RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 SMIM3Q9BZL3 60 aa13.79□□□□□ -0.2
TSPAN4-209ENST00000409543 C7orf71A4D174 169 aa13.78□□□□□ -0.2
TSPAN4-209ENST00000409543 KLLNB2CW77 178 aa13.78□□□□□ -0.2
TSPAN4-209ENST00000409543 OR10J4P0C629 311 aa13.78□□□□□ -0.2
TSPAN4-209ENST00000409543 FAM122CQ6P4D5 195 aa13.78□□□□□ -0.2
TSPAN4-209ENST00000409543 LINC00336Q6ZUF6 198 aa13.78□□□□□ -0.2
TSPAN4-209ENST00000409543 ALG5Q9Y673 324 aa13.78□□□□□ -0.2
TSPAN4-209ENST00000409543 IGKV2-40A0A087WW87 121 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-209ENST00000409543 SNURFLB1AK76 121 aa13.77□□□□□ -0.21
TSPAN4-209ENST00000409543 M0R2N4 97 aa13.77□□□□□ -0.21
TSPAN4-209ENST00000409543 OR7C2O60412 319 aa13.77□□□□□ -0.21
TSPAN4-209ENST00000409543 PTTG1O95997 202 aa13.77□□□□□ -0.21
TSPAN4-209ENST00000409543 IGKV2D-40P01614 121 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-209ENST00000409543 NMBP08949 121 aa13.77□□□□□ -0.21
TSPAN4-209ENST00000409543 CRISP2P16562 243 aa13.77□□□□□ -0.21
TSPAN4-209ENST00000409543 ZNF503Q96F45 646 aa13.77□□□□□ -0.21
TSPAN4-209ENST00000409543 ZNF324O75467 553 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-209ENST00000409543 FAM3BP58499 235 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-209ENST00000409543 TMEM78Q5T7P6 136 aa13.76□□□□□ -0.21
TSPAN4-209ENST00000409543 LYPD1Q8N2G4 141 aa13.76□□□□□ -0.21
TSPAN4-209ENST00000409543 PHYHIPLQ96FC7 376 aa13.76□□□□□ -0.21
TSPAN4-209ENST00000409543 VGLL1Q99990 258 aa13.76□□□□□ -0.21
TSPAN4-209ENST00000409543 LINC00467Q9BRT7 94 aa13.76□□□□□ -0.21
TSPAN4-209ENST00000409543 WFDC1Q9HC57 220 aa13.76□□□□□ -0.21
TSPAN4-209ENST00000409543 GPX1P07203 203 aa13.75□□□□□ -0.21
TSPAN4-209ENST00000409543 TAS2R45P59539 299 aa13.75□□□□□ -0.21
TSPAN4-209ENST00000409543 CD300CQ08708 224 aa13.75□□□□□ -0.21
TSPAN4-209ENST00000409543 DAZ2Q13117 558 aaKnown RBP13.75□□□□□ -0.21
TSPAN4-209ENST00000409543 BTN1A1Q13410 526 aa13.75□□□□□ -0.21
TSPAN4-209ENST00000409543 IGLV2-18A0A075B6J9 118 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 GAGE12BA1L429 117 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 GAGE7O76087 117 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 GAGE12FP0CL80 117 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 GAGE12GP0CL81 117 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 GAGE12IP0CL82 117 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 RNASE4P34096 147 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 RANP62826 216 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 UBE2L3P68036 154 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 KHDC3LQ587J8 217 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 Q6ZR54 194 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 ZFAND2AQ8N6M9 145 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 ZNF680Q8NEM1 530 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 ZNF492Q9P255 531 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 DNAH2Q9P225 4427 aa13.74□□□□□ -0.21
TSPAN4-209ENST00000409543 NACAE9PAV3 2078 aa13.73□□□□□ -0.21
TSPAN4-209ENST00000409543 TRBV7-9A0A0J9YWB2 115 aa13.73□□□□□ -0.21
TSPAN4-209ENST00000409543 NUDT3O95989 172 aa13.73□□□□□ -0.21
TSPAN4-209ENST00000409543 CSN1S1P47710 185 aa13.73□□□□□ -0.21
TSPAN4-209ENST00000409543 ZNF138P52744 262 aa13.73□□□□□ -0.21
TSPAN4-209ENST00000409543 ANXA2RQ3ZCQ2 193 aa13.73□□□□□ -0.21
TSPAN4-209ENST00000409543 EIF4E3Q8N5X7 224 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-209ENST00000409543 ATG101Q9BSB4 218 aa13.73□□□□□ -0.21
TSPAN4-209ENST00000409543 HECTD4Q9Y4D8 3996 aa13.73□□□□□ -0.21
TSPAN4-209ENST00000409543 RBAKDNA6NC62 111 aa13.72□□□□□ -0.21
TSPAN4-209ENST00000409543 ACOT6Q3I5F7 207 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-209ENST00000409543 C11orf72Q8NBR9 251 aa13.72□□□□□ -0.21
TSPAN4-209ENST00000409543 Q9H3A6 140 aa13.72□□□□□ -0.21
TSPAN4-209ENST00000409543 GSN-AS1Q9NRJ2 163 aa13.72□□□□□ -0.21
TSPAN4-209ENST00000409543 DNAH17Q9UFH2 4485 aa13.71□□□□□ -0.21
TSPAN4-209ENST00000409543 RTL8CO15255 209 aa13.71□□□□□ -0.21
TSPAN4-209ENST00000409543 M6PRP20645 277 aa13.71□□□□□ -0.21
TSPAN4-209ENST00000409543 OR5I1Q13606 314 aa13.71□□□□□ -0.21
TSPAN4-209ENST00000409543 MED28Q9H204 178 aa13.71□□□□□ -0.21
TSPAN4-209ENST00000409543 PRR9Q5T870 116 aa13.7□□□□□ -0.22
TSPAN4-209ENST00000409543 Q6ZTI0 123 aa13.7□□□□□ -0.22
TSPAN4-209ENST00000409543 RXFP4Q8TDU9 374 aa13.7□□□□□ -0.22
TSPAN4-209ENST00000409543 FAT2Q9NYQ8 4349 aa13.7□□□□□ -0.22
TSPAN4-209ENST00000409543 A0A1W2PPV4 95 aa13.69□□□□□ -0.22
TSPAN4-209ENST00000409543 HOXA5P20719 270 aa13.69□□□□□ -0.22
TSPAN4-209ENST00000409543 CCL18P55774 89 aa13.69□□□□□ -0.22
TSPAN4-209ENST00000409543 Q8TAT8 98 aa13.69□□□□□ -0.22
TSPAN4-209ENST00000409543 GNPNAT1Q96EK6 184 aaPredicted RBP13.69□□□□□ -0.22
TSPAN4-209ENST00000409543 C18orf15Q96N68 181 aa13.69□□□□□ -0.22
TSPAN4-209ENST00000409543 TRAV26-1A0A087WT03 109 aa13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 PRSS29PA6NIE9 313 aa13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 DIRC3C9JPN6 131 aa13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 RGS13O14921 159 aa13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 EIF3GO75821 320 aaKnown RBP eCLIP13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 TCL1AP56279 114 aa13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 RAB2AP61019 212 aa13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 ZNF266Q14584 549 aa13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 IBA57Q5T440 356 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 PQLC2Q6ZP29 291 aa13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 AQP10Q96PS8 301 aa13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 OTORQ9NRC9 128 aa13.68□□□□□ -0.22
TSPAN4-209ENST00000409543 IGHV1OR15-1A0A075B7D0 117 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 A0A1B0GVY2 172 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 H3BNG1 76 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 SOHLH1Q5JUK2 328 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 Q6ZQT7 251 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 OR10G4Q8NGN3 311 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 OR10G9Q8NGN4 311 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 OR10G7Q8NGN6 311 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 ZNRF2Q8NHG8 242 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 ASB13Q8WXK3 278 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 TMPRSS5Q9H3S3 457 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 KLF12Q9Y4X4 402 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 LENEPQ9Y5L5 61 aa13.67□□□□□ -0.22
TSPAN4-209ENST00000409543 TRGV2A0A075B6R0 118 aa13.66□□□□□ -0.22
TSPAN4-209ENST00000409543 TRGV1A0A0A0MS02 117 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms