RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
COL6A2-204ENST00000409416 IGLC1P0CG04 106 aa10.55□□□□□ -0.72
COL6A2-204ENST00000409416 FBN2P35556 2912 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 GAGE10A6NGK3 116 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 FSTL3O95633 263 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 MFAP4P55083 255 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 WIPF2Q8TF74 440 aaPredicted RBP10.54□□□□□ -0.72
COL6A2-204ENST00000409416 TMEM191AQ9H0A3 160 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 RASL11AQ6T310 242 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 OTORQ9NRC9 128 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 TRAV30A0A087WSZ9 112 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 C2orf70A6NJV1 201 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 SYS1-DBNDD2H3BUS1 97 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 LTAP01374 205 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 SCGB2A2Q13296 93 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 GTF2H5Q6ZYL4 71 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
COL6A2-204ENST00000409416 CHD6Q8TD26 2715 aa10.53□□□□□ -0.72
COL6A2-204ENST00000409416 A0A1B0GUT8 65 aa10.53□□□□□ -0.72
COL6A2-204ENST00000409416 IGKV1-17P01599 117 aa10.53□□□□□ -0.72
COL6A2-204ENST00000409416 FCER1GP30273 86 aa10.53□□□□□ -0.72
COL6A2-204ENST00000409416 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
COL6A2-204ENST00000409416 URB1-AS1Q96HZ7 61 aa10.53□□□□□ -0.72
COL6A2-204ENST00000409416 IGHV2-70DA0A0C4DH43 119 aa10.53□□□□□ -0.72
COL6A2-204ENST00000409416 DLX6P56179 175 aa10.53□□□□□ -0.72
COL6A2-204ENST00000409416 C5orf64Q2M2E5 130 aa10.53□□□□□ -0.72
COL6A2-204ENST00000409416 C7orf69Q9H7B7 122 aa10.53□□□□□ -0.72
COL6A2-204ENST00000409416 ATP6V0E1O15342 81 aa10.52□□□□□ -0.72
COL6A2-204ENST00000409416 MYCNOSP40205 109 aa10.52□□□□□ -0.72
COL6A2-204ENST00000409416 MRGPRG-AS1Q2M3A8 158 aa10.52□□□□□ -0.72
COL6A2-204ENST00000409416 PSG8Q9UQ74 426 aa10.52□□□□□ -0.72
COL6A2-204ENST00000409416 MSRB2Q9Y3D2 182 aa10.52□□□□□ -0.72
COL6A2-204ENST00000409416 A0A1B0GXF2 115 aa10.52□□□□□ -0.73
COL6A2-204ENST00000409416 TMEM189A5PLL7 270 aa10.52□□□□□ -0.73
COL6A2-204ENST00000409416 TEX22C9J3V5 150 aa10.52□□□□□ -0.73
COL6A2-204ENST00000409416 PPBPP02775 128 aa10.52□□□□□ -0.73
COL6A2-204ENST00000409416 A0A087X0K7 114 aa10.52□□□□□ -0.73
COL6A2-204ENST00000409416 S100A4P26447 101 aaKnown RBP10.52□□□□□ -0.73
COL6A2-204ENST00000409416 RIGQ13278 110 aa10.52□□□□□ -0.73
COL6A2-204ENST00000409416 AMN1Q8IY45 258 aa10.52□□□□□ -0.73
COL6A2-204ENST00000409416 RAB37Q96AX2 223 aa10.52□□□□□ -0.73
COL6A2-204ENST00000409416 MLST8Q9BVC4 326 aa10.52□□□□□ -0.73
COL6A2-204ENST00000409416 AP5S1Q9NUS5 200 aa10.52□□□□□ -0.73
COL6A2-204ENST00000409416 FLNAP21333 2647 aaKnown RBP10.51□□□□□ -0.73
COL6A2-204ENST00000409416 KLF5Q13887 457 aaPredicted RBP10.51□□□□□ -0.73
COL6A2-204ENST00000409416 FAM162BQ5T6X4 162 aa10.51□□□□□ -0.73
COL6A2-204ENST00000409416 SLC25A34Q6PIV7 304 aa10.51□□□□□ -0.73
COL6A2-204ENST00000409416 VGLL1Q99990 258 aa10.51□□□□□ -0.73
COL6A2-204ENST00000409416 MSRB1Q9NZV6 116 aa10.51□□□□□ -0.73
COL6A2-204ENST00000409416 THYN1Q9P016 225 aa10.51□□□□□ -0.73
COL6A2-204ENST00000409416 TRGV3P03979 118 aa10.51□□□□□ -0.73
COL6A2-204ENST00000409416 CRYGCP07315 174 aa10.51□□□□□ -0.73
COL6A2-204ENST00000409416 M0R381 172 aa10.5□□□□□ -0.73
COL6A2-204ENST00000409416 FAM106CPP0CH98 169 aa10.5□□□□□ -0.73
COL6A2-204ENST00000409416 FAM71F2Q6NXP2 309 aa10.5□□□□□ -0.73
COL6A2-204ENST00000409416 KLF12Q9Y4X4 402 aa10.5□□□□□ -0.73
COL6A2-204ENST00000409416 C19orf71A6NCJ1 209 aa10.5□□□□□ -0.73
COL6A2-204ENST00000409416 INS-IGF2F8WCM5 200 aa10.5□□□□□ -0.73
COL6A2-204ENST00000409416 IGLV1-47P01700 117 aa10.5□□□□□ -0.73
COL6A2-204ENST00000409416 PLP1P60201 277 aa10.5□□□□□ -0.73
COL6A2-204ENST00000409416 Q6ZQT7 251 aa10.5□□□□□ -0.73
COL6A2-204ENST00000409416 TMEM238LA0A1B0GVL6 79 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 F6UB75 175 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 NMUP48645 174 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 TRBV19A0A075B6N1 114 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 MGPP08493 103 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 CKS2P33552 79 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 FAM106AQ4KMX7 169 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 LYZL1Q6UWQ5 148 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 MRPL52Q86TS9 123 aaKnown RBP10.49□□□□□ -0.73
COL6A2-204ENST00000409416 HSPB8Q9UJY1 196 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 A0A1B0GV72 72 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 D6R8Y8 96 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 I3L2K1 104 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 K7EIM0 57 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 IFI27P40305 119 aaPredicted RBP10.49□□□□□ -0.73
COL6A2-204ENST00000409416 PRSS22Q9GZN4 317 aa10.49□□□□□ -0.73
COL6A2-204ENST00000409416 H3BUX3 64 aa10.48□□□□□ -0.73
COL6A2-204ENST00000409416 GATA1P15976 413 aaPredicted RBP10.48□□□□□ -0.73
COL6A2-204ENST00000409416 BSNQ9UPA5 3926 aa10.48□□□□□ -0.73
COL6A2-204ENST00000409416 PRSS1P07477 247 aa10.48□□□□□ -0.73
COL6A2-204ENST00000409416 ZNF492Q9P255 531 aa10.48□□□□□ -0.73
COL6A2-204ENST00000409416 KAAG1Q9UBP8 84 aa10.48□□□□□ -0.73
COL6A2-204ENST00000409416 HELZ2Q9BYK8 2649 aaKnown RBP10.48□□□□□ -0.73
COL6A2-204ENST00000409416 USP24Q9UPU5 2620 aa10.48□□□□□ -0.73
COL6A2-204ENST00000409416 TRAV26-2A0A0B4J265 109 aa10.48□□□□□ -0.73
COL6A2-204ENST00000409416 PRAC2D3DTV9 90 aa10.48□□□□□ -0.73
COL6A2-204ENST00000409416 K7EMI3 77 aa10.48□□□□□ -0.73
COL6A2-204ENST00000409416 CHCHD1Q96BP2 118 aaKnown RBP10.48□□□□□ -0.73
COL6A2-204ENST00000409416 SHANK2-AS3Q9BTD1 123 aa10.48□□□□□ -0.73
COL6A2-204ENST00000409416 MRPS16Q9Y3D3 137 aaKnown RBP10.48□□□□□ -0.73
COL6A2-204ENST00000409416 ITPR3Q14573 2671 aa10.47□□□□□ -0.73
COL6A2-204ENST00000409416 ZNF491Q8N8L2 437 aa10.47□□□□□ -0.73
COL6A2-204ENST00000409416 LINC00477Q96M19 166 aa10.47□□□□□ -0.73
COL6A2-204ENST00000409416 F5H697 171 aa10.47□□□□□ -0.73
COL6A2-204ENST00000409416 SMAD7O15105 426 aaKnown RBP10.47□□□□□ -0.73
COL6A2-204ENST00000409416 ARL3P36405 182 aa10.47□□□□□ -0.73
COL6A2-204ENST00000409416 PSG9Q00887 426 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms