RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 PIP4P1Q86T03 277 aa13.48□□□□□ -0.25
EWSR1-206ENST00000397938 SPAARA0A1B0GVQ0 90 aa13.48□□□□□ -0.25
EWSR1-206ENST00000397938 SCGB1A1P11684 91 aa13.48□□□□□ -0.25
EWSR1-206ENST00000397938 KALRNO60229 2985 aa13.48□□□□□ -0.25
EWSR1-206ENST00000397938 TMEM8BA6NDV4 472 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 E7EQL1 145 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 TMEM11P17152 192 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 DEFB124Q8NES8 71 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 DCHS1Q96JQ0 3298 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 NDUFA3O95167 84 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 GATA1P15976 413 aaPredicted RBP13.47□□□□□ -0.25
EWSR1-206ENST00000397938 HLA-DMBP28068 263 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 Q8N8P6 123 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 SMAD5-AS1Q9Y6J3 95 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 IGLV2-18A0A075B6J9 118 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 AZU1P20160 251 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 IGFL4Q6B9Z1 124 aa13.47□□□□□ -0.25
EWSR1-206ENST00000397938 FABP5P3A8MUU1 101 aa13.46□□□□□ -0.25
EWSR1-206ENST00000397938 IGLL5B9A064 214 aa13.46□□□□□ -0.25
EWSR1-206ENST00000397938 NPBQ8NG41 125 aa13.46□□□□□ -0.25
EWSR1-206ENST00000397938 SPANXB1Q9NS25 103 aaPredicted RBP13.46□□□□□ -0.25
EWSR1-206ENST00000397938 C21orf62Q9NYP8 219 aa13.46□□□□□ -0.25
EWSR1-206ENST00000397938 DMXL2Q8TDJ6 3036 aa13.46□□□□□ -0.25
EWSR1-206ENST00000397938 F8W1H4 67 aa13.46□□□□□ -0.26
EWSR1-206ENST00000397938 FOXI2Q6ZQN5 318 aa13.46□□□□□ -0.26
EWSR1-206ENST00000397938 SIGMAR1Q99720 223 aa13.46□□□□□ -0.26
EWSR1-206ENST00000397938 GTSF1LQ9H1H1 148 aa13.46□□□□□ -0.26
EWSR1-206ENST00000397938 COLQQ9Y215 455 aaPredicted RBP13.46□□□□□ -0.26
EWSR1-206ENST00000397938 CFHR4Q92496 578 aa13.45□□□□□ -0.26
EWSR1-206ENST00000397938 GOSR1O95249 250 aa13.45□□□□□ -0.26
EWSR1-206ENST00000397938 TAL2Q16559 108 aa13.45□□□□□ -0.26
EWSR1-206ENST00000397938 CLEC2AQ6UVW9 174 aa13.45□□□□□ -0.26
EWSR1-206ENST00000397938 DTX2Q86UW9 622 aa13.45□□□□□ -0.26
EWSR1-206ENST00000397938 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
EWSR1-206ENST00000397938 TRAV40A0A0B4J280 105 aa13.44□□□□□ -0.26
EWSR1-206ENST00000397938 LYNX1G3V0Z9 82 aa13.44□□□□□ -0.26
EWSR1-206ENST00000397938 K7EMI3 77 aa13.44□□□□□ -0.26
EWSR1-206ENST00000397938 LYNX1P0DP58 116 aa13.44□□□□□ -0.26
EWSR1-206ENST00000397938 WFDC2Q14508 124 aa13.44□□□□□ -0.26
EWSR1-206ENST00000397938 ZNF479Q96JC4 524 aa13.44□□□□□ -0.26
EWSR1-206ENST00000397938 MRPL35Q9NZE8 188 aaKnown RBP13.44□□□□□ -0.26
EWSR1-206ENST00000397938 TSSC4Q9Y5U2 329 aaPredicted RBP13.44□□□□□ -0.26
EWSR1-206ENST00000397938 DYNAPQ8N1N2 210 aa13.44□□□□□ -0.26
EWSR1-206ENST00000397938 MAPKAPK5-AS1Q8N8E1 139 aa13.44□□□□□ -0.26
EWSR1-206ENST00000397938 IGHV3-23P01764 117 aa13.43□□□□□ -0.26
EWSR1-206ENST00000397938 C5orf64Q2M2E5 130 aa13.43□□□□□ -0.26
EWSR1-206ENST00000397938 CD300EQ496F6 205 aaPredicted RBP13.43□□□□□ -0.26
EWSR1-206ENST00000397938 ONECUT1Q9UBC0 465 aa13.43□□□□□ -0.26
EWSR1-206ENST00000397938 PPIFP30405 207 aaKnown RBP13.43□□□□□ -0.26
EWSR1-206ENST00000397938 ERCC8Q13216 396 aa13.43□□□□□ -0.26
EWSR1-206ENST00000397938 GAGE12HA6NDE8 117 aa13.42□□□□□ -0.26
EWSR1-206ENST00000397938 J3QR89 54 aa13.42□□□□□ -0.26
EWSR1-206ENST00000397938 C12orf74Q32Q52 190 aa13.42□□□□□ -0.26
EWSR1-206ENST00000397938 IGFBPL1Q8WX77 278 aa13.42□□□□□ -0.26
EWSR1-206ENST00000397938 DPM3Q9P2X0 92 aa13.42□□□□□ -0.26
EWSR1-206ENST00000397938 PRRG2O14669 202 aa13.42□□□□□ -0.26
EWSR1-206ENST00000397938 SMAGPQ0VAQ4 97 aa13.42□□□□□ -0.26
EWSR1-206ENST00000397938 IGF2-ASQ6U949 168 aa13.42□□□□□ -0.26
EWSR1-206ENST00000397938 TTC9CQ8N5M4 171 aa13.42□□□□□ -0.26
EWSR1-206ENST00000397938 ARPC1AQ92747 370 aa13.42□□□□□ -0.26
EWSR1-206ENST00000397938 NDPQ00604 133 aa13.41□□□□□ -0.26
EWSR1-206ENST00000397938 MYOZ3Q8TDC0 251 aa13.41□□□□□ -0.26
EWSR1-206ENST00000397938 SPATA25Q9BR10 227 aa13.41□□□□□ -0.26
EWSR1-206ENST00000397938 CEP250Q9BV73 2442 aa13.4□□□□□ -0.26
EWSR1-206ENST00000397938 A0A087WX48 190 aa13.4□□□□□ -0.26
EWSR1-206ENST00000397938 PRSS47A8MTI9 375 aa13.4□□□□□ -0.26
EWSR1-206ENST00000397938 PRAC2D3DTV9 90 aa13.4□□□□□ -0.26
EWSR1-206ENST00000397938 H3BMG7 143 aa13.4□□□□□ -0.26
EWSR1-206ENST00000397938 TRGV3P03979 118 aa13.4□□□□□ -0.26
EWSR1-206ENST00000397938 CTSGP08311 255 aa13.4□□□□□ -0.26
EWSR1-206ENST00000397938 LAGE3Q14657 143 aa13.4□□□□□ -0.26
EWSR1-206ENST00000397938 ZNF672Q499Z4 452 aaPredicted RBP13.4□□□□□ -0.26
EWSR1-206ENST00000397938 B9A039 149 aa13.4□□□□□ -0.26
EWSR1-206ENST00000397938 NRACQ8N912 160 aa13.4□□□□□ -0.26
EWSR1-206ENST00000397938 IGKV3D-20A0A0C4DH25 116 aa13.39□□□□□ -0.27
EWSR1-206ENST00000397938 ZNF207O43670 478 aaKnown RBP13.39□□□□□ -0.27
EWSR1-206ENST00000397938 HES1Q14469 280 aa13.39□□□□□ -0.27
EWSR1-206ENST00000397938 IL17RELQ6ZVW7 336 aa13.39□□□□□ -0.27
EWSR1-206ENST00000397938 OR11H6Q8NGC7 330 aa13.39□□□□□ -0.27
EWSR1-206ENST00000397938 SH3BGRL2Q9UJC5 107 aa13.39□□□□□ -0.27
EWSR1-206ENST00000397938 SCGB2A1O75556 95 aa13.39□□□□□ -0.27
EWSR1-206ENST00000397938 LY6G5BQ8NDX9 201 aa13.39□□□□□ -0.27
EWSR1-206ENST00000397938 SH2D6Q7Z4S9 175 aa13.38□□□□□ -0.27
EWSR1-206ENST00000397938 SPAG8Q99932 426 aaPredicted RBP13.38□□□□□ -0.27
EWSR1-206ENST00000397938 AGRNO00468 2067 aa13.38□□□□□ -0.27
EWSR1-206ENST00000397938 TRBV7-3A0A075B6L6 115 aa13.38□□□□□ -0.27
EWSR1-206ENST00000397938 RBAKDNA6NC62 111 aa13.38□□□□□ -0.27
EWSR1-206ENST00000397938 PLNP26678 52 aa13.38□□□□□ -0.27
EWSR1-206ENST00000397938 RRN3P1Q2M238 152 aa13.38□□□□□ -0.27
EWSR1-206ENST00000397938 ETDBQ3ZM63 59 aa13.38□□□□□ -0.27
EWSR1-206ENST00000397938 ZNF502Q8TBZ5 544 aa13.38□□□□□ -0.27
EWSR1-206ENST00000397938 HIST1H4GQ99525 98 aa13.38□□□□□ -0.27
EWSR1-206ENST00000397938 C11orf21Q9P2W6 132 aa13.38□□□□□ -0.27
EWSR1-206ENST00000397938 PRO0461Q9UI25 63 aa13.37□□□□□ -0.27
EWSR1-206ENST00000397938 ADGRG4Q8IZF6 3080 aa13.37□□□□□ -0.27
EWSR1-206ENST00000397938 ZNF318Q5VUA4 2279 aa13.37□□□□□ -0.27
EWSR1-206ENST00000397938 IGHV3OR16-8A0A075B7F1 116 aa13.37□□□□□ -0.27
EWSR1-206ENST00000397938 AMTNQ6UX39 209 aa13.37□□□□□ -0.27
EWSR1-206ENST00000397938 DEFB123Q8N688 67 aa13.37□□□□□ -0.27
EWSR1-206ENST00000397938 PCNX1Q96RV3 2341 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms