RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 VMA21Q3ZAQ7 101 aa13.13□□□□□ -0.31
GCFC2-202ENST00000409857 C5orf56Q8N8D9 126 aa13.13□□□□□ -0.31
GCFC2-202ENST00000409857 CRYGCP07315 174 aa13.12□□□□□ -0.31
GCFC2-202ENST00000409857 Q8N9W7 124 aa13.12□□□□□ -0.31
GCFC2-202ENST00000409857 STXBP6Q8NFX7 210 aa13.12□□□□□ -0.31
GCFC2-202ENST00000409857 NPFFR1Q9GZQ6 430 aa13.12□□□□□ -0.31
GCFC2-202ENST00000409857 H0Y8G0 127 aa13.12□□□□□ -0.31
GCFC2-202ENST00000409857 SYS1-DBNDD2H3BUS1 97 aa13.12□□□□□ -0.31
GCFC2-202ENST00000409857 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
GCFC2-202ENST00000409857 ZNF738Q8NE65 137 aa13.12□□□□□ -0.31
GCFC2-202ENST00000409857 FMC1Q96HJ9 113 aa13.12□□□□□ -0.31
GCFC2-202ENST00000409857 TIMM8BQ9Y5J9 83 aaPredicted RBP13.12□□□□□ -0.31
GCFC2-202ENST00000409857 NCBP2LA6PVI3 153 aaKnown RBP13.11□□□□□ -0.31
GCFC2-202ENST00000409857 UBE2V1Q13404 147 aa13.11□□□□□ -0.31
GCFC2-202ENST00000409857 EXOC3-AS1Q8N2X6 119 aa13.11□□□□□ -0.31
GCFC2-202ENST00000409857 DAZAP1Q96EP5 407 aaKnown RBP13.11□□□□□ -0.31
GCFC2-202ENST00000409857 LEPROTL1O95214 131 aa13.11□□□□□ -0.31
GCFC2-202ENST00000409857 MPV17L2Q567V2 206 aa13.11□□□□□ -0.31
GCFC2-202ENST00000409857 TRGV9Q99603 122 aa13.11□□□□□ -0.31
GCFC2-202ENST00000409857 CRYGBP07316 175 aa13.1□□□□□ -0.31
GCFC2-202ENST00000409857 C5orf64Q2M2E5 130 aa13.1□□□□□ -0.31
GCFC2-202ENST00000409857 RBPMS2Q6ZRY4 209 aaKnown RBP13.1□□□□□ -0.31
GCFC2-202ENST00000409857 Q8N2B8 174 aa13.1□□□□□ -0.31
GCFC2-202ENST00000409857 TEX45Q8NA69 505 aa13.1□□□□□ -0.31
GCFC2-202ENST00000409857 NDUFA7O95182 113 aa13.1□□□□□ -0.31
GCFC2-202ENST00000409857 RIPPLY3P57055 190 aa13.1□□□□□ -0.31
GCFC2-202ENST00000409857 SMIM12Q96EX1 92 aa13.1□□□□□ -0.31
GCFC2-202ENST00000409857 RASL11BQ9BPW5 248 aa13.1□□□□□ -0.31
GCFC2-202ENST00000409857 PMCHL2Q9BQD1 86 aa13.1□□□□□ -0.31
GCFC2-202ENST00000409857 JMJD1CQ15652 2540 aa13.1□□□□□ -0.31
GCFC2-202ENST00000409857 CRXO43186 299 aaPredicted RBP13.09□□□□□ -0.31
GCFC2-202ENST00000409857 CSN3P07498 182 aa13.09□□□□□ -0.31
GCFC2-202ENST00000409857 RPL27AP46776 148 aaKnown RBP13.09□□□□□ -0.31
GCFC2-202ENST00000409857 LYZP61626 148 aa13.09□□□□□ -0.31
GCFC2-202ENST00000409857 PRNTQ86SH4 94 aa13.09□□□□□ -0.31
GCFC2-202ENST00000409857 TMEM116Q8NCL8 245 aa13.09□□□□□ -0.31
GCFC2-202ENST00000409857 LOC102724200A0A096LPH7 203 aaPredicted RBP13.09□□□□□ -0.31
GCFC2-202ENST00000409857 CHEK1O14757 476 aa13.09□□□□□ -0.31
GCFC2-202ENST00000409857 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
GCFC2-202ENST00000409857 ZNF492Q9P255 531 aa13.09□□□□□ -0.31
GCFC2-202ENST00000409857 HLA-DRB1P01911 266 aa13.08□□□□□ -0.32
GCFC2-202ENST00000409857 PSG1P11464 419 aa13.08□□□□□ -0.32
GCFC2-202ENST00000409857 CT83Q5H943 113 aa13.08□□□□□ -0.32
GCFC2-202ENST00000409857 Q86TA4 180 aa13.08□□□□□ -0.32
GCFC2-202ENST00000409857 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.32
GCFC2-202ENST00000409857 C16orf95Q9H693 158 aa13.08□□□□□ -0.32
GCFC2-202ENST00000409857 SIGLEC9Q9Y336 463 aa13.08□□□□□ -0.32
GCFC2-202ENST00000409857 BLCAPP62952 87 aa13.08□□□□□ -0.32
GCFC2-202ENST00000409857 FBXL15Q9H469 300 aa13.08□□□□□ -0.32
GCFC2-202ENST00000409857 C2CD3Q4AC94 2353 aa13.07□□□□□ -0.32
GCFC2-202ENST00000409857 ZNF785A8K8V0 405 aa13.07□□□□□ -0.32
GCFC2-202ENST00000409857 IGLV2-11P01706 119 aa13.07□□□□□ -0.32
GCFC2-202ENST00000409857 SRSF2Q01130 221 aaKnown RBP13.07□□□□□ -0.32
GCFC2-202ENST00000409857 PPP1R27Q86WC6 154 aa13.07□□□□□ -0.32
GCFC2-202ENST00000409857 C17orf77Q96MU5 243 aa13.07□□□□□ -0.32
GCFC2-202ENST00000409857 ZNF702PQ9H963 129 aa13.07□□□□□ -0.32
GCFC2-202ENST00000409857 APOHP02749 345 aaPredicted RBP13.07□□□□□ -0.32
GCFC2-202ENST00000409857 PVRIGQ6DKI7 326 aa13.07□□□□□ -0.32
GCFC2-202ENST00000409857 Q6ZSV7 163 aa13.07□□□□□ -0.32
GCFC2-202ENST00000409857 HIGD1AQ9Y241 93 aa13.07□□□□□ -0.32
GCFC2-202ENST00000409857 NUDT3O95989 172 aa13.06□□□□□ -0.32
GCFC2-202ENST00000409857 PLGLAQ15195 96 aa13.06□□□□□ -0.32
GCFC2-202ENST00000409857 GFRA4Q9GZZ7 299 aa13.06□□□□□ -0.32
GCFC2-202ENST00000409857 ST20Q9HBF5 79 aa13.06□□□□□ -0.32
GCFC2-202ENST00000409857 NPIPB6E9PJ23 425 aa13.06□□□□□ -0.32
GCFC2-202ENST00000409857 IGHG2P01859 326 aa13.06□□□□□ -0.32
GCFC2-202ENST00000409857 FAM162BQ5T6X4 162 aa13.06□□□□□ -0.32
GCFC2-202ENST00000409857 NDFIP1Q9BT67 221 aa13.06□□□□□ -0.32
GCFC2-202ENST00000409857 SLC25A39Q9BZJ4 359 aaPredicted RBP13.06□□□□□ -0.32
GCFC2-202ENST00000409857 ZNF580Q9UK33 172 aa13.06□□□□□ -0.32
GCFC2-202ENST00000409857 TEX22C9J3V5 150 aa13.05□□□□□ -0.32
GCFC2-202ENST00000409857 PPBPP02775 128 aa13.05□□□□□ -0.32
GCFC2-202ENST00000409857 ARMS2P0C7Q2 107 aa13.05□□□□□ -0.32
GCFC2-202ENST00000409857 IGLC1P0CG04 106 aa13.05□□□□□ -0.32
GCFC2-202ENST00000409857 FOXE3Q13461 319 aa13.05□□□□□ -0.32
GCFC2-202ENST00000409857 VAMP3Q15836 100 aa13.05□□□□□ -0.32
GCFC2-202ENST00000409857 RNF151Q2KHN1 245 aa13.05□□□□□ -0.32
GCFC2-202ENST00000409857 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.05□□□□□ -0.32
GCFC2-202ENST00000409857 SVIPQ8NHG7 77 aa13.05□□□□□ -0.32
GCFC2-202ENST00000409857 ZC2HC1AQ96GY0 325 aa13.05□□□□□ -0.32
GCFC2-202ENST00000409857 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.04□□□□□ -0.32
GCFC2-202ENST00000409857 PLP1P60201 277 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 ZNF562Q6V9R5 426 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 SRSF12Q8WXF0 261 aaKnown RBP13.04□□□□□ -0.32
GCFC2-202ENST00000409857 OTORQ9NRC9 128 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 CHTOPQ9Y3Y2 248 aaKnown RBP13.04□□□□□ -0.32
GCFC2-202ENST00000409857 F11RQ9Y624 299 aaKnown RBP13.04□□□□□ -0.32
GCFC2-202ENST00000409857 IGHV7-81A0A0B4J1V7 117 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 MUC21A0A0G2JKD1 596 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 MUC21A0A140T8X8 626 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 HAX1O00165 279 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 KRTAP24-1Q3LI83 254 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 MUC21Q5SSG8 566 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 SLC25A34Q6PIV7 304 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 Q6ZS46 218 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 MAP1LC3CQ9BXW4 147 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 TMEM191AQ9H0A3 160 aa13.04□□□□□ -0.32
GCFC2-202ENST00000409857 TMEM89A2RUT3 159 aa13.03□□□□□ -0.32
GCFC2-202ENST00000409857 TAX1BP3O14907 124 aa13.03□□□□□ -0.32
GCFC2-202ENST00000409857 BVES-AS1Q5T3Y7 98 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms