RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 BUB1B-PAK6H3BSN5 160 aa14.22□□□□□ -0.13
HERPUD2-202ENST00000396081 C3orf36Q3SXR2 165 aa14.22□□□□□ -0.13
HERPUD2-202ENST00000396081 LCNL1Q6ZST4 164 aa14.22□□□□□ -0.13
HERPUD2-202ENST00000396081 LYNX1G3V0Z9 82 aa14.22□□□□□ -0.13
HERPUD2-202ENST00000396081 LYNX1P0DP58 116 aa14.22□□□□□ -0.13
HERPUD2-202ENST00000396081 ASCL5Q7RTU5 278 aa14.22□□□□□ -0.13
HERPUD2-202ENST00000396081 NUP37Q8NFH4 326 aa14.22□□□□□ -0.13
HERPUD2-202ENST00000396081 HIGD1BQ9P298 99 aa14.22□□□□□ -0.13
HERPUD2-202ENST00000396081 PIEZO2Q9H5I5 2752 aa14.22□□□□□ -0.13
HERPUD2-202ENST00000396081 SPTBN2O15020 2390 aa14.22□□□□□ -0.13
HERPUD2-202ENST00000396081 IGLL5B9A064 214 aa14.21□□□□□ -0.13
HERPUD2-202ENST00000396081 BMI1P35226 326 aa14.21□□□□□ -0.13
HERPUD2-202ENST00000396081 WFDC12Q8WWY7 111 aa14.21□□□□□ -0.13
HERPUD2-202ENST00000396081 HIST1H4GQ99525 98 aa14.21□□□□□ -0.13
HERPUD2-202ENST00000396081 GFRALQ6UXV0 394 aa14.21□□□□□ -0.13
HERPUD2-202ENST00000396081 PHLDA1Q8WV24 401 aaPredicted RBP14.21□□□□□ -0.13
HERPUD2-202ENST00000396081 RNF185Q96GF1 192 aa14.21□□□□□ -0.13
HERPUD2-202ENST00000396081 SPANXB1Q9NS25 103 aaPredicted RBP14.21□□□□□ -0.13
HERPUD2-202ENST00000396081 MRPL35Q9NZE8 188 aaKnown RBP14.21□□□□□ -0.13
HERPUD2-202ENST00000396081 MAPKAPK5-AS1Q8N8E1 139 aa14.21□□□□□ -0.14
HERPUD2-202ENST00000396081 LAMA5O15230 3695 aa14.2□□□□□ -0.14
HERPUD2-202ENST00000396081 HES1Q14469 280 aa14.2□□□□□ -0.14
HERPUD2-202ENST00000396081 FOXI2Q6ZQN5 318 aa14.2□□□□□ -0.14
HERPUD2-202ENST00000396081 NXT2Q9NPJ8 142 aaKnown RBP14.2□□□□□ -0.14
HERPUD2-202ENST00000396081 C16orf97H3BN30 126 aa14.19□□□□□ -0.14
HERPUD2-202ENST00000396081 TIMM23O14925 209 aa14.19□□□□□ -0.14
HERPUD2-202ENST00000396081 CEACAM4O75871 244 aa14.19□□□□□ -0.14
HERPUD2-202ENST00000396081 NDUFA3O95167 84 aa14.19□□□□□ -0.14
HERPUD2-202ENST00000396081 IGLV1-47P01700 117 aa14.19□□□□□ -0.14
HERPUD2-202ENST00000396081 SPAG8Q99932 426 aaPredicted RBP14.19□□□□□ -0.14
HERPUD2-202ENST00000396081 ERCC8Q13216 396 aa14.19□□□□□ -0.14
HERPUD2-202ENST00000396081 PDE6HQ13956 83 aa14.19□□□□□ -0.14
HERPUD2-202ENST00000396081 A0A1B0GV72 72 aa14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 E9PLD3 99 aa14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 IGLC6P0CF74 106 aa14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 C12orf74Q32Q52 190 aa14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 RNASE6Q93091 150 aaKnown RBP14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 RALYQ9UKM9 306 aaKnown RBP14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 UFC1Q9Y3C8 167 aa14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 TNRC18O15417 2968 aaPredicted RBP14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 F8W1H4 67 aa14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 CEACAM3P40198 252 aa14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 INSL3P51460 131 aa14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 MYOZ3Q8TDC0 251 aa14.18□□□□□ -0.14
HERPUD2-202ENST00000396081 ATP5G2Q06055 141 aa14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 TTC9CQ8N5M4 171 aa14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 TM2D2Q9BX73 214 aa14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 CSMD1Q96PZ7 3565 aa14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 TRAV26-2A0A0B4J265 109 aa14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 TMEM238LA0A1B0GVL6 79 aa14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 TNFRSF13BO14836 293 aaPredicted RBP14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 RPL7P18124 248 aaKnown RBP14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 MFAP4P55083 255 aa14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 GAGE13Q4V321 117 aa14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 ZMAT4Q9H898 229 aa14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 ONECUT1Q9UBC0 465 aa14.17□□□□□ -0.14
HERPUD2-202ENST00000396081 ATP5LO75964 103 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 DTX2Q86UW9 622 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 SPAARA0A1B0GVQ0 90 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 CCDC144NLQ6NUI1 221 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 SFTA2Q6UW10 78 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 ATP6V0BQ99437 205 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 KLK15Q9H2R5 256 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 SPTBN1Q01082 2364 aaKnown RBP14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 CUL9Q8IWT3 2517 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 A0A1B0GWB2 263 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 FABP5P3A8MUU1 101 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 VSTM5A8MXK1 200 aa14.16□□□□□ -0.14
HERPUD2-202ENST00000396081 BDP1A6H8Y1 2624 aa14.15□□□□□ -0.14
HERPUD2-202ENST00000396081 EFNA4P52798 201 aa14.15□□□□□ -0.14
HERPUD2-202ENST00000396081 PIFOQ8TCI5 191 aa14.15□□□□□ -0.14
HERPUD2-202ENST00000396081 RAB1BQ9H0U4 201 aa14.15□□□□□ -0.14
HERPUD2-202ENST00000396081 PRRG2O14669 202 aa14.15□□□□□ -0.14
HERPUD2-202ENST00000396081 SHISA9B4DS77 424 aa14.14□□□□□ -0.15
HERPUD2-202ENST00000396081 DMXL1Q9Y485 3027 aa14.14□□□□□ -0.15
HERPUD2-202ENST00000396081 TRGV3P03979 118 aa14.14□□□□□ -0.15
HERPUD2-202ENST00000396081 PSMG4Q5JS54 123 aa14.14□□□□□ -0.15
HERPUD2-202ENST00000396081 C21orf62Q9NYP8 219 aa14.14□□□□□ -0.15
HERPUD2-202ENST00000396081 IGHV3OR16-13A0A075B7E8 117 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 IGHV3-74A0A0B4J1X5 117 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 SCGB1A1P11684 91 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 PLA2G2CQ5R387 149 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 KAAG1Q9UBP8 84 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 SMPXQ9UHP9 88 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 NBASA2RRP1 2371 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 NCBP2LA6PVI3 153 aaKnown RBP14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 NBR2O15453 112 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 RAB9AP51151 201 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 DYNAPQ8N1N2 210 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 IGHV3-66A0A0C4DH42 116 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 PRAC2D3DTV9 90 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 CKS1BP61024 79 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 RNF182Q8N6D2 247 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 Q8N8P6 123 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 DEFB124Q8NES8 71 aa14.13□□□□□ -0.15
HERPUD2-202ENST00000396081 THBDP07204 575 aa14.12□□□□□ -0.15
HERPUD2-202ENST00000396081 SCGB2A2Q13296 93 aa14.12□□□□□ -0.15
HERPUD2-202ENST00000396081 CYSLTR1Q9Y271 337 aa14.12□□□□□ -0.15
HERPUD2-202ENST00000396081 IL17RELQ6ZVW7 336 aa14.12□□□□□ -0.15
HERPUD2-202ENST00000396081 TMEM190Q8WZ59 177 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms