RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ZNF562Q6V9R5 426 aa18.8■□□□□ 0.6
CSNK1E-203ENST00000396832 TRBV25-1A0A075B6N4 114 aa18.8■□□□□ 0.6
CSNK1E-203ENST00000396832 F8W1H4 67 aa18.8■□□□□ 0.6
CSNK1E-203ENST00000396832 TCF15Q12870 199 aa18.8■□□□□ 0.6
CSNK1E-203ENST00000396832 TWIST1Q15672 202 aa18.8■□□□□ 0.6
CSNK1E-203ENST00000396832 PIP4P1Q86T03 277 aa18.8■□□□□ 0.6
CSNK1E-203ENST00000396832 SHANK2-AS3Q9BTD1 123 aa18.8■□□□□ 0.6
CSNK1E-203ENST00000396832 SPTBN1Q01082 2364 aaKnown RBP18.79■□□□□ 0.6
CSNK1E-203ENST00000396832 IGHV3-35A0A0C4DH35 117 aa18.79■□□□□ 0.6
CSNK1E-203ENST00000396832 SH2D1AO60880 128 aa18.79■□□□□ 0.6
CSNK1E-203ENST00000396832 ODF1Q14990 250 aa18.79■□□□□ 0.6
CSNK1E-203ENST00000396832 J3QR89 54 aa18.79■□□□□ 0.6
CSNK1E-203ENST00000396832 CRYGBP07316 175 aa18.79■□□□□ 0.6
CSNK1E-203ENST00000396832 LYPD1Q8N2G4 141 aa18.79■□□□□ 0.6
CSNK1E-203ENST00000396832 ANKHD1Q8IWZ3 2542 aaKnown RBP18.79■□□□□ 0.6
CSNK1E-203ENST00000396832 LY6HO94772 140 aa18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 PRSS1P07477 247 aa18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 FOXI2Q6ZQN5 318 aa18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 CEND1Q8N111 149 aa18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 Q8TAT8 98 aa18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 IGKV2-40A0A087WW87 121 aaPredicted RBP18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 BUB1B-PAK6H3BSN5 160 aa18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 TNFRSF13BO14836 293 aaPredicted RBP18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 IGKV2D-40P01614 121 aaPredicted RBP18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 SH2D6Q7Z4S9 175 aa18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 GTSCR1Q86UQ5 136 aa18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 ZMAT4Q9H898 229 aa18.78■□□□□ 0.6
CSNK1E-203ENST00000396832 E9PLD3 99 aa18.77■□□□□ 0.6
CSNK1E-203ENST00000396832 CCDC144NLQ6NUI1 221 aa18.77■□□□□ 0.6
CSNK1E-203ENST00000396832 E7EQL1 145 aa18.77■□□□□ 0.6
CSNK1E-203ENST00000396832 LEPP41159 167 aa18.77■□□□□ 0.6
CSNK1E-203ENST00000396832 TM2D2Q9BX73 214 aa18.77■□□□□ 0.6
CSNK1E-203ENST00000396832 AKAP6Q13023 2319 aa18.77■□□□□ 0.6
CSNK1E-203ENST00000396832 K7EIM0 57 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 SVIPQ8NHG7 77 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 ONECUT1Q9UBC0 465 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 IGLL5B9A064 214 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 H3BMG7 143 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 H3BRN7 92 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 ETDBQ3ZM63 59 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 PSMG4Q5JS54 123 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 RNF125Q96EQ8 232 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 SPAG8Q99932 426 aaPredicted RBP18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 TIMM23O14925 209 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 IGLV1-47P01700 117 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 IGKCP01834 107 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 Q5PR19 223 aa18.76■□□□□ 0.59
CSNK1E-203ENST00000396832 C8orf31Q8N9H6 132 aa18.75■□□□□ 0.59
CSNK1E-203ENST00000396832 ARPC1AQ92747 370 aa18.75■□□□□ 0.59
CSNK1E-203ENST00000396832 SPATA25Q9BR10 227 aa18.75■□□□□ 0.59
CSNK1E-203ENST00000396832 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.75■□□□□ 0.59
CSNK1E-203ENST00000396832 MAP1LC3AQ9H492 121 aa18.75■□□□□ 0.59
CSNK1E-203ENST00000396832 SHISA9B4DS77 424 aa18.74■□□□□ 0.59
CSNK1E-203ENST00000396832 PRRG2O14669 202 aa18.74■□□□□ 0.59
CSNK1E-203ENST00000396832 ASCL5Q7RTU5 278 aa18.74■□□□□ 0.59
CSNK1E-203ENST00000396832 ZNF491Q8N8L2 437 aa18.74■□□□□ 0.59
CSNK1E-203ENST00000396832 GAS8-AS1O95177 125 aa18.74■□□□□ 0.59
CSNK1E-203ENST00000396832 PRR30Q53SZ7 412 aaPredicted RBP18.74■□□□□ 0.59
CSNK1E-203ENST00000396832 TMEM190Q8WZ59 177 aa18.74■□□□□ 0.59
CSNK1E-203ENST00000396832 ZNF479Q96JC4 524 aa18.74■□□□□ 0.59
CSNK1E-203ENST00000396832 HES1Q14469 280 aa18.73■□□□□ 0.59
CSNK1E-203ENST00000396832 ZC2HC1BQ5TFG8 222 aa18.73■□□□□ 0.59
CSNK1E-203ENST00000396832 RALYQ9UKM9 306 aaKnown RBP18.73■□□□□ 0.59
CSNK1E-203ENST00000396832 EGR2P11161 476 aaPredicted RBP18.73■□□□□ 0.59
CSNK1E-203ENST00000396832 EVI2AP22794 236 aa18.73■□□□□ 0.59
CSNK1E-203ENST00000396832 FCER1GP30273 86 aa18.73■□□□□ 0.59
CSNK1E-203ENST00000396832 MRPS12O15235 138 aaKnown RBP18.72■□□□□ 0.59
CSNK1E-203ENST00000396832 HLA-DMBP28068 263 aa18.72■□□□□ 0.59
CSNK1E-203ENST00000396832 AMTNQ6UX39 209 aa18.72■□□□□ 0.59
CSNK1E-203ENST00000396832 FOXC2Q99958 501 aa18.72■□□□□ 0.59
CSNK1E-203ENST00000396832 MSRB1Q9NZV6 116 aa18.72■□□□□ 0.59
CSNK1E-203ENST00000396832 RAB9AP51151 201 aa18.72■□□□□ 0.59
CSNK1E-203ENST00000396832 KLRD1Q13241 179 aa18.72■□□□□ 0.59
CSNK1E-203ENST00000396832 IGFL3Q6UXB1 125 aa18.72■□□□□ 0.59
CSNK1E-203ENST00000396832 AAMDCQ9H7C9 122 aa18.72■□□□□ 0.59
CSNK1E-203ENST00000396832 SPTBN4Q9H254 2564 aa18.71■□□□□ 0.59
CSNK1E-203ENST00000396832 NPIPB5A8MRT5 1133 aa18.71■□□□□ 0.59
CSNK1E-203ENST00000396832 MTURNQ8N3F0 131 aa18.71■□□□□ 0.59
CSNK1E-203ENST00000396832 RNF185Q96GF1 192 aa18.7■□□□□ 0.58
CSNK1E-203ENST00000396832 TMEM8BA6NDV4 472 aa18.7■□□□□ 0.58
CSNK1E-203ENST00000396832 VSTM5A8MXK1 200 aa18.7■□□□□ 0.58
CSNK1E-203ENST00000396832 DPM2O94777 84 aa18.7■□□□□ 0.58
CSNK1E-203ENST00000396832 CKS1BP61024 79 aa18.7■□□□□ 0.58
CSNK1E-203ENST00000396832 SRSF1Q07955 248 aaKnown RBP eCLIP18.69■□□□□ 0.581e-6■□□□□ 11.3
CSNK1E-203ENST00000396832 C12orf74Q32Q52 190 aa18.69■□□□□ 0.58
CSNK1E-203ENST00000396832 GFRALQ6UXV0 394 aa18.69■□□□□ 0.58
CSNK1E-203ENST00000396832 MAPKAPK5-AS1Q8N8E1 139 aa18.69■□□□□ 0.58
CSNK1E-203ENST00000396832 TMEM160Q9NX00 188 aa18.69■□□□□ 0.58
CSNK1E-203ENST00000396832 IGF2RP11717 2491 aa18.69■□□□□ 0.58
CSNK1E-203ENST00000396832 PPIFP30405 207 aaKnown RBP18.69■□□□□ 0.58
CSNK1E-203ENST00000396832 KAAG1Q9UBP8 84 aa18.69■□□□□ 0.58
CSNK1E-203ENST00000396832 CELSR1Q9NYQ6 3014 aa18.68■□□□□ 0.58
CSNK1E-203ENST00000396832 INSL3P51460 131 aa18.68■□□□□ 0.58
CSNK1E-203ENST00000396832 GAGE13Q4V321 117 aa18.68■□□□□ 0.58
CSNK1E-203ENST00000396832 HRNRQ86YZ3 2850 aaPredicted RBP18.68■□□□□ 0.58
CSNK1E-203ENST00000396832 LINC01546A6NGU7 62 aa18.68■□□□□ 0.58
CSNK1E-203ENST00000396832 TRAV40A0A0B4J280 105 aa18.67■□□□□ 0.58
CSNK1E-203ENST00000396832 TNFRSF6BO95407 300 aa18.67■□□□□ 0.58
CSNK1E-203ENST00000396832 ZNF80P51504 273 aaPredicted RBP18.67■□□□□ 0.58
CSNK1E-203ENST00000396832 TMEM158Q8WZ71 300 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms