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 S100A9P06702 114 aaKnown RBP2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGLC2P0DOY2 106 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 CD99P14209 185 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 GATA1P15976 413 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 PSMB8P28062 276 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 RPL35P42766 123 aaKnown RBP2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 MEOX2P50222 304 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 TAS2R60P59551 318 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 RPL19P84098 196 aaKnown RBP2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 PDE6HQ13956 83 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 RNF212Q495C1 297 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 FAM106AQ4KMX7 169 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 C1orf194Q5T5A4 169 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF343Q6P1L6 599 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 SIGLEC15Q6ZMC9 328 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 LINC01551Q86U37 167 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 LYPD1Q8N2G4 141 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 EXOC3-AS1Q8N2X6 119 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 KLHDC1Q8N7A1 406 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 ISOC2Q96AB3 205 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 FMC1Q96HJ9 113 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 BIN3Q9NQY0 253 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF586Q9NXT0 402 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 EPDR1Q9UM22 224 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 UFC1Q9Y3C8 167 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 LY96Q9Y6Y9 160 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 AKAP6Q13023 2319 aa2.85□□□□□ -1.95
HMGB3P20-201ENST00000417997 DCHS2Q6V1P9 2916 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 CFAP46Q8IYW2 2715 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGHV3OR16-13A0A075B7E8 117 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 A0A087X0K7 114 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGHV3-74A0A0B4J1X5 117 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 TRAV34A0A0B4J273 112 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 FBLL1A6NHQ2 334 aaKnown RBP2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 SLC17A3O00476 420 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms