RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ARL6IP6Q8N6S5 226 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 C16orf74Q96GX8 76 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 HYLS1Q96M11 299 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 AGPAT4-IT1Q9H0P7 198 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 SH3BGRL3Q9H299 93 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 TRBV7-9A0A0J9YWB2 115 aa10.57□□□□□ -0.72
CHD1-202ENST00000414220 ZNF705GA8MUZ8 300 aaPredicted RBP10.57□□□□□ -0.72
CHD1-202ENST00000414220 J3KRW8 73 aa10.57□□□□□ -0.72
CHD1-202ENST00000414220 GPX1P07203 203 aa10.57□□□□□ -0.72
CHD1-202ENST00000414220 ARL14EPLP0DKL9 152 aa10.57□□□□□ -0.72
CHD1-202ENST00000414220 ERCC8Q13216 396 aa10.57□□□□□ -0.72
CHD1-202ENST00000414220 IQCF2Q8IXL9 164 aa10.57□□□□□ -0.72
CHD1-202ENST00000414220 YTHDF2Q9Y5A9 579 aaKnown RBP10.57□□□□□ -0.72
CHD1-202ENST00000414220 IGKV2-40A0A087WW87 121 aaPredicted RBP10.56□□□□□ -0.72
CHD1-202ENST00000414220 LCE6AA0A183 80 aa10.56□□□□□ -0.72
CHD1-202ENST00000414220 CTXND1A0A1B0GTU2 59 aa10.56□□□□□ -0.72
CHD1-202ENST00000414220 K7EQM0 130 aa10.56□□□□□ -0.72
CHD1-202ENST00000414220 IGKV2D-40P01614 121 aaPredicted RBP10.56□□□□□ -0.72
CHD1-202ENST00000414220 ZNF138P52744 262 aa10.56□□□□□ -0.72
CHD1-202ENST00000414220 FAM222AQ5U5X8 452 aa10.56□□□□□ -0.72
CHD1-202ENST00000414220 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
CHD1-202ENST00000414220 PYGO2Q9BRQ0 406 aa10.56□□□□□ -0.72
CHD1-202ENST00000414220 ZNF492Q9P255 531 aa10.56□□□□□ -0.72
CHD1-202ENST00000414220 DKK2Q9UBU2 259 aa10.56□□□□□ -0.72
CHD1-202ENST00000414220 DEFB131BA0A096LNP1 70 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 TRAV12-3A0A0B4J271 114 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 SERTM2A0A1B0GWG4 89 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 C7orf71A4D174 169 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 LYRM9A8MSI8 78 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 DIRC3C9JPN6 131 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 EIF3GO75821 320 aaKnown RBP eCLIP10.55□□□□□ -0.72
CHD1-202ENST00000414220 GCHFRP30047 84 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 Q6ZNX1 250 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 Q6ZTC4 211 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 STOML3Q8TAV4 291 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 TMEM263Q8WUH6 116 aaKnown RBP10.55□□□□□ -0.72
CHD1-202ENST00000414220 ST6GAL2Q96JF0 529 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 ZNF471Q9BX82 626 aaPredicted RBP10.55□□□□□ -0.72
CHD1-202ENST00000414220 CYTL1Q9NRR1 136 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 CELA1Q9UNI1 258 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 LENEPQ9Y5L5 61 aa10.55□□□□□ -0.72
CHD1-202ENST00000414220 IGLL5B9A064 214 aa10.54□□□□□ -0.72
CHD1-202ENST00000414220 BCL2L11O43521 198 aa10.54□□□□□ -0.72
CHD1-202ENST00000414220 CRISP2P16562 243 aa10.54□□□□□ -0.72
CHD1-202ENST00000414220 RNASE4P34096 147 aaKnown RBP10.54□□□□□ -0.72
CHD1-202ENST00000414220 DAD1P61803 113 aa10.54□□□□□ -0.72
CHD1-202ENST00000414220 C12orf74Q32Q52 190 aa10.54□□□□□ -0.72
CHD1-202ENST00000414220 TMED6Q8WW62 240 aa10.54□□□□□ -0.72
CHD1-202ENST00000414220 VGLL1Q99990 258 aa10.54□□□□□ -0.72
CHD1-202ENST00000414220 RPH3ALQ9UNE2 315 aa10.54□□□□□ -0.72
CHD1-202ENST00000414220 TIMM8BQ9Y5J9 83 aaPredicted RBP10.54□□□□□ -0.72
CHD1-202ENST00000414220 SNURFLB1AK76 121 aa10.53□□□□□ -0.72
CHD1-202ENST00000414220 KLLNB2CW77 178 aa10.53□□□□□ -0.72
CHD1-202ENST00000414220 UMAD1C9J7I0 102 aa10.53□□□□□ -0.72
CHD1-202ENST00000414220 SEC11BP0C7V7 166 aa10.53□□□□□ -0.72
CHD1-202ENST00000414220 EIF5AL1Q6IS14 154 aaKnown RBP10.53□□□□□ -0.72
CHD1-202ENST00000414220 ZNF767PQ75MW2 155 aa10.53□□□□□ -0.72
CHD1-202ENST00000414220 TCTE3Q8IZS6 198 aa10.53□□□□□ -0.72
CHD1-202ENST00000414220 OR11H4Q8NGC9 324 aa10.53□□□□□ -0.72
CHD1-202ENST00000414220 NKX6-2Q9C056 277 aaPredicted RBP10.53□□□□□ -0.72
CHD1-202ENST00000414220 A0A1W2PRE2 83 aa10.52□□□□□ -0.73
CHD1-202ENST00000414220 TPT1P13693 172 aaKnown RBP10.52□□□□□ -0.73
CHD1-202ENST00000414220 KIR3DS1Q14943 382 aa10.52□□□□□ -0.73
CHD1-202ENST00000414220 TMUB2Q71RG4 321 aa10.52□□□□□ -0.73
CHD1-202ENST00000414220 C5orf17Q8NAS9 161 aa10.52□□□□□ -0.73
CHD1-202ENST00000414220 ZNF680Q8NEM1 530 aa10.52□□□□□ -0.73
CHD1-202ENST00000414220 SUN5Q8TC36 379 aa10.52□□□□□ -0.73
CHD1-202ENST00000414220 FAM19A4Q96LR4 140 aa10.52□□□□□ -0.73
CHD1-202ENST00000414220 NDFIP1Q9BT67 221 aa10.52□□□□□ -0.73
CHD1-202ENST00000414220 DNAH7Q8WXX0 4024 aa10.52□□□□□ -0.73
CHD1-202ENST00000414220 FBLL1A6NHQ2 334 aaKnown RBP10.51□□□□□ -0.73
CHD1-202ENST00000414220 CBY3A6NI87 242 aa10.51□□□□□ -0.73
CHD1-202ENST00000414220 RGS13O14921 159 aa10.51□□□□□ -0.73
CHD1-202ENST00000414220 AZU1P20160 251 aa10.51□□□□□ -0.73
CHD1-202ENST00000414220 SUMO1P63165 101 aaKnown RBP10.51□□□□□ -0.73
CHD1-202ENST00000414220 GOLT1AQ6ZVE7 132 aa10.51□□□□□ -0.73
CHD1-202ENST00000414220 EIF4E3Q8N5X7 224 aaKnown RBP10.51□□□□□ -0.73
CHD1-202ENST00000414220 FAM210BQ96KR6 192 aa10.51□□□□□ -0.73
CHD1-202ENST00000414220 MAP1LC3B2A6NCE7 125 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 LY6G6CO95867 125 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 PRM2P04554 102 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 CD300CQ08708 224 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 BTN1A1Q13410 526 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 DPPA3Q6W0C5 159 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 AKAP14Q86UN6 197 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 Q8TAT8 98 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 RNASE8Q8TDE3 154 aaKnown RBP10.5□□□□□ -0.73
CHD1-202ENST00000414220 LINC00467Q9BRT7 94 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 NDUFAF3Q9BU61 184 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 MAP1LC3BQ9GZQ8 125 aa10.5□□□□□ -0.73
CHD1-202ENST00000414220 ZNF324O75467 553 aaPredicted RBP10.49□□□□□ -0.73
CHD1-202ENST00000414220 IFNA7P01567 189 aa10.49□□□□□ -0.73
CHD1-202ENST00000414220 C1QBP02746 253 aa10.49□□□□□ -0.73
CHD1-202ENST00000414220 TCRAP04437 139 aa10.49□□□□□ -0.73
CHD1-202ENST00000414220 DEFB130BP0DP73 79 aa10.49□□□□□ -0.73
CHD1-202ENST00000414220 DEFB130AP0DP74 79 aa10.49□□□□□ -0.73
CHD1-202ENST00000414220 HTN3P15516 51 aa10.49□□□□□ -0.73
CHD1-202ENST00000414220 PPT1P50897 306 aa10.49□□□□□ -0.73
CHD1-202ENST00000414220 ZFAND2AQ8N6M9 145 aa10.49□□□□□ -0.73
CHD1-202ENST00000414220 NOP10Q9NPE3 64 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms