RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 FOXA3P55318 350 aaPredicted RBP11.8□□□□□ -0.52
LRCH3-202ENST00000414675 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
LRCH3-202ENST00000414675 UNQ9165/PRO28630Q6UXU0 137 aa11.8□□□□□ -0.52
LRCH3-202ENST00000414675 NIT1Q86X76 327 aa11.8□□□□□ -0.52
LRCH3-202ENST00000414675 PRR25Q96S07 402 aa11.8□□□□□ -0.52
LRCH3-202ENST00000414675 ALKBH7Q9BT30 221 aaPredicted RBP11.8□□□□□ -0.52
LRCH3-202ENST00000414675 SH2D1AO60880 128 aa11.8□□□□□ -0.52
LRCH3-202ENST00000414675 KLF5Q13887 457 aaPredicted RBP11.8□□□□□ -0.52
LRCH3-202ENST00000414675 TMEM95Q3KNT9 176 aa11.8□□□□□ -0.52
LRCH3-202ENST00000414675 ATP6V0BQ99437 205 aa11.8□□□□□ -0.52
LRCH3-202ENST00000414675 MIEN1Q9BRT3 115 aa11.8□□□□□ -0.52
LRCH3-202ENST00000414675 TRAV8-2A0A0B4J237 113 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 C3orf79P0CE67 100 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 PF4V1P10720 104 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
LRCH3-202ENST00000414675 SSTP61278 116 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 ERCC8Q13216 396 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 CREBBPQ92793 2442 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 M0R2Z0 102 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 ARMS2P0C7Q2 107 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 CT45A10P0DMU9 189 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 Q8N976 141 aa11.79□□□□□ -0.52
LRCH3-202ENST00000414675 TMSB15BA0A087X1C1 80 aa11.78□□□□□ -0.52
LRCH3-202ENST00000414675 HAX1O00165 279 aa11.78□□□□□ -0.52
LRCH3-202ENST00000414675 BRI3O95415 125 aa11.78□□□□□ -0.52
LRCH3-202ENST00000414675 CFHR3Q02985 330 aa11.78□□□□□ -0.52
LRCH3-202ENST00000414675 APCP25054 2843 aa11.78□□□□□ -0.52
LRCH3-202ENST00000414675 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.52
LRCH3-202ENST00000414675 H3BUA1 57 aa11.77□□□□□ -0.52
LRCH3-202ENST00000414675 IGLV1-40P01703 118 aa11.77□□□□□ -0.52
LRCH3-202ENST00000414675 RAB4AP20338 218 aa11.77□□□□□ -0.52
LRCH3-202ENST00000414675 LOXL1Q08397 574 aaPredicted RBP11.77□□□□□ -0.52
LRCH3-202ENST00000414675 DOPEY2Q9Y3R5 2298 aa11.77□□□□□ -0.52
LRCH3-202ENST00000414675 MXRA5Q9NR99 2828 aa11.77□□□□□ -0.53
LRCH3-202ENST00000414675 NBPF19A0A087WUL8 3843 aa11.77□□□□□ -0.53
LRCH3-202ENST00000414675 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
LRCH3-202ENST00000414675 PLA2G2AP14555 144 aa11.77□□□□□ -0.53
LRCH3-202ENST00000414675 SPATA45Q537H7 98 aa11.77□□□□□ -0.53
LRCH3-202ENST00000414675 SAPCD1Q5SSQ6 148 aa11.77□□□□□ -0.53
LRCH3-202ENST00000414675 FAM162BQ5T6X4 162 aa11.77□□□□□ -0.53
LRCH3-202ENST00000414675 C8orf86Q6ZUL3 223 aa11.77□□□□□ -0.53
LRCH3-202ENST00000414675 IGHV4-31P0DP07 118 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 NUTF2P61970 127 aaKnown RBP11.76□□□□□ -0.53
LRCH3-202ENST00000414675 GLMPQ8WWB7 406 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 USMG5Q96IX5 58 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 SLC50A1Q9BRV3 221 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 TEX15Q9BXT5 2789 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 A0A1B0GUT8 65 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 J3QLI3 93 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 ZNF575Q86XF7 245 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 OR4X2Q8NGF9 303 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 TPPP3Q9BW30 176 aa11.76□□□□□ -0.53
LRCH3-202ENST00000414675 TMEM189A5PLL7 270 aa11.75□□□□□ -0.53
LRCH3-202ENST00000414675 DEFB113Q30KQ7 82 aa11.75□□□□□ -0.53
LRCH3-202ENST00000414675 FAM181BA6NEQ2 426 aa11.75□□□□□ -0.53
LRCH3-202ENST00000414675 FBLL1A6NHQ2 334 aaKnown RBP11.75□□□□□ -0.53
LRCH3-202ENST00000414675 NDUFA4O00483 81 aa11.75□□□□□ -0.53
LRCH3-202ENST00000414675 Q5PR19 223 aa11.75□□□□□ -0.53
LRCH3-202ENST00000414675 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
LRCH3-202ENST00000414675 PRRC2AP48634 2157 aaKnown RBP11.74□□□□□ -0.53
LRCH3-202ENST00000414675 LOC102724200A0A096LPH7 203 aaPredicted RBP11.74□□□□□ -0.53
LRCH3-202ENST00000414675 M0QZ24 198 aa11.74□□□□□ -0.53
LRCH3-202ENST00000414675 FSHBP01225 129 aa11.74□□□□□ -0.53
LRCH3-202ENST00000414675 MRPL52Q86TS9 123 aaKnown RBP11.74□□□□□ -0.53
LRCH3-202ENST00000414675 PSMG3-AS1Q96PY0 264 aa11.74□□□□□ -0.53
LRCH3-202ENST00000414675 TCAPO15273 167 aa11.74□□□□□ -0.53
LRCH3-202ENST00000414675 LYZL1Q6UWQ5 148 aa11.74□□□□□ -0.53
LRCH3-202ENST00000414675 IL17RELQ6ZVW7 336 aa11.74□□□□□ -0.53
LRCH3-202ENST00000414675 GPHB5Q86YW7 130 aa11.74□□□□□ -0.53
LRCH3-202ENST00000414675 AGPAT4-IT1Q9H0P7 198 aa11.74□□□□□ -0.53
LRCH3-202ENST00000414675 J3QKU1 62 aa11.73□□□□□ -0.53
LRCH3-202ENST00000414675 RIGQ13278 110 aa11.73□□□□□ -0.53
LRCH3-202ENST00000414675 BEX4Q9NWD9 120 aaPredicted RBP11.73□□□□□ -0.53
LRCH3-202ENST00000414675 MUC21A0A0G2JKD1 596 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 MUC21A0A140T8X8 626 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 RBAKDNA6NC62 111 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 BTF3P20290 206 aaKnown RBP11.72□□□□□ -0.53
LRCH3-202ENST00000414675 CTRLP40313 264 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 PMCHL1Q16048 86 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 MUC21Q5SSG8 566 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 ATOH7Q8N100 152 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 C20orf173Q96LM9 149 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 ZNF469Q96JG9 3925 aaPredicted RBP11.72□□□□□ -0.53
LRCH3-202ENST00000414675 TLN2Q9Y4G6 2542 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 KRTAP1-3Q8IUG1 177 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 GATD1Q8NB37 220 aa11.72□□□□□ -0.53
LRCH3-202ENST00000414675 TMEM213A2RRL7 107 aa11.71□□□□□ -0.53
LRCH3-202ENST00000414675 BATFQ16520 125 aa11.71□□□□□ -0.53
LRCH3-202ENST00000414675 Q6AWC8 147 aa11.71□□□□□ -0.53
LRCH3-202ENST00000414675 EBLN2Q6P2I7 272 aa11.71□□□□□ -0.53
LRCH3-202ENST00000414675 NDFIP1Q9BT67 221 aa11.71□□□□□ -0.53
LRCH3-202ENST00000414675 NPFFR1Q9GZQ6 430 aa11.71□□□□□ -0.53
LRCH3-202ENST00000414675 SELENOKQ9Y6D0 94 aa11.71□□□□□ -0.53
LRCH3-202ENST00000414675 A0A0G2JLM5 398 aa11.71□□□□□ -0.54
LRCH3-202ENST00000414675 EDN2P20800 178 aa11.71□□□□□ -0.54
LRCH3-202ENST00000414675 PSMB8P28062 276 aa11.71□□□□□ -0.54
LRCH3-202ENST00000414675 KLHDC1Q8N7A1 406 aa11.71□□□□□ -0.54
LRCH3-202ENST00000414675 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms