RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 MCEEQ96PE7 176 aa2.52□□□□□ -2.01
CEP290-202ENST00000397838 VPS25Q9BRG1 176 aa2.52□□□□□ -2.01
CEP290-202ENST00000397838 LPAR5Q9H1C0 372 aa2.52□□□□□ -2.01
CEP290-202ENST00000397838 PIK3C2AO00443 1686 aa2.52□□□□□ -2.01
CEP290-202ENST00000397838 RAPGEF6Q8TEU7 1601 aa2.52□□□□□ -2.01
CEP290-202ENST00000397838 ROCK2O75116 1388 aaKnown RBP2.52□□□□□ -2.01
CEP290-202ENST00000397838 LOC107984156A0A0G2JMH3 177 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 HBDP02042 147 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 CD14P08571 375 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 TPT1P13693 172 aaKnown RBP2.51□□□□□ -2.01
CEP290-202ENST00000397838 AKR1D1P51857 326 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 BLCAPP62952 87 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 ARL17AQ8IVW1 177 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 LINC00269Q8N2A0 174 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 COL6A3P12111 3177 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 RFX7Q2KHR2 1363 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 M0R129 80 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 S100A1P23297 94 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 TSC22D3Q99576 134 aa2.51□□□□□ -2.01
CEP290-202ENST00000397838 FAM236AA0A1B0GUQ0 79 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 FAM236BA0A1B0GV22 79 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 M0R2Z0 102 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 SRP9P49458 86 aaKnown RBP2.5□□□□□ -2.01
CEP290-202ENST00000397838 ZNF833PQ6ZTB9 187 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 PAIP2BQ9ULR5 123 aaKnown RBP2.5□□□□□ -2.01
CEP290-202ENST00000397838 UQCRHLA0A096LP55 91 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.5□□□□□ -2.01
CEP290-202ENST00000397838 GPX1P07203 203 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 UQCRHP07919 91 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 ZCCHC23Q6ZST2 131 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 ARPINQ7Z6K5 226 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 OR4C6Q8NH72 309 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 DNAJC15Q9Y5T4 150 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 SETD2Q9BYW2 2564 aaPredicted RBP2.5□□□□□ -2.01
CEP290-202ENST00000397838 HIVEP2P31629 2446 aa2.5□□□□□ -2.01
CEP290-202ENST00000397838 UQCRQO14949 82 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 LYRM1O43325 122 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 ERC2-IT1O76042 136 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 MIR22HGQ0VDD5 57 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 TMEM91Q6ZNR0 172 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 TP53RKQ96S44 253 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 PLXNA4Q9HCM2 1894 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 ERICH3Q5RHP9 1530 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 A0A087WSZ3 146 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 EVI2AP22794 236 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 CST11Q9H112 138 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 COMMD3Q9UBI1 195 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 LAMB4A4D0S4 1761 aa2.49□□□□□ -2.01
CEP290-202ENST00000397838 CDK5RAP2Q96SN8 1893 aa2.48□□□□□ -2.01
CEP290-202ENST00000397838 MUC4Q99102 2169 aa2.48□□□□□ -2.01
CEP290-202ENST00000397838 RRBP1Q9P2E9 1410 aaKnown RBP2.48□□□□□ -2.01
CEP290-202ENST00000397838 CCL16O15467 120 aa2.48□□□□□ -2.01
CEP290-202ENST00000397838 CXCL8P10145 99 aa2.48□□□□□ -2.01
CEP290-202ENST00000397838 FOXI2Q6ZQN5 318 aa2.48□□□□□ -2.01
CEP290-202ENST00000397838 TPT1P8Q9HAU6 139 aa2.48□□□□□ -2.01
CEP290-202ENST00000397838 COL24A1Q17RW2 1714 aa2.48□□□□□ -2.01
CEP290-202ENST00000397838 C3orf85A0A1B0GTC6 90 aa2.47□□□□□ -2.01
CEP290-202ENST00000397838 CIRBPQ14011 172 aaKnown RBP2.47□□□□□ -2.01
CEP290-202ENST00000397838 ANKRD17O75179 2603 aaKnown RBP2.47□□□□□ -2.01
CEP290-202ENST00000397838 WDR7Q9Y4E6 1490 aa2.47□□□□□ -2.01
CEP290-202ENST00000397838 ZNF736B4DX44 427 aaPredicted RBP2.47□□□□□ -2.01
CEP290-202ENST00000397838 CCL4P13236 92 aa2.47□□□□□ -2.01
CEP290-202ENST00000397838 HAGHLQ6PII5 290 aaPredicted RBP2.47□□□□□ -2.01
CEP290-202ENST00000397838 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CEP290-202ENST00000397838 CNTLNQ9NXG0 1405 aa2.47□□□□□ -2.01
CEP290-202ENST00000397838 HELZ2Q9BYK8 2649 aaKnown RBP2.46□□□□□ -2.01
CEP290-202ENST00000397838 COL1A1P02452 1464 aaPredicted RBP2.46□□□□□ -2.02
CEP290-202ENST00000397838 TRGV2A0A075B6R0 118 aa2.46□□□□□ -2.02
CEP290-202ENST00000397838 QRFPP83859 136 aa2.46□□□□□ -2.02
CEP290-202ENST00000397838 GKN2Q86XP6 184 aa2.46□□□□□ -2.02
CEP290-202ENST00000397838 OR4S1Q8NGB4 309 aa2.46□□□□□ -2.02
CEP290-202ENST00000397838 PATE1Q8WXA2 126 aa2.46□□□□□ -2.02
CEP290-202ENST00000397838 CR1P17927 2039 aa2.46□□□□□ -2.02
CEP290-202ENST00000397838 A0A096LPI6 279 aa2.46□□□□□ -2.02
CEP290-202ENST00000397838 TRACP01848 142 aa2.46□□□□□ -2.02
CEP290-202ENST00000397838 CD3DP04234 171 aa2.46□□□□□ -2.02
CEP290-202ENST00000397838 CECR2Q9BXF3 1484 aa2.45□□□□□ -2.02
CEP290-202ENST00000397838 OTOSQ8NHW6 89 aa2.45□□□□□ -2.02
CEP290-202ENST00000397838 CDC42SE1Q9NRR8 79 aa2.45□□□□□ -2.02
CEP290-202ENST00000397838 K7ERU9 68 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 HLA-DRB4P13762 266 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 ERG28Q9UKR5 140 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 SOX21Q9Y651 276 aaPredicted RBP2.44□□□□□ -2.02
CEP290-202ENST00000397838 HLA-DRB4X5D2U9 266 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 PCBD1P61457 104 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 RPS25P62851 125 aaKnown RBP2.44□□□□□ -2.02
CEP290-202ENST00000397838 CLLU1Q5K131 121 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 C3orf62Q6ZUJ4 267 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 CTAGE3PQ8IX95 158 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 CHD8Q9HCK8 2581 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 ARHGAP31Q2M1Z3 1444 aa2.44□□□□□ -2.02
CEP290-202ENST00000397838 EFCAB10A6NFE3 127 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 NEDD8Q15843 81 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 SPRNQ5BIV9 151 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.43□□□□□ -2.02
CEP290-202ENST00000397838 OR5AK2Q8NH90 309 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 LSM2Q9Y333 95 aaKnown RBP2.43□□□□□ -2.02
CEP290-202ENST00000397838 FANCMQ8IYD8 2048 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms