RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 NDUFB8O95169 186 aa2.59□□□□□ -1.99
PHF3-202ENST00000393387 XGP55808 180 aa2.59□□□□□ -1.99
PHF3-202ENST00000393387 RPL39P62891 51 aaKnown RBP2.59□□□□□ -1.99
PHF3-202ENST00000393387 OPRPNQ99935 248 aaPredicted RBP2.59□□□□□ -1.99
PHF3-202ENST00000393387 PRSS22Q9GZN4 317 aa2.59□□□□□ -1.99
PHF3-202ENST00000393387 ESM1Q9NQ30 184 aa2.59□□□□□ -1.99
PHF3-202ENST00000393387 KAAG1Q9UBP8 84 aa2.59□□□□□ -1.99
PHF3-202ENST00000393387 Q9UF83 564 aa2.59□□□□□ -1.99
PHF3-202ENST00000393387 X6R8D5 127 aa2.59□□□□□ -1.99
PHF3-202ENST00000393387 ANKRD12Q6UB98 2062 aa2.59□□□□□ -1.99
PHF3-202ENST00000393387 BRD3OSQ6XYD6 125 aa2.59□□□□□ -2
PHF3-202ENST00000393387 Q6ZR03 302 aa2.59□□□□□ -2
PHF3-202ENST00000393387 VMO1Q7Z5L0 202 aa2.59□□□□□ -2
PHF3-202ENST00000393387 RREB1Q92766 1687 aa2.59□□□□□ -2
PHF3-202ENST00000393387 C15orf62A8K5M9 175 aa2.59□□□□□ -2
PHF3-202ENST00000393387 FOXS1O43638 330 aa2.59□□□□□ -2
PHF3-202ENST00000393387 EFNA2O43921 213 aa2.59□□□□□ -2
PHF3-202ENST00000393387 YPEL1O60688 119 aa2.59□□□□□ -2
PHF3-202ENST00000393387 SPINK1P00995 79 aa2.59□□□□□ -2
PHF3-202ENST00000393387 IGLV3-25P01717 112 aa2.59□□□□□ -2
PHF3-202ENST00000393387 CRYGAP11844 174 aa2.59□□□□□ -2
PHF3-202ENST00000393387 BSPH1Q075Z2 132 aa2.59□□□□□ -2
PHF3-202ENST00000393387 EBI3Q14213 229 aa2.59□□□□□ -2
PHF3-202ENST00000393387 MRPL53Q96EL3 112 aaKnown RBP2.59□□□□□ -2
PHF3-202ENST00000393387 C17orf77Q96MU5 243 aa2.59□□□□□ -2
PHF3-202ENST00000393387 YPEL2Q96QA6 119 aa2.59□□□□□ -2
PHF3-202ENST00000393387 IGKV1-9A0A0C4DH69 117 aa2.58□□□□□ -2
PHF3-202ENST00000393387 A0A0J9YXV3 536 aa2.58□□□□□ -2
PHF3-202ENST00000393387 PRR19A6NJB7 356 aa2.58□□□□□ -2
PHF3-202ENST00000393387 LMO7DNF2Z398 122 aa2.58□□□□□ -2
PHF3-202ENST00000393387 EIF4EBP2Q13542 120 aaPredicted RBP2.58□□□□□ -2
PHF3-202ENST00000393387 FAM222AQ5U5X8 452 aa2.58□□□□□ -2
PHF3-202ENST00000393387 TMEM200BQ69YZ2 307 aa2.58□□□□□ -2
PHF3-202ENST00000393387 ZIC4Q8N9L1 334 aa2.58□□□□□ -2
PHF3-202ENST00000393387 WFDC10AQ9H1F0 79 aa2.58□□□□□ -2
PHF3-202ENST00000393387 AKAP12Q02952 1782 aa2.58□□□□□ -2
PHF3-202ENST00000393387 IGLV3-16A0A075B6K0 115 aa2.58□□□□□ -2
PHF3-202ENST00000393387 PATE3B3GLJ2 98 aa2.58□□□□□ -2
PHF3-202ENST00000393387 YPEL3P61236 119 aaPredicted RBP2.58□□□□□ -2
PHF3-202ENST00000393387 C1orf158Q8N1D5 194 aa2.58□□□□□ -2
PHF3-202ENST00000393387 DCANP1Q8TF63 244 aa2.58□□□□□ -2
PHF3-202ENST00000393387 RHPN1-AS1Q9BWJ2 59 aa2.58□□□□□ -2
PHF3-202ENST00000393387 NALCNQ8IZF0 1738 aa2.58□□□□□ -2
PHF3-202ENST00000393387 A0A087WVE0 104 aa2.58□□□□□ -2
PHF3-202ENST00000393387 RNF5Q99942 180 aa2.58□□□□□ -2
PHF3-202ENST00000393387 TM2D2Q9BX73 214 aa2.58□□□□□ -2
PHF3-202ENST00000393387 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.58□□□□□ -2
PHF3-202ENST00000393387 OVOL3O00110 214 aa2.58□□□□□ -2
PHF3-202ENST00000393387 FRMD6-AS1P0C7T7 363 aa2.58□□□□□ -2
PHF3-202ENST00000393387 ZNF503Q96F45 646 aa2.58□□□□□ -2
PHF3-202ENST00000393387 RFPL3SP0C7P2 107 aa2.58□□□□□ -2
PHF3-202ENST00000393387 FOXF2Q12947 444 aa2.58□□□□□ -2
PHF3-202ENST00000393387 DEFB136Q30KP8 78 aa2.58□□□□□ -2
PHF3-202ENST00000393387 NDUFA11Q86Y39 141 aa2.58□□□□□ -2
PHF3-202ENST00000393387 CCDC140Q96MF4 163 aa2.58□□□□□ -2
PHF3-202ENST00000393387 DKK4Q9UBT3 224 aa2.58□□□□□ -2
PHF3-202ENST00000393387 IQGAP1P46940 1657 aa2.58□□□□□ -2
PHF3-202ENST00000393387 PREX1Q8TCU6 1659 aa2.58□□□□□ -2
PHF3-202ENST00000393387 TMEM131LA2VDJ0 1609 aa2.58□□□□□ -2
PHF3-202ENST00000393387 IGKV1-8A0A0C4DH67 115 aa2.58□□□□□ -2
PHF3-202ENST00000393387 MBD3L4A6NDZ8 208 aaPredicted RBP2.58□□□□□ -2
PHF3-202ENST00000393387 MBD3L3A6NE82 208 aaPredicted RBP2.58□□□□□ -2
PHF3-202ENST00000393387 MBD3L5A6NJ08 208 aaPredicted RBP2.58□□□□□ -2
PHF3-202ENST00000393387 COX7CP15954 63 aa2.58□□□□□ -2
PHF3-202ENST00000393387 CRIP2P52943 208 aaPredicted RBP2.58□□□□□ -2
PHF3-202ENST00000393387 Q6ZRM9 215 aa2.58□□□□□ -2
PHF3-202ENST00000393387 TRGV9Q99603 122 aa2.58□□□□□ -2
PHF3-202ENST00000393387 XAGE1AQ9HD64 81 aa2.58□□□□□ -2
PHF3-202ENST00000393387 C4AP0C0L4 1744 aa2.57□□□□□ -2
PHF3-202ENST00000393387 C4BP0C0L5 1744 aa2.57□□□□□ -2
PHF3-202ENST00000393387 XRN1Q8IZH2 1706 aaKnown RBP2.57□□□□□ -2
PHF3-202ENST00000393387 IGKV1-12A0A0C4DH73 117 aa2.57□□□□□ -2
PHF3-202ENST00000393387 C5orf63A6NC05 138 aa2.57□□□□□ -2
PHF3-202ENST00000393387 IGKV1D-12P01611 117 aa2.57□□□□□ -2
PHF3-202ENST00000393387 CSRP1P21291 193 aaKnown RBP2.57□□□□□ -2
PHF3-202ENST00000393387 TRIP6Q15654 476 aaKnown RBP2.57□□□□□ -2
PHF3-202ENST00000393387 TMEM14EPQ6UXP3 125 aa2.57□□□□□ -2
PHF3-202ENST00000393387 CAMK2N2Q96S95 79 aa2.57□□□□□ -2
PHF3-202ENST00000393387 LINC00312Q9Y6C7 94 aa2.57□□□□□ -2
PHF3-202ENST00000393387 MYO18AQ92614 2054 aaKnown RBP2.57□□□□□ -2
PHF3-202ENST00000393387 CITO14578 2027 aa2.57□□□□□ -2
PHF3-202ENST00000393387 GATA4P43694 442 aa2.57□□□□□ -2
PHF3-202ENST00000393387 NWD2Q9ULI1 1742 aa2.57□□□□□ -2
PHF3-202ENST00000393387 TM4SF5O14894 197 aa2.57□□□□□ -2
PHF3-202ENST00000393387 DIAPH2-AS1Q14236 149 aa2.57□□□□□ -2
PHF3-202ENST00000393387 PCOTHQ58A44 107 aa2.57□□□□□ -2
PHF3-202ENST00000393387 CEMP1Q6PRD7 247 aaPredicted RBP2.57□□□□□ -2
PHF3-202ENST00000393387 C9orf139Q6ZV77 190 aa2.57□□□□□ -2
PHF3-202ENST00000393387 SHANK2-AS3Q9BTD1 123 aa2.57□□□□□ -2
PHF3-202ENST00000393387 KIF13AQ9H1H9 1805 aa2.57□□□□□ -2
PHF3-202ENST00000393387 IGHV1-58A0A0C4DH39 117 aa2.57□□□□□ -2
PHF3-202ENST00000393387 BUB1B-PAK6H3BSN5 160 aa2.57□□□□□ -2
PHF3-202ENST00000393387 RNASE3P12724 160 aaKnown RBP2.57□□□□□ -2
PHF3-202ENST00000393387 PRR20EP86478 221 aa2.57□□□□□ -2
PHF3-202ENST00000393387 PRR20CP86479 221 aa2.57□□□□□ -2
PHF3-202ENST00000393387 PRR20DP86480 221 aa2.57□□□□□ -2
PHF3-202ENST00000393387 PRR20BP86481 221 aa2.57□□□□□ -2
PHF3-202ENST00000393387 PRR20AP86496 221 aa2.57□□□□□ -2
PHF3-202ENST00000393387 C10orf91Q5T1B1 145 aa2.57□□□□□ -2
PHF3-202ENST00000393387 C19orf48Q6RUI8 117 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms