RNA–Protein interactions for RNA: ENST00000407585.5

PACSIN2-205, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 1 (best) BASIC

Gene PACSIN2, Length 3,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-205ENST00000407585 MED13LQ71F56 2210 aa13.44□□□□□ -0.26
PACSIN2-205ENST00000407585 GATA1P15976 413 aaPredicted RBP13.44□□□□□ -0.26
PACSIN2-205ENST00000407585 C5orf64Q2M2E5 130 aa13.44□□□□□ -0.26
PACSIN2-205ENST00000407585 ARPC1AQ92747 370 aa13.44□□□□□ -0.26
PACSIN2-205ENST00000407585 TMEM190Q8WZ59 177 aa13.43□□□□□ -0.26
PACSIN2-205ENST00000407585 FABP2P12104 132 aa13.43□□□□□ -0.26
PACSIN2-205ENST00000407585 IGLV11-55A0A075B6I3 123 aa13.43□□□□□ -0.26
PACSIN2-205ENST00000407585 IGKV2D-26A0A0A0MRZ7 120 aa13.43□□□□□ -0.26
PACSIN2-205ENST00000407585 A0A1W2PPM0 123 aa13.43□□□□□ -0.26
PACSIN2-205ENST00000407585 CEACAM3P40198 252 aa13.43□□□□□ -0.26
PACSIN2-205ENST00000407585 IGHV3-66A0A0C4DH42 116 aa13.42□□□□□ -0.26
PACSIN2-205ENST00000407585 SIVA1O15304 175 aa13.42□□□□□ -0.26
PACSIN2-205ENST00000407585 ZNF672Q499Z4 452 aaPredicted RBP13.42□□□□□ -0.26
PACSIN2-205ENST00000407585 FOXC2Q99958 501 aa13.42□□□□□ -0.26
PACSIN2-205ENST00000407585 SMIM13P0DJ93 91 aa13.42□□□□□ -0.26
PACSIN2-205ENST00000407585 RPL24P83731 157 aaKnown RBP13.42□□□□□ -0.26
PACSIN2-205ENST00000407585 NDPQ00604 133 aa13.42□□□□□ -0.26
PACSIN2-205ENST00000407585 PAX8Q06710 450 aa13.42□□□□□ -0.26
PACSIN2-205ENST00000407585 GTSCR1Q86UQ5 136 aa13.42□□□□□ -0.26
PACSIN2-205ENST00000407585 ZFHX2Q9C0A1 2572 aaPredicted RBP13.42□□□□□ -0.26
PACSIN2-205ENST00000407585 SPTA1P02549 2419 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 IGHV3OR16-13A0A075B7E8 117 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 IGHV3-74A0A0B4J1X5 117 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 TNFRSF6BO95407 300 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 IGF2-ASQ6U949 168 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 FBLL1A6NHQ2 334 aaKnown RBP13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 F8W735 103 aaPredicted RBP13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 K7ERJ3 54 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 SAMD5Q5TGI4 173 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 FABP5P3A8MUU1 101 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 K7EMI3 77 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 IGLC6P0CF74 106 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 RNF182Q8N6D2 247 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 CFHR4Q92496 578 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 SMAD5-AS1Q9Y6J3 95 aa13.41□□□□□ -0.26
PACSIN2-205ENST00000407585 LRBAP50851 2863 aa13.4□□□□□ -0.26
PACSIN2-205ENST00000407585 FXYD2P54710 66 aa13.4□□□□□ -0.26
PACSIN2-205ENST00000407585 TMEM158Q8WZ71 300 aa13.4□□□□□ -0.26
PACSIN2-205ENST00000407585 RNF185Q96GF1 192 aa13.4□□□□□ -0.26
PACSIN2-205ENST00000407585 FAM90A27PA6NNH2 459 aa13.4□□□□□ -0.26
PACSIN2-205ENST00000407585 DYNAPQ8N1N2 210 aa13.4□□□□□ -0.26
PACSIN2-205ENST00000407585 TMEM160Q9NX00 188 aa13.4□□□□□ -0.26
PACSIN2-205ENST00000407585 NBASA2RRP1 2371 aa13.4□□□□□ -0.27
PACSIN2-205ENST00000407585 PRAC2D3DTV9 90 aa13.39□□□□□ -0.27
PACSIN2-205ENST00000407585 TMEM11P17152 192 aa13.39□□□□□ -0.27
PACSIN2-205ENST00000407585 FCER1GP30273 86 aa13.39□□□□□ -0.27
PACSIN2-205ENST00000407585 ODF1Q14990 250 aa13.39□□□□□ -0.27
PACSIN2-205ENST00000407585 ZNF562Q6V9R5 426 aa13.39□□□□□ -0.27
PACSIN2-205ENST00000407585 G3V4G9 280 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 NDUFA3O95167 84 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 IGKCP01834 107 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 CTSGP08311 255 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 Q8NA96 180 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 NPBQ8NG41 125 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 CHAC1Q9BUX1 264 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 SCGB2A1O75556 95 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 ZC2HC1BQ5TFG8 222 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 NHP2Q9NX24 153 aaKnown RBP13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 UFC1Q9Y3C8 167 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 ANKHD1Q8IWZ3 2542 aaKnown RBP13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 IGHV3-49A0A0A0MS15 119 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 IL17RELQ6ZVW7 336 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 OR5A1Q8NGJ0 315 aa13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 NXT2Q9NPJ8 142 aaKnown RBP13.38□□□□□ -0.27
PACSIN2-205ENST00000407585 IGHG4P01861 327 aa13.37□□□□□ -0.27
PACSIN2-205ENST00000407585 PTPRZ1P23471 2315 aaPredicted RBP13.37□□□□□ -0.27
PACSIN2-205ENST00000407585 TMEM8BA6NDV4 472 aa13.36□□□□□ -0.27
PACSIN2-205ENST00000407585 GRNP28799 593 aaKnown RBP13.36□□□□□ -0.27
PACSIN2-205ENST00000407585 DTX2Q86UW9 622 aa13.36□□□□□ -0.27
PACSIN2-205ENST00000407585 NPFFR1Q9GZQ6 430 aa13.36□□□□□ -0.27
PACSIN2-205ENST00000407585 OR11H6Q8NGC7 330 aa13.36□□□□□ -0.27
PACSIN2-205ENST00000407585 TRAV26-2A0A0B4J265 109 aa13.36□□□□□ -0.27
PACSIN2-205ENST00000407585 ECSCRQ19T08 205 aa13.36□□□□□ -0.27
PACSIN2-205ENST00000407585 TTC9CQ8N5M4 171 aa13.36□□□□□ -0.27
PACSIN2-205ENST00000407585 HHLA3Q9XRX5 114 aa13.36□□□□□ -0.27
PACSIN2-205ENST00000407585 TRAV40A0A0B4J280 105 aa13.35□□□□□ -0.27
PACSIN2-205ENST00000407585 TRBV25-1A0A075B6N4 114 aa13.35□□□□□ -0.27
PACSIN2-205ENST00000407585 DPM2O94777 84 aa13.35□□□□□ -0.27
PACSIN2-205ENST00000407585 TRGV3P03979 118 aa13.35□□□□□ -0.27
PACSIN2-205ENST00000407585 ZNF575Q86XF7 245 aa13.35□□□□□ -0.27
PACSIN2-205ENST00000407585 TIMD4Q96H15 378 aa13.35□□□□□ -0.27
PACSIN2-205ENST00000407585 TLN1Q9Y490 2541 aaKnown RBP13.34□□□□□ -0.27
PACSIN2-205ENST00000407585 ZNF207O43670 478 aaKnown RBP13.34□□□□□ -0.27
PACSIN2-205ENST00000407585 SMIM17P0DL12 118 aa13.34□□□□□ -0.27
PACSIN2-205ENST00000407585 COX8CQ7Z4L0 72 aa13.34□□□□□ -0.27
PACSIN2-205ENST00000407585 LY6G5BQ8NDX9 201 aa13.34□□□□□ -0.27
PACSIN2-205ENST00000407585 SPOCK3Q9BQ16 436 aa13.34□□□□□ -0.27
PACSIN2-205ENST00000407585 NEGR1Q7Z3B1 354 aa13.34□□□□□ -0.27
PACSIN2-205ENST00000407585 ZNF48Q96MX3 618 aaPredicted RBP13.33□□□□□ -0.27
PACSIN2-205ENST00000407585 TMEM238C9JI98 176 aa13.33□□□□□ -0.28
PACSIN2-205ENST00000407585 CLEC3BP05452 202 aa13.33□□□□□ -0.28
PACSIN2-205ENST00000407585 C15orf32Q32M92 178 aa13.33□□□□□ -0.28
PACSIN2-205ENST00000407585 MYOZ3Q8TDC0 251 aa13.33□□□□□ -0.28
PACSIN2-205ENST00000407585 MRPL35Q9NZE8 188 aaKnown RBP13.33□□□□□ -0.28
PACSIN2-205ENST00000407585 DCHS2Q6V1P9 2916 aa13.32□□□□□ -0.28
PACSIN2-205ENST00000407585 VMO1Q7Z5L0 202 aa13.32□□□□□ -0.28
PACSIN2-205ENST00000407585 J3KRW8 73 aa13.32□□□□□ -0.28
PACSIN2-205ENST00000407585 ATP5LO75964 103 aa13.31□□□□□ -0.28
PACSIN2-205ENST00000407585 PRTN3P24158 256 aa13.31□□□□□ -0.28
PACSIN2-205ENST00000407585 Q8N8P6 123 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms