RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 FOXE3Q13461 319 aa19.84■□□□□ 0.77
COL13A1-203ENST00000398969 SMKR1H3BMG3 65 aa19.83■□□□□ 0.77
COL13A1-203ENST00000398969 CKS2P33552 79 aa19.83■□□□□ 0.77
COL13A1-203ENST00000398969 Q8N9W7 124 aa19.83■□□□□ 0.77
COL13A1-203ENST00000398969 RNASE8Q8TDE3 154 aaKnown RBP19.83■□□□□ 0.77
COL13A1-203ENST00000398969 IGHV3-35A0A0C4DH35 117 aa19.83■□□□□ 0.76
COL13A1-203ENST00000398969 NPYP01303 97 aa19.83■□□□□ 0.76
COL13A1-203ENST00000398969 FXYD7P58549 80 aa19.83■□□□□ 0.76
COL13A1-203ENST00000398969 LGALS9BQ3B8N2 356 aa19.83■□□□□ 0.76
COL13A1-203ENST00000398969 LGALS9CQ6DKI2 356 aa19.83■□□□□ 0.76
COL13A1-203ENST00000398969 DTX2Q86UW9 622 aa19.83■□□□□ 0.76
COL13A1-203ENST00000398969 OR4C5Q8NGB2 326 aa19.83■□□□□ 0.76
COL13A1-203ENST00000398969 DPF1Q92782 380 aa19.83■□□□□ 0.76
COL13A1-203ENST00000398969 K7EP13 123 aa19.82■□□□□ 0.76
COL13A1-203ENST00000398969 HBDP02042 147 aa19.82■□□□□ 0.76
COL13A1-203ENST00000398969 ANKRD39Q53RE8 183 aa19.82■□□□□ 0.76
COL13A1-203ENST00000398969 ACACBO00763 2458 aa19.81■□□□□ 0.76
COL13A1-203ENST00000398969 CSMD1Q96PZ7 3565 aa19.81■□□□□ 0.76
COL13A1-203ENST00000398969 SNAI2O43623 268 aa19.81■□□□□ 0.76
COL13A1-203ENST00000398969 SRSF2Q01130 221 aaKnown RBP19.81■□□□□ 0.76
COL13A1-203ENST00000398969 PSMG3-AS1Q96PY0 264 aa19.81■□□□□ 0.76
COL13A1-203ENST00000398969 CD5LO43866 347 aa19.81■□□□□ 0.76
COL13A1-203ENST00000398969 FGF6P10767 208 aa19.81■□□□□ 0.76
COL13A1-203ENST00000398969 S100A7P31151 101 aa19.8■□□□□ 0.76
COL13A1-203ENST00000398969 CACNG7P62955 275 aa19.8■□□□□ 0.76
COL13A1-203ENST00000398969 ZNF502Q8TBZ5 544 aa19.8■□□□□ 0.76
COL13A1-203ENST00000398969 SIRPDQ9H106 197 aa19.8■□□□□ 0.76
COL13A1-203ENST00000398969 CBY3A6NI87 242 aa19.79■□□□□ 0.76
COL13A1-203ENST00000398969 C15orf32Q32M92 178 aa19.79■□□□□ 0.76
COL13A1-203ENST00000398969 FAM110DQ8TAY7 271 aaPredicted RBP19.79■□□□□ 0.76
COL13A1-203ENST00000398969 C19orf84I3L1E1 186 aa19.79■□□□□ 0.76
COL13A1-203ENST00000398969 ORM1P02763 201 aa19.79■□□□□ 0.76
COL13A1-203ENST00000398969 ZFAND3Q9H8U3 227 aa19.79■□□□□ 0.76
COL13A1-203ENST00000398969 ERCC8Q13216 396 aa19.78■□□□□ 0.76
COL13A1-203ENST00000398969 CNFNQ9BYD5 112 aa19.78■□□□□ 0.76
COL13A1-203ENST00000398969 MSRB1Q9NZV6 116 aa19.78■□□□□ 0.76
COL13A1-203ENST00000398969 OR1N2Q8NGR9 330 aa19.78■□□□□ 0.76
COL13A1-203ENST00000398969 RNF185Q96GF1 192 aa19.78■□□□□ 0.76
COL13A1-203ENST00000398969 FABP5P3A8MUU1 101 aa19.77■□□□□ 0.76
COL13A1-203ENST00000398969 PRAC2D3DTV9 90 aa19.77■□□□□ 0.76
COL13A1-203ENST00000398969 ECSCRQ19T08 205 aa19.77■□□□□ 0.75
COL13A1-203ENST00000398969 IFI27L1Q96BM0 104 aa19.77■□□□□ 0.75
COL13A1-203ENST00000398969 BUB3O43684 328 aa19.76■□□□□ 0.75
COL13A1-203ENST00000398969 PRSS57Q6UWY2 283 aa19.76■□□□□ 0.75
COL13A1-203ENST00000398969 CLEC3BP05452 202 aa19.75■□□□□ 0.75
COL13A1-203ENST00000398969 RBX1P62877 108 aa19.75■□□□□ 0.75
COL13A1-203ENST00000398969 TMEM97Q5BJF2 176 aa19.75■□□□□ 0.75
COL13A1-203ENST00000398969 RNF182Q8N6D2 247 aa19.75■□□□□ 0.75
COL13A1-203ENST00000398969 AJUBAQ96IF1 538 aa19.75■□□□□ 0.75
COL13A1-203ENST00000398969 CFAP46Q8IYW2 2715 aa19.75■□□□□ 0.75
COL13A1-203ENST00000398969 ATP6V0E1O15342 81 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 KLK9Q2XQG4 91 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 KLK9Q9UKQ9 250 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 RAB9AP51151 201 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 LINC01559Q495D7 138 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 AMMECR1LQ6DCA0 310 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 BOD1L2Q8IYS8 172 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 NPFFR1Q9GZQ6 430 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 UBTD1Q9HAC8 227 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 IGSF10Q6WRI0 2623 aa19.74■□□□□ 0.75
COL13A1-203ENST00000398969 NDUFS7O75251 213 aa19.73■□□□□ 0.75
COL13A1-203ENST00000398969 PPBPP02775 128 aa19.73■□□□□ 0.75
COL13A1-203ENST00000398969 MAP1LC3AQ9H492 121 aa19.73■□□□□ 0.75
COL13A1-203ENST00000398969 CLPSL1A2RUU4 121 aa19.72■□□□□ 0.75
COL13A1-203ENST00000398969 RBAKDNA6NC62 111 aa19.72■□□□□ 0.75
COL13A1-203ENST00000398969 GAS8-AS1O95177 125 aa19.72■□□□□ 0.75
COL13A1-203ENST00000398969 SEC11AP67812 179 aa19.72■□□□□ 0.75
COL13A1-203ENST00000398969 IL17RELQ6ZVW7 336 aa19.72■□□□□ 0.75
COL13A1-203ENST00000398969 LINC01546A6NGU7 62 aa19.72■□□□□ 0.75
COL13A1-203ENST00000398969 UBE2E1P51965 193 aa19.72■□□□□ 0.75
COL13A1-203ENST00000398969 CCDC140Q96MF4 163 aa19.72■□□□□ 0.75
COL13A1-203ENST00000398969 IGHV3-66A0A0C4DH42 116 aa19.71■□□□□ 0.75
COL13A1-203ENST00000398969 GOSR1O95249 250 aa19.71■□□□□ 0.75
COL13A1-203ENST00000398969 SLC50A1Q9BRV3 221 aa19.71■□□□□ 0.75
COL13A1-203ENST00000398969 TCTAP57738 103 aa19.71■□□□□ 0.75
COL13A1-203ENST00000398969 C7orf71A4D174 169 aa19.7■□□□□ 0.74
COL13A1-203ENST00000398969 SMAD7O15105 426 aaKnown RBP19.7■□□□□ 0.74
COL13A1-203ENST00000398969 WFDC3Q8IUB2 231 aa19.7■□□□□ 0.74
COL13A1-203ENST00000398969 PEF1Q9UBV8 284 aaKnown RBP19.7■□□□□ 0.74
COL13A1-203ENST00000398969 TRAV8-6A0A0B4J262 113 aa19.69■□□□□ 0.74
COL13A1-203ENST00000398969 CLEC19AQ6UXS0 136 aa19.69■□□□□ 0.74
COL13A1-203ENST00000398969 PPIFP30405 207 aaKnown RBP19.69■□□□□ 0.74
COL13A1-203ENST00000398969 G3V318 75 aa19.68■□□□□ 0.74
COL13A1-203ENST00000398969 TNFRSF6BO95407 300 aa19.68■□□□□ 0.74
COL13A1-203ENST00000398969 SAA4P35542 130 aa19.68■□□□□ 0.74
COL13A1-203ENST00000398969 DKK2Q9UBU2 259 aa19.68■□□□□ 0.74
COL13A1-203ENST00000398969 AGPAT4-IT1Q9H0P7 198 aa19.68■□□□□ 0.74
COL13A1-203ENST00000398969 IGHV3OR16-13A0A075B7E8 117 aa19.67■□□□□ 0.74
COL13A1-203ENST00000398969 IGHV3-74A0A0B4J1X5 117 aa19.67■□□□□ 0.74
COL13A1-203ENST00000398969 IGKV3D-20A0A0C4DH25 116 aa19.67■□□□□ 0.74
COL13A1-203ENST00000398969 LINC01548A6NM66 108 aa19.67■□□□□ 0.74
COL13A1-203ENST00000398969 OR9G4Q8NGQ1 327 aa19.67■□□□□ 0.74
COL13A1-203ENST00000398969 C18orf15Q96N68 181 aa19.67■□□□□ 0.74
COL13A1-203ENST00000398969 WNK2Q9Y3S1 2297 aa19.67■□□□□ 0.74
COL13A1-203ENST00000398969 CACNA1BQ00975 2339 aa19.67■□□□□ 0.74
COL13A1-203ENST00000398969 TRAV8-2A0A0B4J237 113 aa19.66■□□□□ 0.74
COL13A1-203ENST00000398969 EVI2AP22794 236 aa19.66■□□□□ 0.74
COL13A1-203ENST00000398969 LEPP41159 167 aa19.66■□□□□ 0.74
COL13A1-203ENST00000398969 NXT2Q9NPJ8 142 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms